RNA–Protein interactions for RNA: ENST00000477377.1

COMMD6-209, Transcript of COMM domain containing 6, humanhuman

TSL 3

Gene COMMD6, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD6-209ENST00000477377 JCADQ9P266 1359 aa22.76■■□□□ 1.23
COMMD6-209ENST00000477377 STAC3Q96MF2 364 aa22.75■■□□□ 1.23
COMMD6-209ENST00000477377 ORAI2Q96SN7 254 aa22.75■■□□□ 1.23
COMMD6-209ENST00000477377 NHSL1Q5SYE7 1610 aa22.74■■□□□ 1.23
COMMD6-209ENST00000477377 CDC42BPGQ6DT37 1551 aa22.73■■□□□ 1.23
COMMD6-209ENST00000477377 DLC1Q96QB1 1528 aa22.69■■□□□ 1.22
COMMD6-209ENST00000477377 PRAM1Q96QH2 718 aa22.68■■□□□ 1.22
COMMD6-209ENST00000477377 SIN3AQ96ST3 1273 aa22.68■■□□□ 1.22
COMMD6-209ENST00000477377 LRP6O75581 1613 aa22.68■■□□□ 1.22
COMMD6-209ENST00000477377 SHPRHQ149N8 1683 aa22.67■■□□□ 1.22
COMMD6-209ENST00000477377 SOS2Q07890 1332 aaPredicted RBP22.66■■□□□ 1.22
COMMD6-209ENST00000477377 TRIM26Q12899 539 aaPredicted RBP22.66■■□□□ 1.22
COMMD6-209ENST00000477377 SPATA31A6Q5VVP1 1343 aa22.65■■□□□ 1.22
COMMD6-209ENST00000477377 PHF23Q9BUL5 403 aaPredicted RBP22.65■■□□□ 1.22
COMMD6-209ENST00000477377 TRAK1Q9UPV9 953 aa22.65■■□□□ 1.22
COMMD6-209ENST00000477377 FMN2Q9NZ56 1722 aa22.63■■□□□ 1.21
COMMD6-209ENST00000477377 NUTM2FA1L443 756 aa22.63■■□□□ 1.21
COMMD6-209ENST00000477377 LRRC59Q96AG4 307 aaKnown RBP22.63■■□□□ 1.21
COMMD6-209ENST00000477377 SAFB2Q14151 953 aaKnown RBP eCLIP22.62■■□□□ 1.21
COMMD6-209ENST00000477377 ESCO1Q5FWF5 840 aa22.62■■□□□ 1.21
COMMD6-209ENST00000477377 L3MBTL2Q969R5 705 aa22.61■■□□□ 1.21
COMMD6-209ENST00000477377 PNPLA6Q8IY17 1366 aa22.61■■□□□ 1.21
COMMD6-209ENST00000477377 SOCS7O14512 581 aa22.6■■□□□ 1.21
COMMD6-209ENST00000477377 NBPF1Q3BBV0 1214 aa22.6■■□□□ 1.21
COMMD6-209ENST00000477377 POTEAQ6S8J7 498 aa22.59■■□□□ 1.21
COMMD6-209ENST00000477377 POGKQ9P215 609 aa22.58■■□□□ 1.21
COMMD6-209ENST00000477377 KIAA1210Q9ULL0 1709 aa22.57■■□□□ 1.2
COMMD6-209ENST00000477377 FOXO3O43524 673 aa22.57■■□□□ 1.2
COMMD6-209ENST00000477377 PXDNQ92626 1479 aa22.57■■□□□ 1.2
COMMD6-209ENST00000477377 ADGRB2O60241 1585 aa22.57■■□□□ 1.2
COMMD6-209ENST00000477377 RGPD8O14715 1765 aaPredicted RBP22.55■■□□□ 1.2
COMMD6-209ENST00000477377 USP32Q8NFA0 1604 aa22.55■■□□□ 1.2
COMMD6-209ENST00000477377 ARHGEF28Q8N1W1 1705 aaKnown RBP22.54■■□□□ 1.2
COMMD6-209ENST00000477377 NEUROD1Q13562 356 aa22.54■■□□□ 1.2
COMMD6-209ENST00000477377 HIRIP3Q9BW71 556 aaPredicted RBP22.54■■□□□ 1.2
COMMD6-209ENST00000477377 NPHP3Q7Z494 1330 aa22.54■■□□□ 1.2
COMMD6-209ENST00000477377 NUTM2BA6NNL0 878 aaPredicted RBP22.53■■□□□ 1.2
COMMD6-209ENST00000477377 NUTM2EB1AL46 878 aaPredicted RBP22.53■■□□□ 1.2
COMMD6-209ENST00000477377 XPCQ01831 940 aaPredicted RBP22.53■■□□□ 1.2
COMMD6-209ENST00000477377 NUTM2AQ8IVF1 878 aaPredicted RBP22.53■■□□□ 1.2
COMMD6-209ENST00000477377 MINK1Q8N4C8 1332 aaPredicted RBP22.53■■□□□ 1.2
COMMD6-209ENST00000477377 PRR36Q9H6K5 1346 aa22.52■■□□□ 1.2
COMMD6-209ENST00000477377 WASLO00401 505 aaPredicted RBP22.5■■□□□ 1.19
COMMD6-209ENST00000477377 PHF8Q9UPP1 1060 aa22.5■■□□□ 1.19
COMMD6-209ENST00000477377 ANKARQ7Z5J8 1434 aa22.49■■□□□ 1.19
COMMD6-209ENST00000477377 KIF1AQ12756 1690 aa22.49■■□□□ 1.19
COMMD6-209ENST00000477377 COL22A1Q8NFW1 1626 aaPredicted RBP22.48■■□□□ 1.19
COMMD6-209ENST00000477377 NBPF8Q3BBV2 869 aa22.46■■□□□ 1.19
COMMD6-209ENST00000477377 MEX3CQ5U5Q3 659 aaKnown RBP22.46■■□□□ 1.19
COMMD6-209ENST00000477377 KRT28Q7Z3Y7 464 aa22.46■■□□□ 1.19
COMMD6-209ENST00000477377 SPATA31A3Q5VYP0 1347 aa22.45■■□□□ 1.18
COMMD6-209ENST00000477377 TULP4Q9NRJ4 1543 aa22.45■■□□□ 1.18
COMMD6-209ENST00000477377 PMFBP1Q8TBY8 1022 aa22.44■■□□□ 1.18
COMMD6-209ENST00000477377 TRPM1Q7Z4N2 1603 aa22.43■■□□□ 1.18
COMMD6-209ENST00000477377 AFF2P51816 1311 aa22.41■■□□□ 1.18
COMMD6-209ENST00000477377 ZNF772Q68DY9 489 aaPredicted RBP22.41■■□□□ 1.18
COMMD6-209ENST00000477377 ADAMTS2O95450 1211 aa22.4■■□□□ 1.18
COMMD6-209ENST00000477377 CDK19Q9BWU1 502 aa22.4■■□□□ 1.18
COMMD6-209ENST00000477377 ATP7BP35670 1465 aa22.4■■□□□ 1.18
COMMD6-209ENST00000477377 SBNO1A3KN83 1393 aa22.39■■□□□ 1.18
COMMD6-209ENST00000477377 NUDT16Q96DE0 195 aaKnown RBP22.39■■□□□ 1.17
COMMD6-209ENST00000477377 C8orf37Q96NL8 207 aa22.39■■□□□ 1.17
COMMD6-209ENST00000477377 EIF3AQ14152 1382 aaKnown RBP22.38■■□□□ 1.17
COMMD6-209ENST00000477377 TNS3Q68CZ2 1445 aa22.37■■□□□ 1.17
COMMD6-209ENST00000477377 CENPJQ9HC77 1338 aaPredicted RBP22.36■■□□□ 1.17
COMMD6-209ENST00000477377 PSME1Q06323 249 aa22.36■■□□□ 1.17
COMMD6-209ENST00000477377 TRPM3Q9HCF6 1732 aaPredicted RBP22.36■■□□□ 1.17
COMMD6-209ENST00000477377 GPRASP1Q5JY77 1395 aa22.36■■□□□ 1.17
COMMD6-209ENST00000477377 FNBP4Q8N3X1 1017 aaPredicted RBP22.35■■□□□ 1.17
COMMD6-209ENST00000477377 NGLY1Q96IV0 654 aa22.33■■□□□ 1.17
COMMD6-209ENST00000477377 ROCK2O75116 1388 aaKnown RBP22.33■■□□□ 1.17
COMMD6-209ENST00000477377 TOPAZ1Q8N9V7 1692 aa22.32■■□□□ 1.16
COMMD6-209ENST00000477377 PLEKHG3A1L390 1219 aa22.31■■□□□ 1.16
COMMD6-209ENST00000477377 CABLES1Q8TDN4 633 aa22.31■■□□□ 1.16
COMMD6-209ENST00000477377 CCDC61Q9Y6R9 512 aa22.31■■□□□ 1.16
COMMD6-209ENST00000477377 QRICH2Q9H0J4 1663 aa22.3■■□□□ 1.16
COMMD6-209ENST00000477377 BCL9LQ86UU0 1499 aa22.3■■□□□ 1.16
COMMD6-209ENST00000477377 TONSLQ96HA7 1378 aa22.3■■□□□ 1.16
COMMD6-209ENST00000477377 QTRT2Q9H974 415 aaKnown RBP22.3■■□□□ 1.16
COMMD6-209ENST00000477377 MARF1Q9Y4F3 1742 aaKnown RBP22.3■■□□□ 1.16
COMMD6-209ENST00000477377 ALS2Q96Q42 1657 aa22.3■■□□□ 1.16
COMMD6-209ENST00000477377 POLR3AO14802 1390 aaPredicted RBP22.29■■□□□ 1.16
COMMD6-209ENST00000477377 RXRBP28702 533 aa22.29■■□□□ 1.16
COMMD6-209ENST00000477377 CABP2Q9NPB3 220 aa22.29■■□□□ 1.16
COMMD6-209ENST00000477377 NGDNQ8NEJ9 315 aaKnown RBP22.28■■□□□ 1.16
COMMD6-209ENST00000477377 USP21Q9UK80 565 aa22.28■■□□□ 1.16
COMMD6-209ENST00000477377 ITSN1Q15811 1721 aa22.28■■□□□ 1.16
COMMD6-209ENST00000477377 ARHGEF10O15013 1369 aa22.27■■□□□ 1.16
COMMD6-209ENST00000477377 ACEP12821 1306 aa22.27■■□□□ 1.16
COMMD6-209ENST00000477377 RALGAPBQ86X10 1494 aa22.26■■□□□ 1.15
COMMD6-209ENST00000477377 ABCA3Q99758 1704 aa22.26■■□□□ 1.15
COMMD6-209ENST00000477377 ATRNO75882 1429 aa22.25■■□□□ 1.15
COMMD6-209ENST00000477377 PCGF6Q9BYE7 350 aa22.25■■□□□ 1.15
COMMD6-209ENST00000477377 CDK12Q9NYV4 1490 aaPredicted RBP22.25■■□□□ 1.15
COMMD6-209ENST00000477377 SLIT2O94813 1529 aa22.25■■□□□ 1.15
COMMD6-209ENST00000477377 RBM6P78332 1123 aaKnown RBP22.24■■□□□ 1.15
COMMD6-209ENST00000477377 SRPK2P78362 688 aaKnown RBP22.24■■□□□ 1.15
COMMD6-209ENST00000477377 LMOD2Q6P5Q4 547 aa22.24■■□□□ 1.15
COMMD6-209ENST00000477377 CARD11Q9BXL7 1154 aa22.22■■□□□ 1.15
COMMD6-209ENST00000477377 TRPC5Q9UL62 973 aaPredicted RBP22.22■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms