RNA–Protein interactions for RNA: ENST00000477174.1

ACTN4-205, Transcript of actinin alpha 4, humanhuman

TSL 3

Gene ACTN4, Length 544 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN4-205ENST00000477174 ORAI2Q96SN7 254 aa19.31■□□□□ 0.68
ACTN4-205ENST00000477174 KNDC1Q76NI1 1749 aa19.31■□□□□ 0.68
ACTN4-205ENST00000477174 NALCNQ8IZF0 1738 aa19.31■□□□□ 0.68
ACTN4-205ENST00000477174 DISP3Q9P2K9 1392 aa19.31■□□□□ 0.68
ACTN4-205ENST00000477174 SAFB2Q14151 953 aaKnown RBP eCLIP19.3■□□□□ 0.68
ACTN4-205ENST00000477174 NBPF1Q3BBV0 1214 aa19.3■□□□□ 0.68
ACTN4-205ENST00000477174 ESCO1Q5FWF5 840 aa19.29■□□□□ 0.68
ACTN4-205ENST00000477174 LRRC59Q96AG4 307 aaKnown RBP19.28■□□□□ 0.68
ACTN4-205ENST00000477174 JCADQ9P266 1359 aa19.28■□□□□ 0.68
ACTN4-205ENST00000477174 CDC42BPGQ6DT37 1551 aa19.27■□□□□ 0.68
ACTN4-205ENST00000477174 AHDC1Q5TGY3 1603 aaPredicted RBP19.26■□□□□ 0.67
ACTN4-205ENST00000477174 NUTM2FA1L443 756 aa19.25■□□□□ 0.67
ACTN4-205ENST00000477174 TONSLQ96HA7 1378 aa19.24■□□□□ 0.67
ACTN4-205ENST00000477174 DDX17Q92841 729 aaKnown RBP19.24■□□□□ 0.67
ACTN4-205ENST00000477174 PHLPP1O60346 1717 aa19.23■□□□□ 0.67
ACTN4-205ENST00000477174 SOS2Q07890 1332 aaPredicted RBP19.23■□□□□ 0.67
ACTN4-205ENST00000477174 MINK1Q8N4C8 1332 aaPredicted RBP19.23■□□□□ 0.67
ACTN4-205ENST00000477174 KIAA1210Q9ULL0 1709 aa19.22■□□□□ 0.67
ACTN4-205ENST00000477174 FOXO3O43524 673 aa19.22■□□□□ 0.67
ACTN4-205ENST00000477174 HIRIP3Q9BW71 556 aaPredicted RBP19.22■□□□□ 0.67
ACTN4-205ENST00000477174 SPATA31A6Q5VVP1 1343 aa19.22■□□□□ 0.67
ACTN4-205ENST00000477174 NPHP3Q7Z494 1330 aa19.22■□□□□ 0.67
ACTN4-205ENST00000477174 WASLO00401 505 aaPredicted RBP19.21■□□□□ 0.67
ACTN4-205ENST00000477174 COL16A1Q07092 1604 aaPredicted RBP19.21■□□□□ 0.67
ACTN4-205ENST00000477174 CLSPNQ9HAW4 1339 aa19.21■□□□□ 0.67
ACTN4-205ENST00000477174 NBPF8Q3BBV2 869 aa19.2■□□□□ 0.66
ACTN4-205ENST00000477174 PHF23Q9BUL5 403 aaPredicted RBP19.19■□□□□ 0.66
ACTN4-205ENST00000477174 PHF8Q9UPP1 1060 aa19.19■□□□□ 0.66
ACTN4-205ENST00000477174 MED1Q15648 1581 aaPredicted RBP19.19■□□□□ 0.66
ACTN4-205ENST00000477174 EIF3AQ14152 1382 aaKnown RBP19.19■□□□□ 0.66
ACTN4-205ENST00000477174 ROCK2O75116 1388 aaKnown RBP19.18■□□□□ 0.66
ACTN4-205ENST00000477174 ANKARQ7Z5J8 1434 aa19.17■□□□□ 0.66
ACTN4-205ENST00000477174 TIMELESSQ9UNS1 1208 aa19.17■□□□□ 0.66
ACTN4-205ENST00000477174 CENPJQ9HC77 1338 aaPredicted RBP19.16■□□□□ 0.66
ACTN4-205ENST00000477174 NHSL1Q5SYE7 1610 aa19.15■□□□□ 0.66
ACTN4-205ENST00000477174 CDK19Q9BWU1 502 aa19.15■□□□□ 0.66
ACTN4-205ENST00000477174 FMN2Q9NZ56 1722 aa19.14■□□□□ 0.66
ACTN4-205ENST00000477174 PSME1Q06323 249 aa19.14■□□□□ 0.65
ACTN4-205ENST00000477174 ADGRB2O60241 1585 aa19.14■□□□□ 0.65
ACTN4-205ENST00000477174 KRT28Q7Z3Y7 464 aa19.13■□□□□ 0.65
ACTN4-205ENST00000477174 GPRASP1Q5JY77 1395 aa19.13■□□□□ 0.65
ACTN4-205ENST00000477174 PNPLA6Q8IY17 1366 aa19.13■□□□□ 0.65
ACTN4-205ENST00000477174 PRR36Q9H6K5 1346 aa19.12■□□□□ 0.65
ACTN4-205ENST00000477174 XPCQ01831 940 aaPredicted RBP19.12■□□□□ 0.65
ACTN4-205ENST00000477174 NUDT16Q96DE0 195 aaKnown RBP19.12■□□□□ 0.65
ACTN4-205ENST00000477174 NUTM2BA6NNL0 878 aaPredicted RBP19.11■□□□□ 0.65
ACTN4-205ENST00000477174 NUTM2EB1AL46 878 aaPredicted RBP19.11■□□□□ 0.65
ACTN4-205ENST00000477174 NUTM2AQ8IVF1 878 aaPredicted RBP19.11■□□□□ 0.65
ACTN4-205ENST00000477174 PMFBP1Q8TBY8 1022 aa19.11■□□□□ 0.65
ACTN4-205ENST00000477174 CARD11Q9BXL7 1154 aa19.11■□□□□ 0.65
ACTN4-205ENST00000477174 RGS17Q9UGC6 210 aaPredicted RBP19.11■□□□□ 0.65
ACTN4-205ENST00000477174 ARHGEF28Q8N1W1 1705 aaKnown RBP19.11■□□□□ 0.65
ACTN4-205ENST00000477174 MEX3CQ5U5Q3 659 aaKnown RBP19.1■□□□□ 0.65
ACTN4-205ENST00000477174 ILDR2Q71H61 639 aa19.1■□□□□ 0.65
ACTN4-205ENST00000477174 CCDC61Q9Y6R9 512 aa19.1■□□□□ 0.65
ACTN4-205ENST00000477174 PXDNQ92626 1479 aa19.09■□□□□ 0.65
ACTN4-205ENST00000477174 CCER1Q8TC90 406 aaPredicted RBP19.09■□□□□ 0.65
ACTN4-205ENST00000477174 TRPM1Q7Z4N2 1603 aa19.09■□□□□ 0.65
ACTN4-205ENST00000477174 TULP4Q9NRJ4 1543 aa19.09■□□□□ 0.65
ACTN4-205ENST00000477174 SHPRHQ149N8 1683 aa19.08■□□□□ 0.65
ACTN4-205ENST00000477174 SPATA31A3Q5VYP0 1347 aa19.08■□□□□ 0.65
ACTN4-205ENST00000477174 NGDNQ8NEJ9 315 aaKnown RBP19.07■□□□□ 0.64
ACTN4-205ENST00000477174 KIF1AQ12756 1690 aa19.06■□□□□ 0.64
ACTN4-205ENST00000477174 SRPK2P78362 688 aaKnown RBP19.06■□□□□ 0.64
ACTN4-205ENST00000477174 SBNO1A3KN83 1393 aa19.06■□□□□ 0.64
ACTN4-205ENST00000477174 EVC2Q86UK5 1308 aa19.05■□□□□ 0.64
ACTN4-205ENST00000477174 RALGAPBQ86X10 1494 aa19.05■□□□□ 0.64
ACTN4-205ENST00000477174 LRP6O75581 1613 aa19.05■□□□□ 0.64
ACTN4-205ENST00000477174 PLEKHG3A1L390 1219 aa19.05■□□□□ 0.64
ACTN4-205ENST00000477174 USP32Q8NFA0 1604 aa19.03■□□□□ 0.64
ACTN4-205ENST00000477174 ZNF772Q68DY9 489 aaPredicted RBP19.03■□□□□ 0.64
ACTN4-205ENST00000477174 CABP2Q9NPB3 220 aa19.03■□□□□ 0.64
ACTN4-205ENST00000477174 ATP7BP35670 1465 aa19.03■□□□□ 0.64
ACTN4-205ENST00000477174 RGPD8O14715 1765 aaPredicted RBP19.01■□□□□ 0.63
ACTN4-205ENST00000477174 ADAMTS2O95450 1211 aa19.01■□□□□ 0.63
ACTN4-205ENST00000477174 POTEAQ6S8J7 498 aa19.01■□□□□ 0.63
ACTN4-205ENST00000477174 SLC24A1O60721 1099 aa19■□□□□ 0.63
ACTN4-205ENST00000477174 LMOD2Q6P5Q4 547 aa19■□□□□ 0.63
ACTN4-205ENST00000477174 NGLY1Q96IV0 654 aa19■□□□□ 0.63
ACTN4-205ENST00000477174 C8orf37Q96NL8 207 aa19■□□□□ 0.63
ACTN4-205ENST00000477174 ARHGEF10O15013 1369 aa19■□□□□ 0.63
ACTN4-205ENST00000477174 SBNO2Q9Y2G9 1366 aa19■□□□□ 0.63
ACTN4-205ENST00000477174 TNS3Q68CZ2 1445 aa19■□□□□ 0.63
ACTN4-205ENST00000477174 ACEP12821 1306 aa19■□□□□ 0.63
ACTN4-205ENST00000477174 POLR3AO14802 1390 aaPredicted RBP18.99■□□□□ 0.63
ACTN4-205ENST00000477174 CABP1Q9NZU7 370 aa18.98■□□□□ 0.63
ACTN4-205ENST00000477174 PAK3O75914 559 aaPredicted RBP18.97■□□□□ 0.63
ACTN4-205ENST00000477174 AFF2P51816 1311 aa18.97■□□□□ 0.63
ACTN4-205ENST00000477174 FNBP4Q8N3X1 1017 aaPredicted RBP18.96■□□□□ 0.63
ACTN4-205ENST00000477174 COL22A1Q8NFW1 1626 aaPredicted RBP18.96■□□□□ 0.63
ACTN4-205ENST00000477174 PPIP5K1Q6PFW1 1433 aa18.95■□□□□ 0.62
ACTN4-205ENST00000477174 ST20-MTHFSA0A0A6YYL1 179 aa18.95■□□□□ 0.62
ACTN4-205ENST00000477174 PUS7Q96PZ0 661 aaKnown RBP18.95■□□□□ 0.62
ACTN4-205ENST00000477174 QRICH2Q9H0J4 1663 aa18.95■□□□□ 0.62
ACTN4-205ENST00000477174 SOCS7O14512 581 aa18.94■□□□□ 0.62
ACTN4-205ENST00000477174 HAP1P54257 671 aaPredicted RBP18.94■□□□□ 0.62
ACTN4-205ENST00000477174 CABLES1Q8TDN4 633 aa18.94■□□□□ 0.62
ACTN4-205ENST00000477174 ZNF692Q9BU19 519 aaPredicted RBP18.93■□□□□ 0.62
ACTN4-205ENST00000477174 BRD4O60885 1362 aaPredicted RBP18.93■□□□□ 0.62
ACTN4-205ENST00000477174 ATAD2Q6PL18 1390 aa18.93■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms