RNA–Protein interactions for RNA: ENST00000475375.1

VPS36-203, Transcript of vacuolar protein sorting 36 homolog, humanhuman

TSL 2

Gene VPS36, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS36-203ENST00000475375 SRCAPQ6ZRS2 3230 aa30.82■■■□□ 2.52
VPS36-203ENST00000475375 NPHP3Q7Z494 1330 aa30.8■■■□□ 2.52
VPS36-203ENST00000475375 FNBP4Q8N3X1 1017 aaPredicted RBP30.8■■■□□ 2.52
VPS36-203ENST00000475375 PPLO60437 1756 aa30.77■■■□□ 2.52
VPS36-203ENST00000475375 XPCQ01831 940 aaPredicted RBP30.77■■■□□ 2.52
VPS36-203ENST00000475375 ATRNO75882 1429 aa30.76■■■□□ 2.51
VPS36-203ENST00000475375 STK26Q9P289 416 aa30.76■■■□□ 2.51
VPS36-203ENST00000475375 COL22A1Q8NFW1 1626 aaPredicted RBP30.76■■■□□ 2.51
VPS36-203ENST00000475375 FOXO3O43524 673 aa30.75■■■□□ 2.51
VPS36-203ENST00000475375 CDC42BPGQ6DT37 1551 aa30.75■■■□□ 2.51
VPS36-203ENST00000475375 NUTM2FA1L443 756 aa30.74■■■□□ 2.51
VPS36-203ENST00000475375 FOXD1Q16676 465 aa30.73■■■□□ 2.51
VPS36-203ENST00000475375 MYOM2P54296 1465 aa30.73■■■□□ 2.51
VPS36-203ENST00000475375 RGL3Q3MIN7 710 aa30.71■■■□□ 2.51
VPS36-203ENST00000475375 ADGRF5Q8IZF2 1346 aa30.71■■■□□ 2.51
VPS36-203ENST00000475375 PXDNQ92626 1479 aa30.7■■■□□ 2.51
VPS36-203ENST00000475375 LRPPRCP42704 1394 aaKnown RBP30.69■■■□□ 2.5
VPS36-203ENST00000475375 WAPLQ7Z5K2 1190 aa30.69■■■□□ 2.5
VPS36-203ENST00000475375 EP400Q96L91 3159 aa30.68■■■□□ 2.5
VPS36-203ENST00000475375 ZRANB1Q9UGI0 708 aa30.67■■■□□ 2.5
VPS36-203ENST00000475375 CCDC144AA2RUR9 1427 aa30.66■■■□□ 2.5
VPS36-203ENST00000475375 BCL9LQ86UU0 1499 aa30.66■■■□□ 2.5
VPS36-203ENST00000475375 GJD4Q96KN9 370 aaPredicted RBP30.63■■■□□ 2.49
VPS36-203ENST00000475375 TMEM132EQ6IEE7 984 aa30.62■■■□□ 2.49
VPS36-203ENST00000475375 ANKRD30BQ9BXX2 1392 aa30.61■■■□□ 2.49
VPS36-203ENST00000475375 TECPR2O15040 1411 aa30.61■■■□□ 2.49
VPS36-203ENST00000475375 MARF1Q9Y4F3 1742 aaKnown RBP30.61■■■□□ 2.49
VPS36-203ENST00000475375 CCDC125Q86Z20 511 aa30.6■■■□□ 2.49
VPS36-203ENST00000475375 PLEKHH1Q9ULM0 1364 aa30.6■■■□□ 2.49
VPS36-203ENST00000475375 ABCC11Q96J66 1382 aa30.58■■■□□ 2.49
VPS36-203ENST00000475375 SPATA31E1Q6ZUB1 1445 aa30.56■■■□□ 2.48
VPS36-203ENST00000475375 SPATA31A3Q5VYP0 1347 aa30.56■■■□□ 2.48
VPS36-203ENST00000475375 UNC5CLQ8IV45 518 aa30.56■■■□□ 2.48
VPS36-203ENST00000475375 HAP1P54257 671 aaPredicted RBP30.55■■■□□ 2.48
VPS36-203ENST00000475375 KRT28Q7Z3Y7 464 aa30.54■■■□□ 2.48
VPS36-203ENST00000475375 MPHOSPH9Q99550 1183 aa30.53■■■□□ 2.48
VPS36-203ENST00000475375 PLEKHG5O94827 1062 aa30.52■■■□□ 2.48
VPS36-203ENST00000475375 PIK3C2GO75747 1445 aa30.52■■■□□ 2.48
VPS36-203ENST00000475375 YTHDC2Q9H6S0 1430 aaKnown RBP30.52■■■□□ 2.48
VPS36-203ENST00000475375 KNDC1Q76NI1 1749 aa30.52■■■□□ 2.48
VPS36-203ENST00000475375 FMN2Q9NZ56 1722 aa30.52■■■□□ 2.48
VPS36-203ENST00000475375 RALGAPBQ86X10 1494 aa30.51■■■□□ 2.48
VPS36-203ENST00000475375 KIF1AQ12756 1690 aa30.51■■■□□ 2.47
VPS36-203ENST00000475375 IFT172Q9UG01 1749 aa30.5■■■□□ 2.47
VPS36-203ENST00000475375 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.5■■■□□ 2.47
VPS36-203ENST00000475375 SLIT2O94813 1529 aa30.49■■■□□ 2.47
VPS36-203ENST00000475375 PSME1Q06323 249 aa30.47■■■□□ 2.47
VPS36-203ENST00000475375 PHF8Q9UPP1 1060 aa30.47■■■□□ 2.47
VPS36-203ENST00000475375 GLI3P10071 1580 aa30.46■■■□□ 2.47
VPS36-203ENST00000475375 LMOD2Q6P5Q4 547 aa30.46■■■□□ 2.47
VPS36-203ENST00000475375 USP32Q8NFA0 1604 aa30.46■■■□□ 2.47
VPS36-203ENST00000475375 CABLES1Q8TDN4 633 aa30.45■■■□□ 2.47
VPS36-203ENST00000475375 CCDC9Q9Y3X0 531 aaKnown RBP30.45■■■□□ 2.47
VPS36-203ENST00000475375 BLMP54132 1417 aaPredicted RBP30.45■■■□□ 2.46
VPS36-203ENST00000475375 TNS3Q68CZ2 1445 aa30.44■■■□□ 2.46
VPS36-203ENST00000475375 SF3B2Q13435 895 aaKnown RBP30.43■■■□□ 2.46
VPS36-203ENST00000475375 SAFB2Q14151 953 aaKnown RBP eCLIP30.43■■■□□ 2.46
VPS36-203ENST00000475375 SIRT1Q96EB6 747 aa30.43■■■□□ 2.46
VPS36-203ENST00000475375 SEPT12Q8IYM1 358 aa30.42■■■□□ 2.46
VPS36-203ENST00000475375 C14orf93Q9H972 538 aaKnown RBP30.41■■■□□ 2.46
VPS36-203ENST00000475375 DHX57Q6P158 1386 aaKnown RBP30.41■■■□□ 2.46
VPS36-203ENST00000475375 VPS72Q15906 364 aa30.39■■■□□ 2.46
VPS36-203ENST00000475375 CFAP70Q5T0N1 1121 aa30.39■■■□□ 2.46
VPS36-203ENST00000475375 DEFB132Q7Z7B7 95 aa30.38■■■□□ 2.45
VPS36-203ENST00000475375 PRAM1Q96QH2 718 aa30.38■■■□□ 2.45
VPS36-203ENST00000475375 RGPD8O14715 1765 aaPredicted RBP30.37■■■□□ 2.45
VPS36-203ENST00000475375 ARHGEF10O15013 1369 aa30.36■■■□□ 2.45
VPS36-203ENST00000475375 BRWD3Q6RI45 1802 aa30.36■■■□□ 2.45
VPS36-203ENST00000475375 A0A0G2JS52 829 aa30.35■■■□□ 2.45
VPS36-203ENST00000475375 MYT1Q01538 1121 aa30.35■■■□□ 2.45
VPS36-203ENST00000475375 POGKQ9P215 609 aa30.35■■■□□ 2.45
VPS36-203ENST00000475375 SBNO1A3KN83 1393 aa30.35■■■□□ 2.45
VPS36-203ENST00000475375 NRXN1Q9ULB1 1477 aa30.34■■■□□ 2.45
VPS36-203ENST00000475375 PMFBP1Q8TBY8 1022 aa30.34■■■□□ 2.45
VPS36-203ENST00000475375 PLCH1Q4KWH8 1693 aa30.33■■■□□ 2.45
VPS36-203ENST00000475375 KRT27Q7Z3Y8 459 aa30.32■■■□□ 2.44
VPS36-203ENST00000475375 FAM83GA6ND36 823 aa30.29■■■□□ 2.44
VPS36-203ENST00000475375 NWD2Q9ULI1 1742 aa30.29■■■□□ 2.44
VPS36-203ENST00000475375 ONECUT3O60422 494 aaPredicted RBP30.27■■■□□ 2.44
VPS36-203ENST00000475375 ABCA3Q99758 1704 aa30.27■■■□□ 2.44
VPS36-203ENST00000475375 ANKARQ7Z5J8 1434 aa30.26■■■□□ 2.43
VPS36-203ENST00000475375 ACIN1Q9UKV3 1341 aaKnown RBP30.24■■■□□ 2.43
VPS36-203ENST00000475375 HIRIP3Q9BW71 556 aaPredicted RBP30.24■■■□□ 2.43
VPS36-203ENST00000475375 FAM98CQ17RN3 349 aaKnown RBP30.23■■■□□ 2.43
VPS36-203ENST00000475375 DLC1Q96QB1 1528 aa30.22■■■□□ 2.43
VPS36-203ENST00000475375 BTG4Q9NY30 223 aa30.22■■■□□ 2.43
VPS36-203ENST00000475375 GPRASP1Q5JY77 1395 aa30.22■■■□□ 2.43
VPS36-203ENST00000475375 BAG6P46379 1132 aa30.21■■■□□ 2.43
VPS36-203ENST00000475375 TRAK1Q9UPV9 953 aa30.21■■■□□ 2.43
VPS36-203ENST00000475375 MINK1Q8N4C8 1332 aaPredicted RBP30.21■■■□□ 2.43
VPS36-203ENST00000475375 ADGRB2O60241 1585 aa30.18■■■□□ 2.42
VPS36-203ENST00000475375 EIF3AQ14152 1382 aaKnown RBP30.17■■■□□ 2.42
VPS36-203ENST00000475375 PSDA5PKW4 1024 aaPredicted RBP30.16■■■□□ 2.42
VPS36-203ENST00000475375 TRPM3Q9HCF6 1732 aaPredicted RBP30.14■■■□□ 2.42
VPS36-203ENST00000475375 PAK3O75914 559 aaPredicted RBP30.14■■■□□ 2.42
VPS36-203ENST00000475375 NGDNQ8NEJ9 315 aaKnown RBP30.14■■■□□ 2.42
VPS36-203ENST00000475375 KDM2AQ9Y2K7 1162 aa30.14■■■□□ 2.42
VPS36-203ENST00000475375 NRAPQ86VF7 1730 aa30.13■■■□□ 2.41
VPS36-203ENST00000475375 ADGRB1O14514 1584 aa30.13■■■□□ 2.41
VPS36-203ENST00000475375 PRR36Q9H6K5 1346 aa30.13■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms