RNA–Protein interactions for RNA: ENST00000477890.6

CPSF7-211, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,234 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-211ENST00000477890 CDC42BPGQ6DT37 1551 aa17.55■□□□□ 0.4
CPSF7-211ENST00000477890 RBM6P78332 1123 aaKnown RBP17.55■□□□□ 0.4
CPSF7-211ENST00000477890 MPHOSPH9Q99550 1183 aa17.55■□□□□ 0.4
CPSF7-211ENST00000477890 SPATA31E1Q6ZUB1 1445 aa17.55■□□□□ 0.4
CPSF7-211ENST00000477890 ESCO1Q5FWF5 840 aa17.54■□□□□ 0.4
CPSF7-211ENST00000477890 STK26Q9P289 416 aa17.54■□□□□ 0.4
CPSF7-211ENST00000477890 RGS12O14924 1447 aa17.54■□□□□ 0.4
CPSF7-211ENST00000477890 ANKRD30BQ9BXX2 1392 aa17.53■□□□□ 0.4
CPSF7-211ENST00000477890 WAPLQ7Z5K2 1190 aa17.52■□□□□ 0.4
CPSF7-211ENST00000477890 NPHP3Q7Z494 1330 aa17.51■□□□□ 0.39
CPSF7-211ENST00000477890 COL22A1Q8NFW1 1626 aaPredicted RBP17.51■□□□□ 0.39
CPSF7-211ENST00000477890 TECPR2O15040 1411 aa17.51■□□□□ 0.39
CPSF7-211ENST00000477890 TMEM132EQ6IEE7 984 aa17.51■□□□□ 0.39
CPSF7-211ENST00000477890 LRPPRCP42704 1394 aaKnown RBP17.51■□□□□ 0.39
CPSF7-211ENST00000477890 KNDC1Q76NI1 1749 aa17.5■□□□□ 0.39
CPSF7-211ENST00000477890 NUTM2FA1L443 756 aa17.5■□□□□ 0.39
CPSF7-211ENST00000477890 USP21Q9UK80 565 aa17.5■□□□□ 0.39
CPSF7-211ENST00000477890 PIK3C2GO75747 1445 aa17.49■□□□□ 0.39
CPSF7-211ENST00000477890 FOXO3O43524 673 aa17.49■□□□□ 0.39
CPSF7-211ENST00000477890 XPCQ01831 940 aaPredicted RBP17.49■□□□□ 0.39
CPSF7-211ENST00000477890 PXDNQ92626 1479 aa17.49■□□□□ 0.39
CPSF7-211ENST00000477890 ABCC11Q96J66 1382 aa17.48■□□□□ 0.39
CPSF7-211ENST00000477890 PLEKHH1Q9ULM0 1364 aa17.48■□□□□ 0.39
CPSF7-211ENST00000477890 TRPC5Q9UL62 973 aaPredicted RBP17.47■□□□□ 0.39
CPSF7-211ENST00000477890 MYOM2P54296 1465 aa17.46■□□□□ 0.39
CPSF7-211ENST00000477890 FNBP4Q8N3X1 1017 aaPredicted RBP17.46■□□□□ 0.39
CPSF7-211ENST00000477890 FMN2Q9NZ56 1722 aa17.46■□□□□ 0.39
CPSF7-211ENST00000477890 MARF1Q9Y4F3 1742 aaKnown RBP17.46■□□□□ 0.39
CPSF7-211ENST00000477890 YTHDC2Q9H6S0 1430 aaKnown RBP17.46■□□□□ 0.39
CPSF7-211ENST00000477890 ATRNO75882 1429 aa17.43■□□□□ 0.38
CPSF7-211ENST00000477890 ACIN1Q9UKV3 1341 aaKnown RBP17.43■□□□□ 0.38
CPSF7-211ENST00000477890 KIF1AQ12756 1690 aa17.42■□□□□ 0.38
CPSF7-211ENST00000477890 C14orf93Q9H972 538 aaKnown RBP17.42■□□□□ 0.38
CPSF7-211ENST00000477890 ATAD2Q6PL18 1390 aa17.41■□□□□ 0.38
CPSF7-211ENST00000477890 RGPD8O14715 1765 aaPredicted RBP17.4■□□□□ 0.38
CPSF7-211ENST00000477890 NRXN1Q9ULB1 1477 aa17.4■□□□□ 0.38
CPSF7-211ENST00000477890 CFAP70Q5T0N1 1121 aa17.4■□□□□ 0.38
CPSF7-211ENST00000477890 SIRT1Q96EB6 747 aa17.4■□□□□ 0.38
CPSF7-211ENST00000477890 DHX57Q6P158 1386 aaKnown RBP17.4■□□□□ 0.38
CPSF7-211ENST00000477890 BCL9LQ86UU0 1499 aa17.39■□□□□ 0.37
CPSF7-211ENST00000477890 KRT28Q7Z3Y7 464 aa17.38■□□□□ 0.37
CPSF7-211ENST00000477890 SPATA31A3Q5VYP0 1347 aa17.38■□□□□ 0.37
CPSF7-211ENST00000477890 SAFB2Q14151 953 aaKnown RBP eCLIP17.37■□□□□ 0.37
CPSF7-211ENST00000477890 PRAM1Q96QH2 718 aa17.36■□□□□ 0.37
CPSF7-211ENST00000477890 PHF8Q9UPP1 1060 aa17.36■□□□□ 0.37
CPSF7-211ENST00000477890 RAB3GAP2Q9H2M9 1393 aa17.36■□□□□ 0.37
CPSF7-211ENST00000477890 TNKS1BP1Q9C0C2 1729 aaKnown RBP17.35■□□□□ 0.37
CPSF7-211ENST00000477890 GJD4Q96KN9 370 aaPredicted RBP17.35■□□□□ 0.37
CPSF7-211ENST00000477890 USP32Q8NFA0 1604 aa17.34■□□□□ 0.37
CPSF7-211ENST00000477890 TNS3Q68CZ2 1445 aa17.33■□□□□ 0.36
CPSF7-211ENST00000477890 HAP1P54257 671 aaPredicted RBP17.33■□□□□ 0.36
CPSF7-211ENST00000477890 PSME1Q06323 249 aa17.33■□□□□ 0.36
CPSF7-211ENST00000477890 UNC5CLQ8IV45 518 aa17.33■□□□□ 0.36
CPSF7-211ENST00000477890 POGKQ9P215 609 aa17.33■□□□□ 0.36
CPSF7-211ENST00000477890 SLIT2O94813 1529 aa17.32■□□□□ 0.36
CPSF7-211ENST00000477890 DLC1Q96QB1 1528 aa17.32■□□□□ 0.36
CPSF7-211ENST00000477890 PLEKHG5O94827 1062 aa17.32■□□□□ 0.36
CPSF7-211ENST00000477890 LMOD2Q6P5Q4 547 aa17.31■□□□□ 0.36
CPSF7-211ENST00000477890 CABLES1Q8TDN4 633 aa17.3■□□□□ 0.36
CPSF7-211ENST00000477890 GLI3P10071 1580 aa17.3■□□□□ 0.36
CPSF7-211ENST00000477890 RALGAPBQ86X10 1494 aa17.3■□□□□ 0.36
CPSF7-211ENST00000477890 SBNO1A3KN83 1393 aa17.29■□□□□ 0.36
CPSF7-211ENST00000477890 ADGRB1O14514 1584 aa17.29■□□□□ 0.36
CPSF7-211ENST00000477890 PMFBP1Q8TBY8 1022 aa17.29■□□□□ 0.36
CPSF7-211ENST00000477890 TRAK1Q9UPV9 953 aa17.29■□□□□ 0.36
CPSF7-211ENST00000477890 KDM2AQ9Y2K7 1162 aa17.29■□□□□ 0.36
CPSF7-211ENST00000477890 ABCA3Q99758 1704 aa17.29■□□□□ 0.36
CPSF7-211ENST00000477890 ANKARQ7Z5J8 1434 aa17.29■□□□□ 0.36
CPSF7-211ENST00000477890 ADGRB2O60241 1585 aa17.28■□□□□ 0.36
CPSF7-211ENST00000477890 HIRIP3Q9BW71 556 aaPredicted RBP17.28■□□□□ 0.36
CPSF7-211ENST00000477890 PLCH1Q4KWH8 1693 aa17.28■□□□□ 0.36
CPSF7-211ENST00000477890 DCAF11Q8TEB1 546 aa17.27■□□□□ 0.36
CPSF7-211ENST00000477890 ARHGEF10O15013 1369 aa17.27■□□□□ 0.35
CPSF7-211ENST00000477890 CCDC125Q86Z20 511 aa17.26■□□□□ 0.35
CPSF7-211ENST00000477890 NWD2Q9ULI1 1742 aa17.26■□□□□ 0.35
CPSF7-211ENST00000477890 BRWD3Q6RI45 1802 aa17.26■□□□□ 0.35
CPSF7-211ENST00000477890 MINK1Q8N4C8 1332 aaPredicted RBP17.25■□□□□ 0.35
CPSF7-211ENST00000477890 VPS72Q15906 364 aa17.24■□□□□ 0.35
CPSF7-211ENST00000477890 ZRANB1Q9UGI0 708 aa17.24■□□□□ 0.35
CPSF7-211ENST00000477890 CCDC9Q9Y3X0 531 aaKnown RBP17.24■□□□□ 0.35
CPSF7-211ENST00000477890 EP400Q96L91 3159 aa17.24■□□□□ 0.35
CPSF7-211ENST00000477890 TRPM3Q9HCF6 1732 aaPredicted RBP17.24■□□□□ 0.35
CPSF7-211ENST00000477890 EIF3AQ14152 1382 aaKnown RBP17.23■□□□□ 0.35
CPSF7-211ENST00000477890 PRR36Q9H6K5 1346 aa17.22■□□□□ 0.35
CPSF7-211ENST00000477890 TULP4Q9NRJ4 1543 aa17.22■□□□□ 0.35
CPSF7-211ENST00000477890 SEPT12Q8IYM1 358 aa17.22■□□□□ 0.35
CPSF7-211ENST00000477890 GPRASP1Q5JY77 1395 aa17.22■□□□□ 0.35
CPSF7-211ENST00000477890 ALS2Q96Q42 1657 aa17.21■□□□□ 0.35
CPSF7-211ENST00000477890 FAM83GA6ND36 823 aa17.21■□□□□ 0.35
CPSF7-211ENST00000477890 WASLO00401 505 aaPredicted RBP17.21■□□□□ 0.35
CPSF7-211ENST00000477890 BLMP54132 1417 aaPredicted RBP17.21■□□□□ 0.34
CPSF7-211ENST00000477890 STAC3Q96MF2 364 aa17.2■□□□□ 0.34
CPSF7-211ENST00000477890 ARHGEF28Q8N1W1 1705 aaKnown RBP17.19■□□□□ 0.34
CPSF7-211ENST00000477890 NGDNQ8NEJ9 315 aaKnown RBP17.18■□□□□ 0.34
CPSF7-211ENST00000477890 NRAPQ86VF7 1730 aa17.18■□□□□ 0.34
CPSF7-211ENST00000477890 A0A0G2JS52 829 aa17.17■□□□□ 0.34
CPSF7-211ENST00000477890 ONECUT3O60422 494 aaPredicted RBP17.17■□□□□ 0.34
CPSF7-211ENST00000477890 HRCP23327 699 aa17.17■□□□□ 0.34
CPSF7-211ENST00000477890 MYT1Q01538 1121 aa17.17■□□□□ 0.34
CPSF7-211ENST00000477890 BTG4Q9NY30 223 aa17.17■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms