RNA–Protein interactions for RNA: ENST00000476642.5

HLA-DPA1-246, Transcript of major histocompatibility complex, class II, DP alpha 1, humanhuman

Gene HLA-DPA1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DPA1-246ENST00000476642 DLC1Q96QB1 1528 aa18.84■□□□□ 0.61
HLA-DPA1-246ENST00000476642 STK26Q9P289 416 aa18.83■□□□□ 0.6
HLA-DPA1-246ENST00000476642 PHLPP1O60346 1717 aa18.8■□□□□ 0.6
HLA-DPA1-246ENST00000476642 POTEAQ6S8J7 498 aa18.8■□□□□ 0.6
HLA-DPA1-246ENST00000476642 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
HLA-DPA1-246ENST00000476642 ROBO2Q9HCK4 1378 aa18.8■□□□□ 0.6
HLA-DPA1-246ENST00000476642 DCCP43146 1447 aa18.79■□□□□ 0.6
HLA-DPA1-246ENST00000476642 RALGAPBQ86X10 1494 aa18.78■□□□□ 0.6
HLA-DPA1-246ENST00000476642 ADGRL3Q9HAR2 1447 aa18.78■□□□□ 0.6
HLA-DPA1-246ENST00000476642 MEX3CQ5U5Q3 659 aaKnown RBP18.78■□□□□ 0.6
HLA-DPA1-246ENST00000476642 POGKQ9P215 609 aa18.78■□□□□ 0.6
HLA-DPA1-246ENST00000476642 TRAK1Q9UPV9 953 aa18.78■□□□□ 0.6
HLA-DPA1-246ENST00000476642 NBPF8Q3BBV2 869 aa18.77■□□□□ 0.6
HLA-DPA1-246ENST00000476642 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.77■□□□□ 0.59
HLA-DPA1-246ENST00000476642 NBPF1Q3BBV0 1214 aa18.76■□□□□ 0.59
HLA-DPA1-246ENST00000476642 NALCNQ8IZF0 1738 aa18.76■□□□□ 0.59
HLA-DPA1-246ENST00000476642 ARHGEF28Q8N1W1 1705 aaKnown RBP18.76■□□□□ 0.59
HLA-DPA1-246ENST00000476642 EIF3AQ14152 1382 aaKnown RBP18.75■□□□□ 0.59
HLA-DPA1-246ENST00000476642 GPRASP1Q5JY77 1395 aa18.75■□□□□ 0.59
HLA-DPA1-246ENST00000476642 SPATA31A6Q5VVP1 1343 aa18.74■□□□□ 0.59
HLA-DPA1-246ENST00000476642 PRAM1Q96QH2 718 aa18.74■□□□□ 0.59
HLA-DPA1-246ENST00000476642 WAPLQ7Z5K2 1190 aa18.73■□□□□ 0.59
HLA-DPA1-246ENST00000476642 CARD11Q9BXL7 1154 aa18.73■□□□□ 0.59
HLA-DPA1-246ENST00000476642 CDC42BPGQ6DT37 1551 aa18.72■□□□□ 0.59
HLA-DPA1-246ENST00000476642 COL16A1Q07092 1604 aaPredicted RBP18.71■□□□□ 0.59
HLA-DPA1-246ENST00000476642 BRINP3Q76B58 766 aa18.71■□□□□ 0.59
HLA-DPA1-246ENST00000476642 ZNF772Q68DY9 489 aaPredicted RBP18.7■□□□□ 0.58
HLA-DPA1-246ENST00000476642 PLEKHH1Q9ULM0 1364 aa18.69■□□□□ 0.58
HLA-DPA1-246ENST00000476642 AHDC1Q5TGY3 1603 aaPredicted RBP18.69■□□□□ 0.58
HLA-DPA1-246ENST00000476642 CENPJQ9HC77 1338 aaPredicted RBP18.69■□□□□ 0.58
HLA-DPA1-246ENST00000476642 ADGRB2O60241 1585 aa18.68■□□□□ 0.58
HLA-DPA1-246ENST00000476642 NUTM2BA6NNL0 878 aaPredicted RBP18.68■□□□□ 0.58
HLA-DPA1-246ENST00000476642 NUTM2EB1AL46 878 aaPredicted RBP18.68■□□□□ 0.58
HLA-DPA1-246ENST00000476642 NUTM2AQ8IVF1 878 aaPredicted RBP18.68■□□□□ 0.58
HLA-DPA1-246ENST00000476642 SLC24A1O60721 1099 aa18.66■□□□□ 0.58
HLA-DPA1-246ENST00000476642 SAFB2Q14151 953 aaKnown RBP eCLIP18.66■□□□□ 0.58
HLA-DPA1-246ENST00000476642 QRICH2Q9H0J4 1663 aa18.66■□□□□ 0.58
HLA-DPA1-246ENST00000476642 LRP6O75581 1613 aa18.64■□□□□ 0.57
HLA-DPA1-246ENST00000476642 FMN2Q9NZ56 1722 aa18.64■□□□□ 0.57
HLA-DPA1-246ENST00000476642 LRRC59Q96AG4 307 aaKnown RBP18.64■□□□□ 0.57
HLA-DPA1-246ENST00000476642 MST1RQ04912 1400 aa18.64■□□□□ 0.57
HLA-DPA1-246ENST00000476642 MINK1Q8N4C8 1332 aaPredicted RBP18.63■□□□□ 0.57
HLA-DPA1-246ENST00000476642 SHPRHQ149N8 1683 aa18.61■□□□□ 0.57
HLA-DPA1-246ENST00000476642 SBNO2Q9Y2G9 1366 aa18.61■□□□□ 0.57
HLA-DPA1-246ENST00000476642 WASLO00401 505 aaPredicted RBP18.61■□□□□ 0.57
HLA-DPA1-246ENST00000476642 C1orf167Q5SNV9 1468 aa18.6■□□□□ 0.57
HLA-DPA1-246ENST00000476642 ANKARQ7Z5J8 1434 aa18.6■□□□□ 0.57
HLA-DPA1-246ENST00000476642 RXRBP28702 533 aa18.6■□□□□ 0.57
HLA-DPA1-246ENST00000476642 HIRIP3Q9BW71 556 aaPredicted RBP18.59■□□□□ 0.57
HLA-DPA1-246ENST00000476642 USP47Q96K76 1375 aa18.58■□□□□ 0.57
HLA-DPA1-246ENST00000476642 EVC2Q86UK5 1308 aa18.58■□□□□ 0.57
HLA-DPA1-246ENST00000476642 TULP4Q9NRJ4 1543 aa18.58■□□□□ 0.56
HLA-DPA1-246ENST00000476642 ITSN1Q15811 1721 aa18.57■□□□□ 0.56
HLA-DPA1-246ENST00000476642 KIF1AQ12756 1690 aa18.57■□□□□ 0.56
HLA-DPA1-246ENST00000476642 AFF2P51816 1311 aa18.56■□□□□ 0.56
HLA-DPA1-246ENST00000476642 DDX17Q92841 729 aaKnown RBP18.56■□□□□ 0.56
HLA-DPA1-246ENST00000476642 ESCO1Q5FWF5 840 aa18.55■□□□□ 0.56
HLA-DPA1-246ENST00000476642 C8orf37Q96NL8 207 aa18.55■□□□□ 0.56
HLA-DPA1-246ENST00000476642 CDK19Q9BWU1 502 aa18.55■□□□□ 0.56
HLA-DPA1-246ENST00000476642 ZEB1P37275 1124 aaPredicted RBP18.54■□□□□ 0.56
HLA-DPA1-246ENST00000476642 SRPK2P78362 688 aaKnown RBP18.54■□□□□ 0.56
HLA-DPA1-246ENST00000476642 RGPD8O14715 1765 aaPredicted RBP18.54■□□□□ 0.56
HLA-DPA1-246ENST00000476642 NHSL1Q5SYE7 1610 aa18.53■□□□□ 0.56
HLA-DPA1-246ENST00000476642 ST20-MTHFSA0A0A6YYL1 179 aa18.53■□□□□ 0.56
HLA-DPA1-246ENST00000476642 NUTM2FA1L443 756 aa18.53■□□□□ 0.56
HLA-DPA1-246ENST00000476642 EIF4G2P78344 907 aaKnown RBP eCLIP18.53■□□□□ 0.56
HLA-DPA1-246ENST00000476642 PNPLA6Q8IY17 1366 aa18.53■□□□□ 0.56
HLA-DPA1-246ENST00000476642 USP32Q8NFA0 1604 aa18.52■□□□□ 0.55
HLA-DPA1-246ENST00000476642 NGLY1Q96IV0 654 aa18.51■□□□□ 0.55
HLA-DPA1-246ENST00000476642 ORAI2Q96SN7 254 aa18.51■□□□□ 0.55
HLA-DPA1-246ENST00000476642 NPHP3Q7Z494 1330 aa18.5■□□□□ 0.55
HLA-DPA1-246ENST00000476642 ADAMTS2O95450 1211 aa18.5■□□□□ 0.55
HLA-DPA1-246ENST00000476642 UPF1Q92900 1129 aaKnown RBP eCLIP18.5■□□□□ 0.55
HLA-DPA1-246ENST00000476642 NUDT16Q96DE0 195 aaKnown RBP18.5■□□□□ 0.55
HLA-DPA1-246ENST00000476642 PUS7Q96PZ0 661 aaKnown RBP18.5■□□□□ 0.55
HLA-DPA1-246ENST00000476642 QTRT2Q9H974 415 aaKnown RBP18.5■□□□□ 0.55
HLA-DPA1-246ENST00000476642 PHF8Q9UPP1 1060 aa18.5■□□□□ 0.55
HLA-DPA1-246ENST00000476642 CCDC61Q9Y6R9 512 aa18.5■□□□□ 0.55
HLA-DPA1-246ENST00000476642 ATP7BP35670 1465 aa18.5■□□□□ 0.55
HLA-DPA1-246ENST00000476642 TMF1P82094 1093 aa18.49■□□□□ 0.55
HLA-DPA1-246ENST00000476642 CDCA8Q53HL2 280 aa18.49■□□□□ 0.55
HLA-DPA1-246ENST00000476642 ATAD2Q6PL18 1390 aa18.49■□□□□ 0.55
HLA-DPA1-246ENST00000476642 RBM6P78332 1123 aaKnown RBP18.48■□□□□ 0.55
HLA-DPA1-246ENST00000476642 TOPAZ1Q8N9V7 1692 aa18.47■□□□□ 0.55
HLA-DPA1-246ENST00000476642 TESK2Q96S53 571 aa18.47■□□□□ 0.55
HLA-DPA1-246ENST00000476642 SOS2Q07890 1332 aaPredicted RBP18.47■□□□□ 0.55
HLA-DPA1-246ENST00000476642 CDK12Q9NYV4 1490 aaPredicted RBP18.46■□□□□ 0.55
HLA-DPA1-246ENST00000476642 CABP2Q9NPB3 220 aa18.46■□□□□ 0.55
HLA-DPA1-246ENST00000476642 PRR36Q9H6K5 1346 aa18.46■□□□□ 0.55
HLA-DPA1-246ENST00000476642 PSME1Q06323 249 aa18.45■□□□□ 0.54
HLA-DPA1-246ENST00000476642 PPIP5K1Q6PFW1 1433 aa18.44■□□□□ 0.54
HLA-DPA1-246ENST00000476642 FOXO3O43524 673 aa18.44■□□□□ 0.54
HLA-DPA1-246ENST00000476642 NGDNQ8NEJ9 315 aaKnown RBP18.44■□□□□ 0.54
HLA-DPA1-246ENST00000476642 PLEKHG3A1L390 1219 aa18.43■□□□□ 0.54
HLA-DPA1-246ENST00000476642 HSPA5P11021 654 aaKnown RBP18.42■□□□□ 0.54
HLA-DPA1-246ENST00000476642 PMFBP1Q8TBY8 1022 aa18.42■□□□□ 0.54
HLA-DPA1-246ENST00000476642 USP21Q9UK80 565 aa18.42■□□□□ 0.54
HLA-DPA1-246ENST00000476642 NINLQ9Y2I6 1382 aa18.42■□□□□ 0.54
HLA-DPA1-246ENST00000476642 POLR3AO14802 1390 aaPredicted RBP18.41■□□□□ 0.54
HLA-DPA1-246ENST00000476642 KRT28Q7Z3Y7 464 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms