RNA–Protein interactions for RNA: ENST00000475158.1

CDH23-211, Transcript of cadherin related 23, humanhuman

TSL 1 (best)

Gene CDH23, Length 4,114 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH23-211ENST00000475158 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.85□□□□□ -0.51
CDH23-211ENST00000475158 ERBINQ96RT1 1412 aa11.85□□□□□ -0.51
CDH23-211ENST00000475158 WAPLQ7Z5K2 1190 aa11.85□□□□□ -0.51
CDH23-211ENST00000475158 GPATCH3Q96I76 525 aa11.85□□□□□ -0.51
CDH23-211ENST00000475158 RBM10P98175 930 aaKnown RBP11.84□□□□□ -0.51
CDH23-211ENST00000475158 SYTL4Q96C24 671 aaPredicted RBP11.84□□□□□ -0.51
CDH23-211ENST00000475158 KIAA0586Q9BVV6 1533 aa11.84□□□□□ -0.51
CDH23-211ENST00000475158 STAC3Q96MF2 364 aa11.84□□□□□ -0.51
CDH23-211ENST00000475158 SUPT6HQ7KZ85 1726 aaKnown RBP11.84□□□□□ -0.51
CDH23-211ENST00000475158 FBLN1P23142 703 aa11.84□□□□□ -0.51
CDH23-211ENST00000475158 BACH2Q9BYV9 841 aa11.84□□□□□ -0.51
CDH23-211ENST00000475158 RRP9O43818 475 aaKnown RBP11.84□□□□□ -0.51
CDH23-211ENST00000475158 ADGRF5Q8IZF2 1346 aa11.83□□□□□ -0.52
CDH23-211ENST00000475158 PDE4CQ08493 712 aa11.83□□□□□ -0.52
CDH23-211ENST00000475158 TWISTNBQ3B726 338 aaPredicted RBP11.83□□□□□ -0.52
CDH23-211ENST00000475158 ABTB2Q8N961 1025 aa11.83□□□□□ -0.52
CDH23-211ENST00000475158 RBM33Q96EV2 1170 aaKnown RBP11.83□□□□□ -0.52
CDH23-211ENST00000475158 DIAPH3Q9NSV4 1193 aa11.83□□□□□ -0.52
CDH23-211ENST00000475158 NLRP2Q9NX02 1062 aa11.83□□□□□ -0.52
CDH23-211ENST00000475158 NCOA1Q15788 1441 aa11.83□□□□□ -0.52
CDH23-211ENST00000475158 DCTN1Q14203 1278 aa11.82□□□□□ -0.52
CDH23-211ENST00000475158 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.82□□□□□ -0.52
CDH23-211ENST00000475158 HECW1Q76N89 1606 aa11.82□□□□□ -0.52
CDH23-211ENST00000475158 WWC1Q8IX03 1113 aa11.82□□□□□ -0.52
CDH23-211ENST00000475158 URB2Q14146 1524 aaKnown RBP11.82□□□□□ -0.52
CDH23-211ENST00000475158 GTF2E1P29083 439 aaPredicted RBP11.81□□□□□ -0.52
CDH23-211ENST00000475158 MIS18AQ9NYP9 233 aa11.81□□□□□ -0.52
CDH23-211ENST00000475158 XPCQ01831 940 aaPredicted RBP11.81□□□□□ -0.52
CDH23-211ENST00000475158 IQGAP2Q13576 1575 aa11.81□□□□□ -0.52
CDH23-211ENST00000475158 TTC5Q8N0Z6 440 aa11.8□□□□□ -0.52
CDH23-211ENST00000475158 KIAA2012Q0VF49 1180 aa11.8□□□□□ -0.52
CDH23-211ENST00000475158 FBXO31Q5XUX0 539 aaPredicted RBP11.8□□□□□ -0.52
CDH23-211ENST00000475158 CHMP4AQ9BY43 222 aa11.8□□□□□ -0.52
CDH23-211ENST00000475158 CHMP5Q9NZZ3 219 aa11.8□□□□□ -0.52
CDH23-211ENST00000475158 FOSBP53539 338 aa11.8□□□□□ -0.52
CDH23-211ENST00000475158 PTPN23Q9H3S7 1636 aa11.8□□□□□ -0.52
CDH23-211ENST00000475158 CAMSAP2Q08AD1 1489 aa11.8□□□□□ -0.52
CDH23-211ENST00000475158 SMG6Q86US8 1419 aaKnown RBP11.8□□□□□ -0.52
CDH23-211ENST00000475158 REC8O95072 547 aa11.79□□□□□ -0.52
CDH23-211ENST00000475158 EVA1CP58658 441 aa11.79□□□□□ -0.52
CDH23-211ENST00000475158 NEXNQ0ZGT2 675 aa11.79□□□□□ -0.52
CDH23-211ENST00000475158 MAPK8IP2Q13387 824 aaPredicted RBP11.79□□□□□ -0.52
CDH23-211ENST00000475158 SLC4A2P04920 1241 aa11.79□□□□□ -0.52
CDH23-211ENST00000475158 CHAF1AQ13111 956 aaPredicted RBP11.79□□□□□ -0.52
CDH23-211ENST00000475158 DDX11L8A8MPP1 907 aa11.79□□□□□ -0.52
CDH23-211ENST00000475158 IFIT2P09913 472 aaKnown RBP11.79□□□□□ -0.52
CDH23-211ENST00000475158 ESCO1Q5FWF5 840 aa11.79□□□□□ -0.52
CDH23-211ENST00000475158 SYAP1Q96A49 352 aaPredicted RBP11.79□□□□□ -0.52
CDH23-211ENST00000475158 MAGI1Q96QZ7 1491 aaPredicted RBP11.79□□□□□ -0.52
CDH23-211ENST00000475158 PDE3AQ14432 1141 aa11.79□□□□□ -0.52
CDH23-211ENST00000475158 CREBRFQ8IUR6 639 aa11.79□□□□□ -0.52
CDH23-211ENST00000475158 ROCK1Q13464 1354 aa11.78□□□□□ -0.52
CDH23-211ENST00000475158 SURF6O75683 361 aaKnown RBP11.78□□□□□ -0.52
CDH23-211ENST00000475158 SLFN5Q08AF3 891 aa11.78□□□□□ -0.52
CDH23-211ENST00000475158 HDAC5Q9UQL6 1122 aa11.78□□□□□ -0.52
CDH23-211ENST00000475158 NSD3Q9BZ95 1437 aa11.78□□□□□ -0.52
CDH23-211ENST00000475158 NRDCO43847 1150 aa11.78□□□□□ -0.52
CDH23-211ENST00000475158 MCTP1Q6DN14 999 aa11.78□□□□□ -0.52
CDH23-211ENST00000475158 ATF7IPQ6VMQ6 1270 aa11.78□□□□□ -0.52
CDH23-211ENST00000475158 VPS37CA5D8V6 355 aaPredicted RBP11.77□□□□□ -0.52
CDH23-211ENST00000475158 GOLGA6L6A8MZA4 724 aa11.77□□□□□ -0.53
CDH23-211ENST00000475158 RAPGEF4Q8WZA2 1011 aa11.77□□□□□ -0.53
CDH23-211ENST00000475158 UBTFL1P0CB47 393 aaPredicted RBP11.77□□□□□ -0.53
CDH23-211ENST00000475158 IDI1Q13907 227 aa11.76□□□□□ -0.53
CDH23-211ENST00000475158 PLEKHH2Q8IVE3 1493 aa11.76□□□□□ -0.53
CDH23-211ENST00000475158 TMPOP42166 694 aaKnown RBP11.76□□□□□ -0.53
CDH23-211ENST00000475158 SF3A1Q15459 793 aaKnown RBP11.76□□□□□ -0.53
CDH23-211ENST00000475158 MAPKBP1O60336 1514 aa11.76□□□□□ -0.53
CDH23-211ENST00000475158 TMEM57Q8N5G2 664 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 RNF214Q8ND24 703 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 NEUROD6Q96NK8 337 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 SLC52A1Q9NWF4 448 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 R3HCC1Q9Y3T6 440 aaKnown RBP11.75□□□□□ -0.53
CDH23-211ENST00000475158 H3BQV1 296 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 G3BP1Q13283 466 aaKnown RBP eCLIP11.75□□□□□ -0.53
CDH23-211ENST00000475158 IFFO2Q5TF58 517 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 INTS3Q68E01 1043 aaKnown RBP11.75□□□□□ -0.53
CDH23-211ENST00000475158 RIC3Q7Z5B4 369 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 THOC2Q8NI27 1593 aaKnown RBP11.75□□□□□ -0.53
CDH23-211ENST00000475158 ZNF771Q7L3S4 317 aaPredicted RBP11.75□□□□□ -0.53
CDH23-211ENST00000475158 FAM184AQ8NB25 1140 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 DISP3Q9P2K9 1392 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 NEK4P51957 841 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 MVPQ14764 893 aaKnown RBP11.75□□□□□ -0.53
CDH23-211ENST00000475158 MCM10Q7L590 875 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 FBXW7Q969H0 707 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 EMILIN1Q9Y6C2 1016 aa11.75□□□□□ -0.53
CDH23-211ENST00000475158 FAM177BA6PVY3 158 aa11.74□□□□□ -0.53
CDH23-211ENST00000475158 MAP4K4O95819 1239 aaPredicted RBP11.74□□□□□ -0.53
CDH23-211ENST00000475158 NME9Q86XW9 330 aa11.74□□□□□ -0.53
CDH23-211ENST00000475158 SSH1Q8WYL5 1049 aa11.74□□□□□ -0.53
CDH23-211ENST00000475158 RPRD2Q5VT52 1461 aaKnown RBP11.74□□□□□ -0.53
CDH23-211ENST00000475158 CCDC141Q6ZP82 1450 aa11.74□□□□□ -0.53
CDH23-211ENST00000475158 GRIN2AQ12879 1464 aa11.74□□□□□ -0.53
CDH23-211ENST00000475158 APPP05067 770 aa11.74□□□□□ -0.53
CDH23-211ENST00000475158 ZKSCAN1P17029 563 aaPredicted RBP11.74□□□□□ -0.53
CDH23-211ENST00000475158 KDM4AO75164 1064 aa11.73□□□□□ -0.53
CDH23-211ENST00000475158 HDGFL1Q5TGJ6 251 aa11.73□□□□□ -0.53
CDH23-211ENST00000475158 BCL11BQ9C0K0 894 aaPredicted RBP11.73□□□□□ -0.53
CDH23-211ENST00000475158 CDC45O75419 566 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms