RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-222ENST00000475580 SIRT1Q96EB6 747 aa24.11■■□□□ 1.45
VPS8-222ENST00000475580 DLC1Q96QB1 1528 aa24.1■■□□□ 1.45
VPS8-222ENST00000475580 SIN3AQ96ST3 1273 aa24.06■■□□□ 1.44
VPS8-222ENST00000475580 JCADQ9P266 1359 aa24.05■■□□□ 1.44
VPS8-222ENST00000475580 ILDR2Q71H61 639 aa24.04■■□□□ 1.44
VPS8-222ENST00000475580 ORAI2Q96SN7 254 aa24.04■■□□□ 1.44
VPS8-222ENST00000475580 FMN2Q9NZ56 1722 aa24.04■■□□□ 1.44
VPS8-222ENST00000475580 DDX17Q92841 729 aaKnown RBP24.03■■□□□ 1.44
VPS8-222ENST00000475580 PRAM1Q96QH2 718 aa24.03■■□□□ 1.44
VPS8-222ENST00000475580 KIAA1210Q9ULL0 1709 aa24.03■■□□□ 1.44
VPS8-222ENST00000475580 SHPRHQ149N8 1683 aa24.02■■□□□ 1.44
VPS8-222ENST00000475580 L3MBTL2Q969R5 705 aa24■■□□□ 1.43
VPS8-222ENST00000475580 TRAK1Q9UPV9 953 aa24■■□□□ 1.43
VPS8-222ENST00000475580 ARHGEF28Q8N1W1 1705 aaKnown RBP23.98■■□□□ 1.43
VPS8-222ENST00000475580 SAFB2Q14151 953 aaKnown RBP eCLIP23.98■■□□□ 1.43
VPS8-222ENST00000475580 ADGRB2O60241 1585 aa23.98■■□□□ 1.43
VPS8-222ENST00000475580 NUTM2FA1L443 756 aa23.96■■□□□ 1.43
VPS8-222ENST00000475580 NEUROD1Q13562 356 aa23.96■■□□□ 1.43
VPS8-222ENST00000475580 POGKQ9P215 609 aa23.96■■□□□ 1.43
VPS8-222ENST00000475580 LRP6O75581 1613 aa23.95■■□□□ 1.43
VPS8-222ENST00000475580 SOS2Q07890 1332 aaPredicted RBP23.94■■□□□ 1.42
VPS8-222ENST00000475580 NBPF1Q3BBV0 1214 aa23.94■■□□□ 1.42
VPS8-222ENST00000475580 ESCO1Q5FWF5 840 aa23.94■■□□□ 1.42
VPS8-222ENST00000475580 RGPD8O14715 1765 aaPredicted RBP23.93■■□□□ 1.42
VPS8-222ENST00000475580 SPATA31A6Q5VVP1 1343 aa23.93■■□□□ 1.42
VPS8-222ENST00000475580 PHF23Q9BUL5 403 aaPredicted RBP23.93■■□□□ 1.42
VPS8-222ENST00000475580 RGS17Q9UGC6 210 aaPredicted RBP23.93■■□□□ 1.42
VPS8-222ENST00000475580 LRRC59Q96AG4 307 aaKnown RBP23.92■■□□□ 1.42
VPS8-222ENST00000475580 USP32Q8NFA0 1604 aa23.92■■□□□ 1.42
VPS8-222ENST00000475580 PNPLA6Q8IY17 1366 aa23.91■■□□□ 1.42
VPS8-222ENST00000475580 PXDNQ92626 1479 aa23.9■■□□□ 1.42
VPS8-222ENST00000475580 KIF1AQ12756 1690 aa23.89■■□□□ 1.42
VPS8-222ENST00000475580 TRPM1Q7Z4N2 1603 aa23.89■■□□□ 1.42
VPS8-222ENST00000475580 MINK1Q8N4C8 1332 aaPredicted RBP23.88■■□□□ 1.41
VPS8-222ENST00000475580 HIRIP3Q9BW71 556 aaPredicted RBP23.88■■□□□ 1.41
VPS8-222ENST00000475580 NPHP3Q7Z494 1330 aa23.87■■□□□ 1.41
VPS8-222ENST00000475580 ANKARQ7Z5J8 1434 aa23.87■■□□□ 1.41
VPS8-222ENST00000475580 FOXO3O43524 673 aa23.86■■□□□ 1.41
VPS8-222ENST00000475580 TULP4Q9NRJ4 1543 aa23.84■■□□□ 1.41
VPS8-222ENST00000475580 PRR36Q9H6K5 1346 aa23.84■■□□□ 1.41
VPS8-222ENST00000475580 WASLO00401 505 aaPredicted RBP23.83■■□□□ 1.41
VPS8-222ENST00000475580 XPCQ01831 940 aaPredicted RBP23.83■■□□□ 1.41
VPS8-222ENST00000475580 COL22A1Q8NFW1 1626 aaPredicted RBP23.82■■□□□ 1.4
VPS8-222ENST00000475580 PHF8Q9UPP1 1060 aa23.82■■□□□ 1.4
VPS8-222ENST00000475580 NUTM2BA6NNL0 878 aaPredicted RBP23.81■■□□□ 1.4
VPS8-222ENST00000475580 NUTM2EB1AL46 878 aaPredicted RBP23.81■■□□□ 1.4
VPS8-222ENST00000475580 NBPF8Q3BBV2 869 aa23.81■■□□□ 1.4
VPS8-222ENST00000475580 NUTM2AQ8IVF1 878 aaPredicted RBP23.81■■□□□ 1.4
VPS8-222ENST00000475580 EIF3AQ14152 1382 aaKnown RBP23.78■■□□□ 1.4
VPS8-222ENST00000475580 POTEAQ6S8J7 498 aa23.78■■□□□ 1.4
VPS8-222ENST00000475580 ATP7BP35670 1465 aa23.77■■□□□ 1.4
VPS8-222ENST00000475580 MEX3CQ5U5Q3 659 aaKnown RBP23.77■■□□□ 1.4
VPS8-222ENST00000475580 TONSLQ96HA7 1378 aa23.77■■□□□ 1.4
VPS8-222ENST00000475580 KRT28Q7Z3Y7 464 aa23.76■■□□□ 1.39
VPS8-222ENST00000475580 PMFBP1Q8TBY8 1022 aa23.75■■□□□ 1.39
VPS8-222ENST00000475580 PCGF6Q9BYE7 350 aa23.75■■□□□ 1.39
VPS8-222ENST00000475580 QRICH2Q9H0J4 1663 aa23.75■■□□□ 1.39
VPS8-222ENST00000475580 CENPJQ9HC77 1338 aaPredicted RBP23.75■■□□□ 1.39
VPS8-222ENST00000475580 ROCK2O75116 1388 aaKnown RBP23.75■■□□□ 1.39
VPS8-222ENST00000475580 GPRASP1Q5JY77 1395 aa23.75■■□□□ 1.39
VPS8-222ENST00000475580 SOCS7O14512 581 aa23.74■■□□□ 1.39
VPS8-222ENST00000475580 SPATA31A3Q5VYP0 1347 aa23.74■■□□□ 1.39
VPS8-222ENST00000475580 CDK19Q9BWU1 502 aa23.73■■□□□ 1.39
VPS8-222ENST00000475580 TOPAZ1Q8N9V7 1692 aa23.73■■□□□ 1.39
VPS8-222ENST00000475580 ITSN1Q15811 1721 aa23.73■■□□□ 1.39
VPS8-222ENST00000475580 TRPM3Q9HCF6 1732 aaPredicted RBP23.71■■□□□ 1.39
VPS8-222ENST00000475580 TNS3Q68CZ2 1445 aa23.71■■□□□ 1.39
VPS8-222ENST00000475580 SBNO1A3KN83 1393 aa23.71■■□□□ 1.39
VPS8-222ENST00000475580 NUDT16Q96DE0 195 aaKnown RBP23.71■■□□□ 1.39
VPS8-222ENST00000475580 RALGAPBQ86X10 1494 aa23.7■■□□□ 1.38
VPS8-222ENST00000475580 ADAMTS2O95450 1211 aa23.68■■□□□ 1.38
VPS8-222ENST00000475580 PSME1Q06323 249 aa23.68■■□□□ 1.38
VPS8-222ENST00000475580 AFF2P51816 1311 aa23.67■■□□□ 1.38
VPS8-222ENST00000475580 ZNF772Q68DY9 489 aaPredicted RBP23.67■■□□□ 1.38
VPS8-222ENST00000475580 C8orf37Q96NL8 207 aa23.67■■□□□ 1.38
VPS8-222ENST00000475580 MARF1Q9Y4F3 1742 aaKnown RBP23.67■■□□□ 1.38
VPS8-222ENST00000475580 ALS2Q96Q42 1657 aa23.65■■□□□ 1.38
VPS8-222ENST00000475580 ABCA3Q99758 1704 aa23.64■■□□□ 1.37
VPS8-222ENST00000475580 CCDC61Q9Y6R9 512 aa23.63■■□□□ 1.37
VPS8-222ENST00000475580 NGDNQ8NEJ9 315 aaKnown RBP23.62■■□□□ 1.37
VPS8-222ENST00000475580 CARD11Q9BXL7 1154 aa23.62■■□□□ 1.37
VPS8-222ENST00000475580 CABP2Q9NPB3 220 aa23.62■■□□□ 1.37
VPS8-222ENST00000475580 POLR3AO14802 1390 aaPredicted RBP23.62■■□□□ 1.37
VPS8-222ENST00000475580 ARHGEF10O15013 1369 aa23.62■■□□□ 1.37
VPS8-222ENST00000475580 PLEKHG3A1L390 1219 aa23.61■■□□□ 1.37
VPS8-222ENST00000475580 SRPK2P78362 688 aaKnown RBP23.6■■□□□ 1.37
VPS8-222ENST00000475580 NGLY1Q96IV0 654 aa23.6■■□□□ 1.37
VPS8-222ENST00000475580 CLSPNQ9HAW4 1339 aa23.59■■□□□ 1.37
VPS8-222ENST00000475580 ACEP12821 1306 aa23.59■■□□□ 1.37
VPS8-222ENST00000475580 FNBP4Q8N3X1 1017 aaPredicted RBP23.58■■□□□ 1.37
VPS8-222ENST00000475580 CABLES1Q8TDN4 633 aa23.58■■□□□ 1.37
VPS8-222ENST00000475580 PPIP5K1Q6PFW1 1433 aa23.58■■□□□ 1.36
VPS8-222ENST00000475580 SBNO2Q9Y2G9 1366 aa23.57■■□□□ 1.36
VPS8-222ENST00000475580 CRYBG1Q9Y4K1 1723 aa23.57■■□□□ 1.36
VPS8-222ENST00000475580 LMOD2Q6P5Q4 547 aa23.57■■□□□ 1.36
VPS8-222ENST00000475580 EVC2Q86UK5 1308 aa23.57■■□□□ 1.36
VPS8-222ENST00000475580 BCL9LQ86UU0 1499 aa23.55■■□□□ 1.36
VPS8-222ENST00000475580 USP21Q9UK80 565 aa23.54■■□□□ 1.36
VPS8-222ENST00000475580 PLEKHG5O94827 1062 aa23.53■■□□□ 1.36
VPS8-222ENST00000475580 RXRBP28702 533 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms