RNA–Protein interactions for RNA: ENST00000475482.5

CPSF3-203, Transcript of cleavage and polyadenylation specific factor 3, humanhuman

TSL 4

Gene CPSF3, Length 871 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF3-203ENST00000475482 CFAP70Q5T0N1 1121 aa22.79■■□□□ 1.24
CPSF3-203ENST00000475482 STAC3Q96MF2 364 aa22.78■■□□□ 1.24
CPSF3-203ENST00000475482 STK26Q9P289 416 aa22.78■■□□□ 1.24
CPSF3-203ENST00000475482 WAPLQ7Z5K2 1190 aa22.77■■□□□ 1.24
CPSF3-203ENST00000475482 PLEKHH1Q9ULM0 1364 aa22.76■■□□□ 1.23
CPSF3-203ENST00000475482 LRP6O75581 1613 aa22.76■■□□□ 1.23
CPSF3-203ENST00000475482 ADGRB1O14514 1584 aa22.76■■□□□ 1.23
CPSF3-203ENST00000475482 DHX57Q6P158 1386 aaKnown RBP22.76■■□□□ 1.23
CPSF3-203ENST00000475482 ORAI2Q96SN7 254 aa22.75■■□□□ 1.23
CPSF3-203ENST00000475482 LRRC59Q96AG4 307 aaKnown RBP22.74■■□□□ 1.23
CPSF3-203ENST00000475482 DDX17Q92841 729 aaKnown RBP22.73■■□□□ 1.23
CPSF3-203ENST00000475482 SOS2Q07890 1332 aaPredicted RBP22.73■■□□□ 1.23
CPSF3-203ENST00000475482 DLC1Q96QB1 1528 aa22.72■■□□□ 1.23
CPSF3-203ENST00000475482 CCER1Q8TC90 406 aaPredicted RBP22.72■■□□□ 1.23
CPSF3-203ENST00000475482 DCAF11Q8TEB1 546 aa22.71■■□□□ 1.23
CPSF3-203ENST00000475482 FMN2Q9NZ56 1722 aa22.71■■□□□ 1.23
CPSF3-203ENST00000475482 PNPLA6Q8IY17 1366 aa22.69■■□□□ 1.22
CPSF3-203ENST00000475482 POTEAQ6S8J7 498 aa22.69■■□□□ 1.22
CPSF3-203ENST00000475482 ZEB1P37275 1124 aaPredicted RBP22.68■■□□□ 1.22
CPSF3-203ENST00000475482 KDM2AQ9Y2K7 1162 aa22.67■■□□□ 1.22
CPSF3-203ENST00000475482 ESCO1Q5FWF5 840 aa22.64■■□□□ 1.21
CPSF3-203ENST00000475482 PRAM1Q96QH2 718 aa22.64■■□□□ 1.21
CPSF3-203ENST00000475482 PXDNQ92626 1479 aa22.63■■□□□ 1.21
CPSF3-203ENST00000475482 NPHP3Q7Z494 1330 aa22.62■■□□□ 1.21
CPSF3-203ENST00000475482 RGPD8O14715 1765 aaPredicted RBP22.62■■□□□ 1.21
CPSF3-203ENST00000475482 ADGRB2O60241 1585 aa22.62■■□□□ 1.21
CPSF3-203ENST00000475482 COL22A1Q8NFW1 1626 aaPredicted RBP22.6■■□□□ 1.21
CPSF3-203ENST00000475482 KIAA1210Q9ULL0 1709 aa22.6■■□□□ 1.21
CPSF3-203ENST00000475482 KIF1AQ12756 1690 aa22.6■■□□□ 1.21
CPSF3-203ENST00000475482 CLSPNQ9HAW4 1339 aa22.59■■□□□ 1.21
CPSF3-203ENST00000475482 NUTM2FA1L443 756 aa22.59■■□□□ 1.21
CPSF3-203ENST00000475482 NUTM2BA6NNL0 878 aaPredicted RBP22.59■■□□□ 1.21
CPSF3-203ENST00000475482 NUTM2EB1AL46 878 aaPredicted RBP22.59■■□□□ 1.21
CPSF3-203ENST00000475482 FOXO3O43524 673 aa22.59■■□□□ 1.21
CPSF3-203ENST00000475482 NUTM2AQ8IVF1 878 aaPredicted RBP22.59■■□□□ 1.21
CPSF3-203ENST00000475482 MEX3CQ5U5Q3 659 aaKnown RBP22.58■■□□□ 1.21
CPSF3-203ENST00000475482 ZNF772Q68DY9 489 aaPredicted RBP22.58■■□□□ 1.21
CPSF3-203ENST00000475482 TRAK1Q9UPV9 953 aa22.58■■□□□ 1.21
CPSF3-203ENST00000475482 POGKQ9P215 609 aa22.57■■□□□ 1.2
CPSF3-203ENST00000475482 SAFB2Q14151 953 aaKnown RBP eCLIP22.56■■□□□ 1.2
CPSF3-203ENST00000475482 ARHGEF28Q8N1W1 1705 aaKnown RBP22.56■■□□□ 1.2
CPSF3-203ENST00000475482 USP32Q8NFA0 1604 aa22.56■■□□□ 1.2
CPSF3-203ENST00000475482 ANKARQ7Z5J8 1434 aa22.56■■□□□ 1.2
CPSF3-203ENST00000475482 PHF8Q9UPP1 1060 aa22.52■■□□□ 1.2
CPSF3-203ENST00000475482 AFF2P51816 1311 aa22.52■■□□□ 1.2
CPSF3-203ENST00000475482 XPCQ01831 940 aaPredicted RBP22.51■■□□□ 1.19
CPSF3-203ENST00000475482 SPATA31A3Q5VYP0 1347 aa22.5■■□□□ 1.19
CPSF3-203ENST00000475482 TULP4Q9NRJ4 1543 aa22.48■■□□□ 1.19
CPSF3-203ENST00000475482 WASLO00401 505 aaPredicted RBP22.48■■□□□ 1.19
CPSF3-203ENST00000475482 MINK1Q8N4C8 1332 aaPredicted RBP22.48■■□□□ 1.19
CPSF3-203ENST00000475482 MARF1Q9Y4F3 1742 aaKnown RBP22.48■■□□□ 1.19
CPSF3-203ENST00000475482 NBPF1Q3BBV0 1214 aa22.47■■□□□ 1.19
CPSF3-203ENST00000475482 KRT28Q7Z3Y7 464 aa22.47■■□□□ 1.19
CPSF3-203ENST00000475482 L3MBTL2Q969R5 705 aa22.47■■□□□ 1.19
CPSF3-203ENST00000475482 C8orf37Q96NL8 207 aa22.47■■□□□ 1.19
CPSF3-203ENST00000475482 SIN3AQ96ST3 1273 aa22.47■■□□□ 1.19
CPSF3-203ENST00000475482 HIRIP3Q9BW71 556 aaPredicted RBP22.47■■□□□ 1.19
CPSF3-203ENST00000475482 PRR36Q9H6K5 1346 aa22.47■■□□□ 1.19
CPSF3-203ENST00000475482 EIF3AQ14152 1382 aaKnown RBP22.47■■□□□ 1.19
CPSF3-203ENST00000475482 ADAMTS2O95450 1211 aa22.46■■□□□ 1.19
CPSF3-203ENST00000475482 FNBP4Q8N3X1 1017 aaPredicted RBP22.45■■□□□ 1.18
CPSF3-203ENST00000475482 SBNO1A3KN83 1393 aa22.45■■□□□ 1.18
CPSF3-203ENST00000475482 CDK12Q9NYV4 1490 aaPredicted RBP22.45■■□□□ 1.18
CPSF3-203ENST00000475482 RXRBP28702 533 aa22.43■■□□□ 1.18
CPSF3-203ENST00000475482 NGLY1Q96IV0 654 aa22.43■■□□□ 1.18
CPSF3-203ENST00000475482 TNS3Q68CZ2 1445 aa22.42■■□□□ 1.18
CPSF3-203ENST00000475482 PSME1Q06323 249 aa22.42■■□□□ 1.18
CPSF3-203ENST00000475482 TRPM3Q9HCF6 1732 aaPredicted RBP22.42■■□□□ 1.18
CPSF3-203ENST00000475482 PMFBP1Q8TBY8 1022 aa22.41■■□□□ 1.18
CPSF3-203ENST00000475482 ATP7BP35670 1465 aa22.41■■□□□ 1.18
CPSF3-203ENST00000475482 QTRT2Q9H974 415 aaKnown RBP22.4■■□□□ 1.18
CPSF3-203ENST00000475482 TRPM1Q7Z4N2 1603 aa22.39■■□□□ 1.18
CPSF3-203ENST00000475482 ITSN1Q15811 1721 aa22.39■■□□□ 1.17
CPSF3-203ENST00000475482 RBM6P78332 1123 aaKnown RBP22.38■■□□□ 1.17
CPSF3-203ENST00000475482 ALS2Q96Q42 1657 aa22.37■■□□□ 1.17
CPSF3-203ENST00000475482 BCL9LQ86UU0 1499 aa22.37■■□□□ 1.17
CPSF3-203ENST00000475482 ARHGEF10O15013 1369 aa22.37■■□□□ 1.17
CPSF3-203ENST00000475482 NEUROD1Q13562 356 aa22.36■■□□□ 1.17
CPSF3-203ENST00000475482 USP21Q9UK80 565 aa22.36■■□□□ 1.17
CPSF3-203ENST00000475482 ABCA3Q99758 1704 aa22.36■■□□□ 1.17
CPSF3-203ENST00000475482 TOPAZ1Q8N9V7 1692 aa22.36■■□□□ 1.17
CPSF3-203ENST00000475482 ATRNO75882 1429 aa22.35■■□□□ 1.17
CPSF3-203ENST00000475482 NUDT16Q96DE0 195 aaKnown RBP22.35■■□□□ 1.17
CPSF3-203ENST00000475482 CDK19Q9BWU1 502 aa22.35■■□□□ 1.17
CPSF3-203ENST00000475482 TRPC5Q9UL62 973 aaPredicted RBP22.34■■□□□ 1.17
CPSF3-203ENST00000475482 TNKS1BP1Q9C0C2 1729 aaKnown RBP22.34■■□□□ 1.17
CPSF3-203ENST00000475482 SLIT2O94813 1529 aa22.33■■□□□ 1.17
CPSF3-203ENST00000475482 GPRASP1Q5JY77 1395 aa22.33■■□□□ 1.17
CPSF3-203ENST00000475482 CENPJQ9HC77 1338 aaPredicted RBP22.32■■□□□ 1.16
CPSF3-203ENST00000475482 RGS12O14924 1447 aa22.32■■□□□ 1.16
CPSF3-203ENST00000475482 POLR3AO14802 1390 aaPredicted RBP22.31■■□□□ 1.16
CPSF3-203ENST00000475482 CCDC61Q9Y6R9 512 aa22.31■■□□□ 1.16
CPSF3-203ENST00000475482 QRICH2Q9H0J4 1663 aa22.3■■□□□ 1.16
CPSF3-203ENST00000475482 PLEKHG3A1L390 1219 aa22.3■■□□□ 1.16
CPSF3-203ENST00000475482 CABLES1Q8TDN4 633 aa22.3■■□□□ 1.16
CPSF3-203ENST00000475482 CRYBG1Q9Y4K1 1723 aa22.29■■□□□ 1.16
CPSF3-203ENST00000475482 NBPF8Q3BBV2 869 aa22.29■■□□□ 1.16
CPSF3-203ENST00000475482 NGDNQ8NEJ9 315 aaKnown RBP22.29■■□□□ 1.16
CPSF3-203ENST00000475482 NWD2Q9ULI1 1742 aa22.26■■□□□ 1.15
CPSF3-203ENST00000475482 LMOD2Q6P5Q4 547 aa22.26■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms