RNA–Protein interactions for RNA: ENST00000476594.1

CCM2-208, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 533 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-208ENST00000476594 CFAP70Q5T0N1 1121 aa14.81□□□□□ -0.04
CCM2-208ENST00000476594 KDM2AQ9Y2K7 1162 aa14.81□□□□□ -0.04
CCM2-208ENST00000476594 SPATA31A6Q5VVP1 1343 aa14.81□□□□□ -0.04
CCM2-208ENST00000476594 C1orf167Q5SNV9 1468 aa14.81□□□□□ -0.04
CCM2-208ENST00000476594 LRRC59Q96AG4 307 aaKnown RBP14.8□□□□□ -0.04
CCM2-208ENST00000476594 NHSL1Q5SYE7 1610 aa14.78□□□□□ -0.04
CCM2-208ENST00000476594 POGKQ9P215 609 aa14.78□□□□□ -0.04
CCM2-208ENST00000476594 DLC1Q96QB1 1528 aa14.77□□□□□ -0.04
CCM2-208ENST00000476594 MEX3CQ5U5Q3 659 aaKnown RBP14.77□□□□□ -0.05
CCM2-208ENST00000476594 WAPLQ7Z5K2 1190 aa14.77□□□□□ -0.05
CCM2-208ENST00000476594 SHPRHQ149N8 1683 aa14.77□□□□□ -0.05
CCM2-208ENST00000476594 NPHP3Q7Z494 1330 aa14.76□□□□□ -0.05
CCM2-208ENST00000476594 TRIM26Q12899 539 aaPredicted RBP14.76□□□□□ -0.05
CCM2-208ENST00000476594 EIF3AQ14152 1382 aaKnown RBP14.75□□□□□ -0.05
CCM2-208ENST00000476594 ESCO1Q5FWF5 840 aa14.75□□□□□ -0.05
CCM2-208ENST00000476594 ADRA2BP18089 450 aa14.74□□□□□ -0.05
CCM2-208ENST00000476594 PRAM1Q96QH2 718 aa14.74□□□□□ -0.05
CCM2-208ENST00000476594 PLEKHH1Q9ULM0 1364 aa14.73□□□□□ -0.05
CCM2-208ENST00000476594 ADGRB1O14514 1584 aa14.73□□□□□ -0.05
CCM2-208ENST00000476594 ORAI2Q96SN7 254 aa14.73□□□□□ -0.05
CCM2-208ENST00000476594 TRAK1Q9UPV9 953 aa14.72□□□□□ -0.05
CCM2-208ENST00000476594 SAFB2Q14151 953 aaKnown RBP eCLIP14.71□□□□□ -0.055e-8■■■□□ 18
CCM2-208ENST00000476594 FMN2Q9NZ56 1722 aa14.71□□□□□ -0.05
CCM2-208ENST00000476594 KIAA1210Q9ULL0 1709 aa14.71□□□□□ -0.05
CCM2-208ENST00000476594 KIF1AQ12756 1690 aa14.71□□□□□ -0.06
CCM2-208ENST00000476594 SOS2Q07890 1332 aaPredicted RBP14.7□□□□□ -0.06
CCM2-208ENST00000476594 ADGRB2O60241 1585 aa14.69□□□□□ -0.06
CCM2-208ENST00000476594 ANKARQ7Z5J8 1434 aa14.69□□□□□ -0.06
CCM2-208ENST00000476594 NUTM2FA1L443 756 aa14.69□□□□□ -0.06
CCM2-208ENST00000476594 NUTM2BA6NNL0 878 aaPredicted RBP14.69□□□□□ -0.06
CCM2-208ENST00000476594 NUTM2EB1AL46 878 aaPredicted RBP14.69□□□□□ -0.06
CCM2-208ENST00000476594 ZNF772Q68DY9 489 aaPredicted RBP14.69□□□□□ -0.06
CCM2-208ENST00000476594 NUTM2AQ8IVF1 878 aaPredicted RBP14.69□□□□□ -0.06
CCM2-208ENST00000476594 PNPLA6Q8IY17 1366 aa14.69□□□□□ -0.06
CCM2-208ENST00000476594 DDX17Q92841 729 aaKnown RBP14.68□□□□□ -0.06
CCM2-208ENST00000476594 FOXO3O43524 673 aa14.67□□□□□ -0.06
CCM2-208ENST00000476594 PSME1Q06323 249 aa14.67□□□□□ -0.06
CCM2-208ENST00000476594 LRP6O75581 1613 aa14.66□□□□□ -0.06
CCM2-208ENST00000476594 NEUROD1Q13562 356 aa14.66□□□□□ -0.06
CCM2-208ENST00000476594 PHF8Q9UPP1 1060 aa14.66□□□□□ -0.06
CCM2-208ENST00000476594 MINK1Q8N4C8 1332 aaPredicted RBP14.66□□□□□ -0.06
CCM2-208ENST00000476594 L3MBTL2Q969R5 705 aa14.64□□□□□ -0.07
CCM2-208ENST00000476594 ARHGEF28Q8N1W1 1705 aaKnown RBP14.63□□□□□ -0.07
CCM2-208ENST00000476594 PXDNQ92626 1479 aa14.63□□□□□ -0.07
CCM2-208ENST00000476594 TULP4Q9NRJ4 1543 aa14.63□□□□□ -0.07
CCM2-208ENST00000476594 WASLO00401 505 aaPredicted RBP14.63□□□□□ -0.07
CCM2-208ENST00000476594 SIN3AQ96ST3 1273 aa14.63□□□□□ -0.07
CCM2-208ENST00000476594 HIRIP3Q9BW71 556 aaPredicted RBP14.63□□□□□ -0.07
CCM2-208ENST00000476594 RGS17Q9UGC6 210 aaPredicted RBP14.63□□□□□ -0.07
CCM2-208ENST00000476594 TONSLQ96HA7 1378 aa14.62□□□□□ -0.07
CCM2-208ENST00000476594 KRT28Q7Z3Y7 464 aa14.62□□□□□ -0.07
CCM2-208ENST00000476594 GPRASP1Q5JY77 1395 aa14.61□□□□□ -0.07
CCM2-208ENST00000476594 C8orf37Q96NL8 207 aa14.61□□□□□ -0.07
CCM2-208ENST00000476594 COL22A1Q8NFW1 1626 aaPredicted RBP14.61□□□□□ -0.07
CCM2-208ENST00000476594 HAP1P54257 671 aaPredicted RBP14.6□□□□□ -0.07
CCM2-208ENST00000476594 XPCQ01831 940 aaPredicted RBP14.6□□□□□ -0.07
CCM2-208ENST00000476594 POTEAQ6S8J7 498 aa14.6□□□□□ -0.07
CCM2-208ENST00000476594 NGLY1Q96IV0 654 aa14.6□□□□□ -0.07
CCM2-208ENST00000476594 AFF2P51816 1311 aa14.6□□□□□ -0.07
CCM2-208ENST00000476594 CENPJQ9HC77 1338 aaPredicted RBP14.6□□□□□ -0.07
CCM2-208ENST00000476594 ARHGEF10O15013 1369 aa14.6□□□□□ -0.07
CCM2-208ENST00000476594 ROCK2O75116 1388 aaKnown RBP14.6□□□□□ -0.07
CCM2-208ENST00000476594 TNS3Q68CZ2 1445 aa14.59□□□□□ -0.07
CCM2-208ENST00000476594 ADAMTS2O95450 1211 aa14.59□□□□□ -0.07
CCM2-208ENST00000476594 SPATA31A3Q5VYP0 1347 aa14.59□□□□□ -0.07
CCM2-208ENST00000476594 SBNO1A3KN83 1393 aa14.59□□□□□ -0.07
CCM2-208ENST00000476594 ITSN1Q15811 1721 aa14.58□□□□□ -0.07
CCM2-208ENST00000476594 NBPF1Q3BBV0 1214 aa14.58□□□□□ -0.08
CCM2-208ENST00000476594 NGDNQ8NEJ9 315 aaKnown RBP14.58□□□□□ -0.08
CCM2-208ENST00000476594 PMFBP1Q8TBY8 1022 aa14.58□□□□□ -0.08
CCM2-208ENST00000476594 RGPD8O14715 1765 aaPredicted RBP14.57□□□□□ -0.08
CCM2-208ENST00000476594 RXRBP28702 533 aa14.57□□□□□ -0.08
CCM2-208ENST00000476594 LMOD2Q6P5Q4 547 aa14.57□□□□□ -0.08
CCM2-208ENST00000476594 TRPM1Q7Z4N2 1603 aa14.56□□□□□ -0.08
CCM2-208ENST00000476594 USP32Q8NFA0 1604 aa14.56□□□□□ -0.08
CCM2-208ENST00000476594 NUDT16Q96DE0 195 aaKnown RBP14.55□□□□□ -0.08
CCM2-208ENST00000476594 CDK19Q9BWU1 502 aa14.55□□□□□ -0.08
CCM2-208ENST00000476594 ATP7BP35670 1465 aa14.55□□□□□ -0.08
CCM2-208ENST00000476594 SRPK2P78362 688 aaKnown RBP14.54□□□□□ -0.08
CCM2-208ENST00000476594 USP21Q9UK80 565 aa14.54□□□□□ -0.08
CCM2-208ENST00000476594 CCDC61Q9Y6R9 512 aa14.54□□□□□ -0.08
CCM2-208ENST00000476594 PRR36Q9H6K5 1346 aa14.54□□□□□ -0.08
CCM2-208ENST00000476594 CDK12Q9NYV4 1490 aaPredicted RBP14.53□□□□□ -0.08
CCM2-208ENST00000476594 RBM6P78332 1123 aaKnown RBP14.53□□□□□ -0.08
CCM2-208ENST00000476594 QTRT2Q9H974 415 aaKnown RBP14.53□□□□□ -0.08
CCM2-208ENST00000476594 TRPC5Q9UL62 973 aaPredicted RBP14.53□□□□□ -0.08
CCM2-208ENST00000476594 EVC2Q86UK5 1308 aa14.52□□□□□ -0.08
CCM2-208ENST00000476594 QRICH2Q9H0J4 1663 aa14.52□□□□□ -0.09
CCM2-208ENST00000476594 PAK3O75914 559 aaPredicted RBP14.51□□□□□ -0.09
CCM2-208ENST00000476594 FNBP4Q8N3X1 1017 aaPredicted RBP14.51□□□□□ -0.09
CCM2-208ENST00000476594 CARD11Q9BXL7 1154 aa14.51□□□□□ -0.09
CCM2-208ENST00000476594 MARF1Q9Y4F3 1742 aaKnown RBP14.5□□□□□ -0.09
CCM2-208ENST00000476594 CLSPNQ9HAW4 1339 aa14.49□□□□□ -0.09
CCM2-208ENST00000476594 PLEKHG3A1L390 1219 aa14.49□□□□□ -0.09
CCM2-208ENST00000476594 RALGAPBQ86X10 1494 aa14.49□□□□□ -0.09
CCM2-208ENST00000476594 TOPAZ1Q8N9V7 1692 aa14.49□□□□□ -0.09
CCM2-208ENST00000476594 POLR3AO14802 1390 aaPredicted RBP14.48□□□□□ -0.09
CCM2-208ENST00000476594 BRD4O60885 1362 aaPredicted RBP14.48□□□□□ -0.09
CCM2-208ENST00000476594 PPIP5K1Q6PFW1 1433 aa14.48□□□□□ -0.09
CCM2-208ENST00000476594 ACEP12821 1306 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms