RNA–Protein interactions for RNA: ENST00000474916.1

CDK11A-214, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 3

Gene CDK11A, Length 752 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-214ENST00000474916 YTHDC2Q9H6S0 1430 aaKnown RBP24.27■■□□□ 1.48
CDK11A-214ENST00000474916 CFAP70Q5T0N1 1121 aa24.27■■□□□ 1.48
CDK11A-214ENST00000474916 ABCC11Q96J66 1382 aa24.27■■□□□ 1.48
CDK11A-214ENST00000474916 C14orf93Q9H972 538 aaKnown RBP24.26■■□□□ 1.47
CDK11A-214ENST00000474916 NUTM2BA6NNL0 878 aaPredicted RBP24.25■■□□□ 1.47
CDK11A-214ENST00000474916 NUTM2EB1AL46 878 aaPredicted RBP24.25■■□□□ 1.47
CDK11A-214ENST00000474916 NUTM2AQ8IVF1 878 aaPredicted RBP24.25■■□□□ 1.47
CDK11A-214ENST00000474916 PNPLA6Q8IY17 1366 aa24.24■■□□□ 1.47
CDK11A-214ENST00000474916 FMN2Q9NZ56 1722 aa24.23■■□□□ 1.47
CDK11A-214ENST00000474916 NUTM2FA1L443 756 aa24.22■■□□□ 1.47
CDK11A-214ENST00000474916 MEX3CQ5U5Q3 659 aaKnown RBP24.22■■□□□ 1.47
CDK11A-214ENST00000474916 RGPD8O14715 1765 aaPredicted RBP24.21■■□□□ 1.47
CDK11A-214ENST00000474916 HRCP23327 699 aa24.21■■□□□ 1.47
CDK11A-214ENST00000474916 LRRC59Q96AG4 307 aaKnown RBP24.21■■□□□ 1.47
CDK11A-214ENST00000474916 SOS2Q07890 1332 aaPredicted RBP24.2■■□□□ 1.46
CDK11A-214ENST00000474916 ADGRB1O14514 1584 aa24.19■■□□□ 1.46
CDK11A-214ENST00000474916 ESCO1Q5FWF5 840 aa24.17■■□□□ 1.46
CDK11A-214ENST00000474916 KDM2AQ9Y2K7 1162 aa24.17■■□□□ 1.46
CDK11A-214ENST00000474916 DHX57Q6P158 1386 aaKnown RBP24.16■■□□□ 1.46
CDK11A-214ENST00000474916 PXDNQ92626 1479 aa24.15■■□□□ 1.46
CDK11A-214ENST00000474916 XPCQ01831 940 aaPredicted RBP24.15■■□□□ 1.46
CDK11A-214ENST00000474916 SAFB2Q14151 953 aaKnown RBP eCLIP24.14■■□□□ 1.45
CDK11A-214ENST00000474916 DCAF11Q8TEB1 546 aa24.14■■□□□ 1.45
CDK11A-214ENST00000474916 COL22A1Q8NFW1 1626 aaPredicted RBP24.13■■□□□ 1.45
CDK11A-214ENST00000474916 FOXO3O43524 673 aa24.12■■□□□ 1.45
CDK11A-214ENST00000474916 SIRT1Q96EB6 747 aa24.12■■□□□ 1.45
CDK11A-214ENST00000474916 PRAM1Q96QH2 718 aa24.12■■□□□ 1.45
CDK11A-214ENST00000474916 AFF2P51816 1311 aa24.11■■□□□ 1.45
CDK11A-214ENST00000474916 DLC1Q96QB1 1528 aa24.11■■□□□ 1.45
CDK11A-214ENST00000474916 UPF1Q92900 1129 aaKnown RBP eCLIP24.1■■□□□ 1.45
CDK11A-214ENST00000474916 ADAMTS2O95450 1211 aa24.09■■□□□ 1.45
CDK11A-214ENST00000474916 ZNF772Q68DY9 489 aaPredicted RBP24.09■■□□□ 1.45
CDK11A-214ENST00000474916 C8orf37Q96NL8 207 aa24.09■■□□□ 1.45
CDK11A-214ENST00000474916 USP32Q8NFA0 1604 aa24.09■■□□□ 1.45
CDK11A-214ENST00000474916 NPHP3Q7Z494 1330 aa24.09■■□□□ 1.45
CDK11A-214ENST00000474916 KIF1AQ12756 1690 aa24.08■■□□□ 1.45
CDK11A-214ENST00000474916 TRAK1Q9UPV9 953 aa24.07■■□□□ 1.44
CDK11A-214ENST00000474916 ADGRB2O60241 1585 aa24.05■■□□□ 1.44
CDK11A-214ENST00000474916 ARHGEF28Q8N1W1 1705 aaKnown RBP24.04■■□□□ 1.44
CDK11A-214ENST00000474916 MARF1Q9Y4F3 1742 aaKnown RBP24.04■■□□□ 1.44
CDK11A-214ENST00000474916 SRCAPQ6ZRS2 3230 aa24.03■■□□□ 1.44
CDK11A-214ENST00000474916 POGKQ9P215 609 aa24.03■■□□□ 1.44
CDK11A-214ENST00000474916 HIRIP3Q9BW71 556 aaPredicted RBP24.02■■□□□ 1.44
CDK11A-214ENST00000474916 RXRBP28702 533 aa23.99■■□□□ 1.43
CDK11A-214ENST00000474916 NGLY1Q96IV0 654 aa23.99■■□□□ 1.43
CDK11A-214ENST00000474916 PHF8Q9UPP1 1060 aa23.99■■□□□ 1.43
CDK11A-214ENST00000474916 MINK1Q8N4C8 1332 aaPredicted RBP23.99■■□□□ 1.43
CDK11A-214ENST00000474916 KRT28Q7Z3Y7 464 aa23.97■■□□□ 1.43
CDK11A-214ENST00000474916 SPATA31A3Q5VYP0 1347 aa23.96■■□□□ 1.43
CDK11A-214ENST00000474916 PRR36Q9H6K5 1346 aa23.96■■□□□ 1.43
CDK11A-214ENST00000474916 QTRT2Q9H974 415 aaKnown RBP23.96■■□□□ 1.43
CDK11A-214ENST00000474916 KIAA1210Q9ULL0 1709 aa23.96■■□□□ 1.43
CDK11A-214ENST00000474916 RGS12O14924 1447 aa23.95■■□□□ 1.42
CDK11A-214ENST00000474916 PMFBP1Q8TBY8 1022 aa23.95■■□□□ 1.42
CDK11A-214ENST00000474916 STAC3Q96MF2 364 aa23.95■■□□□ 1.42
CDK11A-214ENST00000474916 ANKARQ7Z5J8 1434 aa23.94■■□□□ 1.42
CDK11A-214ENST00000474916 ABCA3Q99758 1704 aa23.94■■□□□ 1.42
CDK11A-214ENST00000474916 CDK12Q9NYV4 1490 aaPredicted RBP23.94■■□□□ 1.42
CDK11A-214ENST00000474916 TRPM3Q9HCF6 1732 aaPredicted RBP23.93■■□□□ 1.42
CDK11A-214ENST00000474916 TNS3Q68CZ2 1445 aa23.93■■□□□ 1.42
CDK11A-214ENST00000474916 NBPF1Q3BBV0 1214 aa23.92■■□□□ 1.42
CDK11A-214ENST00000474916 FNBP4Q8N3X1 1017 aaPredicted RBP23.92■■□□□ 1.42
CDK11A-214ENST00000474916 USP21Q9UK80 565 aa23.92■■□□□ 1.42
CDK11A-214ENST00000474916 TULP4Q9NRJ4 1543 aa23.92■■□□□ 1.42
CDK11A-214ENST00000474916 WASLO00401 505 aaPredicted RBP23.9■■□□□ 1.42
CDK11A-214ENST00000474916 PLEKHG5O94827 1062 aa23.9■■□□□ 1.42
CDK11A-214ENST00000474916 SIN3AQ96ST3 1273 aa23.9■■□□□ 1.42
CDK11A-214ENST00000474916 BCL9LQ86UU0 1499 aa23.89■■□□□ 1.42
CDK11A-214ENST00000474916 RBM6P78332 1123 aaKnown RBP23.89■■□□□ 1.41
CDK11A-214ENST00000474916 CABLES1Q8TDN4 633 aa23.89■■□□□ 1.41
CDK11A-214ENST00000474916 ATRNO75882 1429 aa23.89■■□□□ 1.41
CDK11A-214ENST00000474916 ALS2Q96Q42 1657 aa23.86■■□□□ 1.41
CDK11A-214ENST00000474916 SBNO1A3KN83 1393 aa23.86■■□□□ 1.41
CDK11A-214ENST00000474916 ATP7BP35670 1465 aa23.86■■□□□ 1.41
CDK11A-214ENST00000474916 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.85■■□□□ 1.41
CDK11A-214ENST00000474916 PSME1Q06323 249 aa23.85■■□□□ 1.41
CDK11A-214ENST00000474916 ITSN1Q15811 1721 aa23.84■■□□□ 1.41
CDK11A-214ENST00000474916 L3MBTL2Q969R5 705 aa23.84■■□□□ 1.41
CDK11A-214ENST00000474916 TRPC5Q9UL62 973 aaPredicted RBP23.84■■□□□ 1.41
CDK11A-214ENST00000474916 LMOD2Q6P5Q4 547 aa23.83■■□□□ 1.41
CDK11A-214ENST00000474916 SLIT2O94813 1529 aa23.83■■□□□ 1.41
CDK11A-214ENST00000474916 PLCH1Q4KWH8 1693 aa23.83■■□□□ 1.4
CDK11A-214ENST00000474916 TOPAZ1Q8N9V7 1692 aa23.83■■□□□ 1.4
CDK11A-214ENST00000474916 EP400Q96L91 3159 aa23.82■■□□□ 1.4
CDK11A-214ENST00000474916 EIF3AQ14152 1382 aaKnown RBP23.81■■□□□ 1.4
CDK11A-214ENST00000474916 CRYBG1Q9Y4K1 1723 aa23.81■■□□□ 1.4
CDK11A-214ENST00000474916 TRPM1Q7Z4N2 1603 aa23.8■■□□□ 1.4
CDK11A-214ENST00000474916 GLI3P10071 1580 aa23.79■■□□□ 1.4
CDK11A-214ENST00000474916 NEUROD1Q13562 356 aa23.79■■□□□ 1.4
CDK11A-214ENST00000474916 NUDT16Q96DE0 195 aaKnown RBP23.79■■□□□ 1.4
CDK11A-214ENST00000474916 CDK19Q9BWU1 502 aa23.79■■□□□ 1.4
CDK11A-214ENST00000474916 QRICH2Q9H0J4 1663 aa23.79■■□□□ 1.4
CDK11A-214ENST00000474916 ARHGEF10O15013 1369 aa23.78■■□□□ 1.4
CDK11A-214ENST00000474916 GPRASP1Q5JY77 1395 aa23.76■■□□□ 1.39
CDK11A-214ENST00000474916 HAP1P54257 671 aaPredicted RBP23.75■■□□□ 1.39
CDK11A-214ENST00000474916 UNC5CLQ8IV45 518 aa23.75■■□□□ 1.39
CDK11A-214ENST00000474916 NGDNQ8NEJ9 315 aaKnown RBP23.75■■□□□ 1.39
CDK11A-214ENST00000474916 NWD2Q9ULI1 1742 aa23.75■■□□□ 1.39
CDK11A-214ENST00000474916 NRAPQ86VF7 1730 aa23.74■■□□□ 1.39
CDK11A-214ENST00000474916 GJD4Q96KN9 370 aaPredicted RBP23.74■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms