RNA–Protein interactions for RNA: ENST00000476016.1

GABRE-207, Transcript of gamma-aminobutyric acid type A receptor epsilon subunit, humanhuman

TSL 4

Gene GABRE, Length 813 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRE-207ENST00000476016 PTCH1Q13635 1447 aa11.28□□□□□ -0.6
GABRE-207ENST00000476016 ADGRB2O60241 1585 aa11.28□□□□□ -0.6
GABRE-207ENST00000476016 SIPA1L2Q9P2F8 1722 aaPredicted RBP11.27□□□□□ -0.61
GABRE-207ENST00000476016 CCER2I3L3R5 266 aa11.27□□□□□ -0.61
GABRE-207ENST00000476016 PRAM1Q96QH2 718 aa11.27□□□□□ -0.61
GABRE-207ENST00000476016 ROBO2Q9HCK4 1378 aa11.27□□□□□ -0.61
GABRE-207ENST00000476016 NPC1L1Q9UHC9 1359 aa11.27□□□□□ -0.61
GABRE-207ENST00000476016 LMTK3Q96Q04 1460 aa11.26□□□□□ -0.61
GABRE-207ENST00000476016 SLC26A8Q96RN1 970 aa11.26□□□□□ -0.61
GABRE-207ENST00000476016 PRKRIP1Q9H875 184 aaPredicted RBP11.26□□□□□ -0.61
GABRE-207ENST00000476016 EVC2Q86UK5 1308 aa11.26□□□□□ -0.61
GABRE-207ENST00000476016 KTN1Q86UP2 1357 aaKnown RBP11.26□□□□□ -0.61
GABRE-207ENST00000476016 STRCQ7RTU9 1775 aa11.26□□□□□ -0.61
GABRE-207ENST00000476016 STK26Q9P289 416 aa11.25□□□□□ -0.61
GABRE-207ENST00000476016 PLEKHH1Q9ULM0 1364 aa11.25□□□□□ -0.61
GABRE-207ENST00000476016 NINLQ9Y2I6 1382 aa11.25□□□□□ -0.61
GABRE-207ENST00000476016 NPHP4O75161 1426 aaPredicted RBP11.25□□□□□ -0.61
GABRE-207ENST00000476016 NWD1Q149M9 1564 aa11.24□□□□□ -0.61
GABRE-207ENST00000476016 WAPLQ7Z5K2 1190 aa11.24□□□□□ -0.61
GABRE-207ENST00000476016 PANK3Q9H999 370 aa11.24□□□□□ -0.61
GABRE-207ENST00000476016 AMOTL2Q9Y2J4 779 aa11.23□□□□□ -0.61
GABRE-207ENST00000476016 USP32Q8NFA0 1604 aa11.23□□□□□ -0.61
GABRE-207ENST00000476016 ANP32CO43423 234 aa11.22□□□□□ -0.61
GABRE-207ENST00000476016 AMER1Q5JTC6 1135 aaPredicted RBP11.22□□□□□ -0.61
GABRE-207ENST00000476016 CARD14Q9BXL6 1004 aa11.22□□□□□ -0.61
GABRE-207ENST00000476016 POGKQ9P215 609 aa11.22□□□□□ -0.61
GABRE-207ENST00000476016 CD163L1Q9NR16 1453 aa11.21□□□□□ -0.61
GABRE-207ENST00000476016 ATAD2Q6PL18 1390 aa11.21□□□□□ -0.61
GABRE-207ENST00000476016 PARD3Q8TEW0 1356 aa11.21□□□□□ -0.61
GABRE-207ENST00000476016 WASLO00401 505 aaPredicted RBP11.21□□□□□ -0.61
GABRE-207ENST00000476016 CDK19Q9BWU1 502 aa11.21□□□□□ -0.61
GABRE-207ENST00000476016 NCKAP5LQ9HCH0 1330 aa11.2□□□□□ -0.62
GABRE-207ENST00000476016 KCNA6P17658 529 aa11.2□□□□□ -0.62
GABRE-207ENST00000476016 SLC12A5Q9H2X9 1139 aa11.2□□□□□ -0.62
GABRE-207ENST00000476016 RALBP1Q15311 655 aa11.19□□□□□ -0.62
GABRE-207ENST00000476016 TOPAZ1Q8N9V7 1692 aa11.19□□□□□ -0.62
GABRE-207ENST00000476016 CPSF1Q10570 1443 aaKnown RBP11.18□□□□□ -0.62
GABRE-207ENST00000476016 STRCP1A6NGW2 1772 aa11.18□□□□□ -0.62
GABRE-207ENST00000476016 ANKRD36BQ8N2N9 1353 aa11.18□□□□□ -0.62
GABRE-207ENST00000476016 MINK1Q8N4C8 1332 aaPredicted RBP11.18□□□□□ -0.62
GABRE-207ENST00000476016 BCANQ96GW7 911 aa11.18□□□□□ -0.62
GABRE-207ENST00000476016 AKAP12Q02952 1782 aa11.18□□□□□ -0.62
GABRE-207ENST00000476016 NCOA3Q9Y6Q9 1424 aa11.18□□□□□ -0.62
GABRE-207ENST00000476016 CABP2Q9NPB3 220 aa11.17□□□□□ -0.62
GABRE-207ENST00000476016 ATP7BP35670 1465 aa11.17□□□□□ -0.62
GABRE-207ENST00000476016 RGPD8O14715 1765 aaPredicted RBP11.16□□□□□ -0.62
GABRE-207ENST00000476016 FMN2Q9NZ56 1722 aa11.16□□□□□ -0.62
GABRE-207ENST00000476016 PLEKHG3A1L390 1219 aa11.16□□□□□ -0.62
GABRE-207ENST00000476016 SAFB2Q14151 953 aaKnown RBP eCLIP11.16□□□□□ -0.62
GABRE-207ENST00000476016 CCDC61Q9Y6R9 512 aa11.16□□□□□ -0.62
GABRE-207ENST00000476016 NKTRP30414 1462 aaKnown RBP11.16□□□□□ -0.62
GABRE-207ENST00000476016 CDC42BPGQ6DT37 1551 aa11.16□□□□□ -0.62
GABRE-207ENST00000476016 MON2Q7Z3U7 1717 aa11.15□□□□□ -0.62
GABRE-207ENST00000476016 NALCNQ8IZF0 1738 aa11.15□□□□□ -0.62
GABRE-207ENST00000476016 PRR36Q9H6K5 1346 aa11.15□□□□□ -0.62
GABRE-207ENST00000476016 ANKARQ7Z5J8 1434 aa11.15□□□□□ -0.62
GABRE-207ENST00000476016 SRPK2P78362 688 aaKnown RBP11.14□□□□□ -0.63
GABRE-207ENST00000476016 NUDT16Q96DE0 195 aaKnown RBP11.14□□□□□ -0.63
GABRE-207ENST00000476016 POLR3GLQ9BT43 218 aa11.14□□□□□ -0.63
GABRE-207ENST00000476016 KNSTRNQ9Y448 316 aa11.14□□□□□ -0.63
GABRE-207ENST00000476016 ITSN1Q15811 1721 aa11.14□□□□□ -0.63
GABRE-207ENST00000476016 ANKRD26Q9UPS8 1709 aa11.14□□□□□ -0.63
GABRE-207ENST00000476016 A0A1W2PP64 1363 aa11.14□□□□□ -0.63
GABRE-207ENST00000476016 XIRP1Q702N8 1843 aaKnown RBP11.14□□□□□ -0.63
GABRE-207ENST00000476016 SSH2Q76I76 1423 aa11.13□□□□□ -0.63
GABRE-207ENST00000476016 ADGRL3Q9HAR2 1447 aa11.13□□□□□ -0.63
GABRE-207ENST00000476016 HSPA2P54652 639 aa11.13□□□□□ -0.63
GABRE-207ENST00000476016 CNKSR2Q8WXI2 1034 aa11.13□□□□□ -0.63
GABRE-207ENST00000476016 CABP1Q9NZU7 370 aa11.13□□□□□ -0.63
GABRE-207ENST00000476016 NSD2O96028 1365 aa11.13□□□□□ -0.63
GABRE-207ENST00000476016 MYBBP1AQ9BQG0 1328 aaKnown RBP11.12□□□□□ -0.63
GABRE-207ENST00000476016 CCDC184Q52MB2 194 aa11.12□□□□□ -0.63
GABRE-207ENST00000476016 TERF2IPQ9NYB0 399 aa11.12□□□□□ -0.63
GABRE-207ENST00000476016 POLR3AO14802 1390 aaPredicted RBP11.12□□□□□ -0.63
GABRE-207ENST00000476016 BRD4O60885 1362 aaPredicted RBP11.12□□□□□ -0.63
GABRE-207ENST00000476016 ZNF692Q9BU19 519 aaPredicted RBP11.11□□□□□ -0.63
GABRE-207ENST00000476016 PPIP5K1Q6PFW1 1433 aa11.1□□□□□ -0.63
GABRE-207ENST00000476016 NSD3Q9BZ95 1437 aa11.1□□□□□ -0.63
GABRE-207ENST00000476016 NLRP13Q86W25 1043 aa11.1□□□□□ -0.63
GABRE-207ENST00000476016 TMC1Q8TDI8 760 aa11.1□□□□□ -0.63
GABRE-207ENST00000476016 PNISRQ8TF01 805 aaKnown RBP11.1□□□□□ -0.63
GABRE-207ENST00000476016 INSRP06213 1382 aa11.1□□□□□ -0.63
GABRE-207ENST00000476016 NRKQ7Z2Y5 1582 aa11.1□□□□□ -0.63
GABRE-207ENST00000476016 FYB1O15117 783 aa11.09□□□□□ -0.63
GABRE-207ENST00000476016 KIF20BQ96Q89 1820 aa11.09□□□□□ -0.63
GABRE-207ENST00000476016 DCCP43146 1447 aa11.09□□□□□ -0.63
GABRE-207ENST00000476016 EDC4Q6P2E9 1401 aaKnown RBP11.09□□□□□ -0.63
GABRE-207ENST00000476016 CGNL1Q0VF96 1302 aa11.09□□□□□ -0.63
GABRE-207ENST00000476016 PPP2R1AP30153 589 aa11.08□□□□□ -0.64
GABRE-207ENST00000476016 C19orf44Q9H6X5 657 aa11.08□□□□□ -0.64
GABRE-207ENST00000476016 USP54Q70EL1 1684 aa11.08□□□□□ -0.64
GABRE-207ENST00000476016 CC2D1BQ5T0F9 858 aaKnown RBP11.06□□□□□ -0.64
GABRE-207ENST00000476016 HDGFL2Q7Z4V5 671 aaPredicted RBP11.06□□□□□ -0.64
GABRE-207ENST00000476016 USP6P35125 1406 aa11.06□□□□□ -0.64
GABRE-207ENST00000476016 LRRC7Q96NW7 1537 aa11.05□□□□□ -0.64
GABRE-207ENST00000476016 NCBP3Q53F19 620 aaKnown RBP11.05□□□□□ -0.64
GABRE-207ENST00000476016 PROSER2Q86WR7 435 aaPredicted RBP11.05□□□□□ -0.64
GABRE-207ENST00000476016 ACEP12821 1306 aa11.05□□□□□ -0.64
GABRE-207ENST00000476016 MAP2P11137 1827 aaKnown RBP11.05□□□□□ -0.64
GABRE-207ENST00000476016 MST1RQ04912 1400 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms