RNA–Protein interactions for RNA: ENST00000476234.5

EXOSC1-208, Transcript of exosome component 1, humanhuman

TSL 2

Gene EXOSC1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC1-208ENST00000476234 KIF1BO60333 1816 aa16.81■□□□□ 0.28
EXOSC1-208ENST00000476234 VGFO15240 615 aaPredicted RBP16.8■□□□□ 0.28
EXOSC1-208ENST00000476234 USP21Q9UK80 565 aa16.8■□□□□ 0.28
EXOSC1-208ENST00000476234 TRPC5Q9UL62 973 aaPredicted RBP16.8■□□□□ 0.28
EXOSC1-208ENST00000476234 ATRNO75882 1429 aa16.79■□□□□ 0.28
EXOSC1-208ENST00000476234 HFM1A2PYH4 1435 aa16.79■□□□□ 0.28
EXOSC1-208ENST00000476234 RPGRIP1LQ68CZ1 1315 aa16.78■□□□□ 0.28
EXOSC1-208ENST00000476234 MYOM2P54296 1465 aa16.78■□□□□ 0.28
EXOSC1-208ENST00000476234 NAIPQ13075 1403 aa16.77■□□□□ 0.27
EXOSC1-208ENST00000476234 SRCAPQ6ZRS2 3230 aa16.76■□□□□ 0.27
EXOSC1-208ENST00000476234 CDC42BPGQ6DT37 1551 aa16.76■□□□□ 0.27
EXOSC1-208ENST00000476234 BCL9LQ86UU0 1499 aa16.75■□□□□ 0.27
EXOSC1-208ENST00000476234 PXDNQ92626 1479 aa16.75■□□□□ 0.27
EXOSC1-208ENST00000476234 NPHP3Q7Z494 1330 aa16.73■□□□□ 0.27
EXOSC1-208ENST00000476234 CCDC125Q86Z20 511 aa16.73■□□□□ 0.27
EXOSC1-208ENST00000476234 PPLO60437 1756 aa16.73■□□□□ 0.27
EXOSC1-208ENST00000476234 MARF1Q9Y4F3 1742 aaKnown RBP16.72■□□□□ 0.27
EXOSC1-208ENST00000476234 EP400Q96L91 3159 aa16.7■□□□□ 0.26
EXOSC1-208ENST00000476234 TECPR2O15040 1411 aa16.7■□□□□ 0.26
EXOSC1-208ENST00000476234 ESCO1Q5FWF5 840 aa16.69■□□□□ 0.26
EXOSC1-208ENST00000476234 ZRANB1Q9UGI0 708 aa16.69■□□□□ 0.26
EXOSC1-208ENST00000476234 GJD4Q96KN9 370 aaPredicted RBP16.68■□□□□ 0.26
EXOSC1-208ENST00000476234 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.67■□□□□ 0.26
EXOSC1-208ENST00000476234 FOXO3O43524 673 aa16.67■□□□□ 0.26
EXOSC1-208ENST00000476234 LRPPRCP42704 1394 aaKnown RBP16.66■□□□□ 0.26
EXOSC1-208ENST00000476234 SLIT2O94813 1529 aa16.66■□□□□ 0.26
EXOSC1-208ENST00000476234 DCAF8L1A6NGE4 600 aa16.66■□□□□ 0.26
EXOSC1-208ENST00000476234 ABCC11Q96J66 1382 aa16.64■□□□□ 0.26
EXOSC1-208ENST00000476234 GLI3P10071 1580 aa16.64■□□□□ 0.25
EXOSC1-208ENST00000476234 SLC4A1APQ9BWU0 796 aaKnown RBP16.64■□□□□ 0.25
EXOSC1-208ENST00000476234 ADGRF5Q8IZF2 1346 aa16.64■□□□□ 0.25
EXOSC1-208ENST00000476234 SPATA31E1Q6ZUB1 1445 aa16.63■□□□□ 0.25
EXOSC1-208ENST00000476234 RALGAPBQ86X10 1494 aa16.63■□□□□ 0.25
EXOSC1-208ENST00000476234 XPCQ01831 940 aaPredicted RBP16.63■□□□□ 0.25
EXOSC1-208ENST00000476234 UNC5CLQ8IV45 518 aa16.63■□□□□ 0.25
EXOSC1-208ENST00000476234 SPATA31A3Q5VYP0 1347 aa16.63■□□□□ 0.25
EXOSC1-208ENST00000476234 KNDC1Q76NI1 1749 aa16.62■□□□□ 0.25
EXOSC1-208ENST00000476234 WAPLQ7Z5K2 1190 aa16.62■□□□□ 0.25
EXOSC1-208ENST00000476234 RNF39Q9H2S5 420 aa16.62■□□□□ 0.25
EXOSC1-208ENST00000476234 FMN2Q9NZ56 1722 aa16.62■□□□□ 0.25
EXOSC1-208ENST00000476234 BLMP54132 1417 aaPredicted RBP16.62■□□□□ 0.25
EXOSC1-208ENST00000476234 KIF1AQ12756 1690 aa16.61■□□□□ 0.25
EXOSC1-208ENST00000476234 IFT172Q9UG01 1749 aa16.61■□□□□ 0.25
EXOSC1-208ENST00000476234 ANKRD30BQ9BXX2 1392 aa16.61■□□□□ 0.25
EXOSC1-208ENST00000476234 PLEKHH1Q9ULM0 1364 aa16.61■□□□□ 0.25
EXOSC1-208ENST00000476234 SIRT1Q96EB6 747 aa16.6■□□□□ 0.25
EXOSC1-208ENST00000476234 CCDC144AA2RUR9 1427 aa16.6■□□□□ 0.25
EXOSC1-208ENST00000476234 USP32Q8NFA0 1604 aa16.59■□□□□ 0.25
EXOSC1-208ENST00000476234 PIK3C2GO75747 1445 aa16.59■□□□□ 0.25
EXOSC1-208ENST00000476234 ONECUT3O60422 494 aaPredicted RBP16.58■□□□□ 0.24
EXOSC1-208ENST00000476234 STK26Q9P289 416 aa16.58■□□□□ 0.24
EXOSC1-208ENST00000476234 NUTM2FA1L443 756 aa16.57■□□□□ 0.24
EXOSC1-208ENST00000476234 BRWD3Q6RI45 1802 aa16.56■□□□□ 0.24
EXOSC1-208ENST00000476234 YTHDC2Q9H6S0 1430 aaKnown RBP16.56■□□□□ 0.24
EXOSC1-208ENST00000476234 TMEM132EQ6IEE7 984 aa16.56■□□□□ 0.24
EXOSC1-208ENST00000476234 KRT28Q7Z3Y7 464 aa16.56■□□□□ 0.24
EXOSC1-208ENST00000476234 VPS72Q15906 364 aa16.55■□□□□ 0.24
EXOSC1-208ENST00000476234 TNS3Q68CZ2 1445 aa16.54■□□□□ 0.24
EXOSC1-208ENST00000476234 NWD2Q9ULI1 1742 aa16.54■□□□□ 0.24
EXOSC1-208ENST00000476234 RGL3Q3MIN7 710 aa16.54■□□□□ 0.24
EXOSC1-208ENST00000476234 SBNO1A3KN83 1393 aa16.53■□□□□ 0.24
EXOSC1-208ENST00000476234 DEFB132Q7Z7B7 95 aa16.53■□□□□ 0.24
EXOSC1-208ENST00000476234 SEPT12Q8IYM1 358 aa16.53■□□□□ 0.24
EXOSC1-208ENST00000476234 PHF8Q9UPP1 1060 aa16.53■□□□□ 0.24
EXOSC1-208ENST00000476234 C14orf93Q9H972 538 aaKnown RBP16.52■□□□□ 0.24
EXOSC1-208ENST00000476234 NRXN1Q9ULB1 1477 aa16.52■□□□□ 0.23
EXOSC1-208ENST00000476234 PLCH1Q4KWH8 1693 aa16.52■□□□□ 0.23
EXOSC1-208ENST00000476234 ABCA3Q99758 1704 aa16.51■□□□□ 0.23
EXOSC1-208ENST00000476234 PSME1Q06323 249 aa16.51■□□□□ 0.23
EXOSC1-208ENST00000476234 LRP5O75197 1615 aa16.51■□□□□ 0.23
EXOSC1-208ENST00000476234 RGPD8O14715 1765 aaPredicted RBP16.51■□□□□ 0.23
EXOSC1-208ENST00000476234 CABLES1Q8TDN4 633 aa16.5■□□□□ 0.23
EXOSC1-208ENST00000476234 MPHOSPH9Q99550 1183 aa16.5■□□□□ 0.23
EXOSC1-208ENST00000476234 ARHGEF10O15013 1369 aa16.49■□□□□ 0.23
EXOSC1-208ENST00000476234 KRT27Q7Z3Y8 459 aa16.48■□□□□ 0.23
EXOSC1-208ENST00000476234 ANKARQ7Z5J8 1434 aa16.47■□□□□ 0.23
EXOSC1-208ENST00000476234 FAM83GA6ND36 823 aa16.47■□□□□ 0.23
EXOSC1-208ENST00000476234 SF3B2Q13435 895 aaKnown RBP16.47■□□□□ 0.23
EXOSC1-208ENST00000476234 HOXD11P31277 338 aaPredicted RBP16.46■□□□□ 0.23
EXOSC1-208ENST00000476234 DHX57Q6P158 1386 aaKnown RBP16.46■□□□□ 0.23
EXOSC1-208ENST00000476234 DLC1Q96QB1 1528 aa16.45■□□□□ 0.22
EXOSC1-208ENST00000476234 NRAPQ86VF7 1730 aa16.45■□□□□ 0.22
EXOSC1-208ENST00000476234 HAP1P54257 671 aaPredicted RBP16.45■□□□□ 0.22
EXOSC1-208ENST00000476234 ADGRB2O60241 1585 aa16.44■□□□□ 0.22
EXOSC1-208ENST00000476234 CFAP70Q5T0N1 1121 aa16.44■□□□□ 0.22
EXOSC1-208ENST00000476234 TRPM3Q9HCF6 1732 aaPredicted RBP16.44■□□□□ 0.22
EXOSC1-208ENST00000476234 PRAM1Q96QH2 718 aa16.43■□□□□ 0.22
EXOSC1-208ENST00000476234 CCDC9Q9Y3X0 531 aaKnown RBP16.42■□□□□ 0.22
EXOSC1-208ENST00000476234 ALS2Q96Q42 1657 aa16.42■□□□□ 0.22
EXOSC1-208ENST00000476234 RAB3GAP2Q9H2M9 1393 aa16.41■□□□□ 0.22
EXOSC1-208ENST00000476234 BAG6P46379 1132 aa16.41■□□□□ 0.22
EXOSC1-208ENST00000476234 ADGRB1O14514 1584 aa16.4■□□□□ 0.22
EXOSC1-208ENST00000476234 HRCP23327 699 aa16.4■□□□□ 0.22
EXOSC1-208ENST00000476234 LMOD2Q6P5Q4 547 aa16.4■□□□□ 0.22
EXOSC1-208ENST00000476234 COL14A1Q05707 1796 aaKnown RBP16.4■□□□□ 0.22
EXOSC1-208ENST00000476234 DISP2A7MBM2 1401 aa16.39■□□□□ 0.21
EXOSC1-208ENST00000476234 FAM98CQ17RN3 349 aaKnown RBP16.39■□□□□ 0.21
EXOSC1-208ENST00000476234 PMFBP1Q8TBY8 1022 aa16.39■□□□□ 0.21
EXOSC1-208ENST00000476234 BTG4Q9NY30 223 aa16.39■□□□□ 0.21
EXOSC1-208ENST00000476234 ACIN1Q9UKV3 1341 aaKnown RBP16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms