RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 STK26Q9P289 416 aa23.39■■□□□ 1.33
SRRT-209ENST00000474896 USP21Q9UK80 565 aa23.38■■□□□ 1.33
SRRT-209ENST00000474896 RGS12O14924 1447 aa23.38■■□□□ 1.33
SRRT-209ENST00000474896 WAPLQ7Z5K2 1190 aa23.37■■□□□ 1.33
SRRT-209ENST00000474896 MPHOSPH9Q99550 1183 aa23.35■■□□□ 1.33
SRRT-209ENST00000474896 NPHP3Q7Z494 1330 aa23.34■■□□□ 1.33
SRRT-209ENST00000474896 CCDC144AA2RUR9 1427 aa23.34■■□□□ 1.33
SRRT-209ENST00000474896 FOXO3O43524 673 aa23.34■■□□□ 1.33
SRRT-209ENST00000474896 FNBP4Q8N3X1 1017 aaPredicted RBP23.34■■□□□ 1.33
SRRT-209ENST00000474896 TRPC5Q9UL62 973 aaPredicted RBP23.34■■□□□ 1.33
SRRT-209ENST00000474896 NUTM2FA1L443 756 aa23.33■■□□□ 1.33
SRRT-209ENST00000474896 XPCQ01831 940 aaPredicted RBP23.33■■□□□ 1.33
SRRT-209ENST00000474896 TMEM132EQ6IEE7 984 aa23.33■■□□□ 1.33
SRRT-209ENST00000474896 ANKRD30BQ9BXX2 1392 aa23.3■■□□□ 1.32
SRRT-209ENST00000474896 SPATA31E1Q6ZUB1 1445 aa23.3■■□□□ 1.32
SRRT-209ENST00000474896 LRPPRCP42704 1394 aaKnown RBP23.29■■□□□ 1.32
SRRT-209ENST00000474896 CDC42BPGQ6DT37 1551 aa23.28■■□□□ 1.32
SRRT-209ENST00000474896 ABCC11Q96J66 1382 aa23.27■■□□□ 1.32
SRRT-209ENST00000474896 COL22A1Q8NFW1 1626 aaPredicted RBP23.27■■□□□ 1.32
SRRT-209ENST00000474896 PLEKHH1Q9ULM0 1364 aa23.27■■□□□ 1.31
SRRT-209ENST00000474896 PXDNQ92626 1479 aa23.26■■□□□ 1.31
SRRT-209ENST00000474896 TECPR2O15040 1411 aa23.25■■□□□ 1.31
SRRT-209ENST00000474896 ATRNO75882 1429 aa23.25■■□□□ 1.31
SRRT-209ENST00000474896 ATAD2Q6PL18 1390 aa23.25■■□□□ 1.31
SRRT-209ENST00000474896 MYOM2P54296 1465 aa23.24■■□□□ 1.31
SRRT-209ENST00000474896 PIK3C2GO75747 1445 aa23.21■■□□□ 1.31
SRRT-209ENST00000474896 YTHDC2Q9H6S0 1430 aaKnown RBP23.21■■□□□ 1.31
SRRT-209ENST00000474896 BCL9LQ86UU0 1499 aa23.21■■□□□ 1.31
SRRT-209ENST00000474896 IFT172Q9UG01 1749 aa23.21■■□□□ 1.31
SRRT-209ENST00000474896 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
SRRT-209ENST00000474896 SIRT1Q96EB6 747 aa23.2■■□□□ 1.3
SRRT-209ENST00000474896 C14orf93Q9H972 538 aaKnown RBP23.2■■□□□ 1.3
SRRT-209ENST00000474896 SPATA31A3Q5VYP0 1347 aa23.19■■□□□ 1.3
SRRT-209ENST00000474896 GJD4Q96KN9 370 aaPredicted RBP23.19■■□□□ 1.3
SRRT-209ENST00000474896 CFAP70Q5T0N1 1121 aa23.18■■□□□ 1.3
SRRT-209ENST00000474896 KNDC1Q76NI1 1749 aa23.16■■□□□ 1.3
SRRT-209ENST00000474896 MARF1Q9Y4F3 1742 aaKnown RBP23.16■■□□□ 1.3
SRRT-209ENST00000474896 UNC5CLQ8IV45 518 aa23.15■■□□□ 1.3
SRRT-209ENST00000474896 FMN2Q9NZ56 1722 aa23.15■■□□□ 1.3
SRRT-209ENST00000474896 DHX57Q6P158 1386 aaKnown RBP23.14■■□□□ 1.3
SRRT-209ENST00000474896 ACIN1Q9UKV3 1341 aaKnown RBP23.14■■□□□ 1.3
SRRT-209ENST00000474896 PHF8Q9UPP1 1060 aa23.14■■□□□ 1.29
SRRT-209ENST00000474896 PSME1Q06323 249 aa23.13■■□□□ 1.29
SRRT-209ENST00000474896 SAFB2Q14151 953 aaKnown RBP eCLIP23.13■■□□□ 1.29
SRRT-209ENST00000474896 CCDC125Q86Z20 511 aa23.12■■□□□ 1.29
SRRT-209ENST00000474896 PLEKHG5O94827 1062 aa23.11■■□□□ 1.29
SRRT-209ENST00000474896 HAP1P54257 671 aaPredicted RBP23.11■■□□□ 1.29
SRRT-209ENST00000474896 PRAM1Q96QH2 718 aa23.11■■□□□ 1.29
SRRT-209ENST00000474896 KIF1AQ12756 1690 aa23.1■■□□□ 1.29
SRRT-209ENST00000474896 RGPD8O14715 1765 aaPredicted RBP23.1■■□□□ 1.29
SRRT-209ENST00000474896 CABLES1Q8TDN4 633 aa23.1■■□□□ 1.29
SRRT-209ENST00000474896 LMOD2Q6P5Q4 547 aa23.09■■□□□ 1.29
SRRT-209ENST00000474896 POGKQ9P215 609 aa23.09■■□□□ 1.29
SRRT-209ENST00000474896 ZRANB1Q9UGI0 708 aa23.09■■□□□ 1.29
SRRT-209ENST00000474896 SLIT2O94813 1529 aa23.08■■□□□ 1.29
SRRT-209ENST00000474896 NRXN1Q9ULB1 1477 aa23.08■■□□□ 1.29
SRRT-209ENST00000474896 RALGAPBQ86X10 1494 aa23.06■■□□□ 1.28
SRRT-209ENST00000474896 PMFBP1Q8TBY8 1022 aa23.06■■□□□ 1.28
SRRT-209ENST00000474896 TNS3Q68CZ2 1445 aa23.05■■□□□ 1.28
SRRT-209ENST00000474896 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.05■■□□□ 1.28
SRRT-209ENST00000474896 SBNO1A3KN83 1393 aa23.03■■□□□ 1.28
SRRT-209ENST00000474896 GLI3P10071 1580 aa23.03■■□□□ 1.28
SRRT-209ENST00000474896 USP32Q8NFA0 1604 aa23.03■■□□□ 1.28
SRRT-209ENST00000474896 VPS72Q15906 364 aa23.02■■□□□ 1.28
SRRT-209ENST00000474896 SEPT12Q8IYM1 358 aa23.02■■□□□ 1.28
SRRT-209ENST00000474896 TRAK1Q9UPV9 953 aa23.02■■□□□ 1.28
SRRT-209ENST00000474896 KDM2AQ9Y2K7 1162 aa23.02■■□□□ 1.28
SRRT-209ENST00000474896 CCDC9Q9Y3X0 531 aaKnown RBP23.02■■□□□ 1.28
SRRT-209ENST00000474896 HIRIP3Q9BW71 556 aaPredicted RBP23.01■■□□□ 1.27
SRRT-209ENST00000474896 RAB3GAP2Q9H2M9 1393 aa23.01■■□□□ 1.27
SRRT-209ENST00000474896 FAM83GA6ND36 823 aa23■■□□□ 1.27
SRRT-209ENST00000474896 ARHGEF10O15013 1369 aa23■■□□□ 1.27
SRRT-209ENST00000474896 EP400Q96L91 3159 aa22.99■■□□□ 1.27
SRRT-209ENST00000474896 DLC1Q96QB1 1528 aa22.98■■□□□ 1.27
SRRT-209ENST00000474896 ONECUT3O60422 494 aaPredicted RBP22.98■■□□□ 1.27
SRRT-209ENST00000474896 DCAF11Q8TEB1 546 aa22.97■■□□□ 1.27
SRRT-209ENST00000474896 MINK1Q8N4C8 1332 aaPredicted RBP22.97■■□□□ 1.27
SRRT-209ENST00000474896 BLMP54132 1417 aaPredicted RBP22.97■■□□□ 1.27
SRRT-209ENST00000474896 ANKARQ7Z5J8 1434 aa22.97■■□□□ 1.27
SRRT-209ENST00000474896 BRWD3Q6RI45 1802 aa22.96■■□□□ 1.27
SRRT-209ENST00000474896 SF3B2Q13435 895 aaKnown RBP22.95■■□□□ 1.26
SRRT-209ENST00000474896 DEFB132Q7Z7B7 95 aa22.95■■□□□ 1.26
SRRT-209ENST00000474896 KRT27Q7Z3Y8 459 aa22.94■■□□□ 1.26
SRRT-209ENST00000474896 ADGRB1O14514 1584 aa22.93■■□□□ 1.26
SRRT-209ENST00000474896 SRCAPQ6ZRS2 3230 aa22.93■■□□□ 1.26
SRRT-209ENST00000474896 GPRASP1Q5JY77 1395 aa22.92■■□□□ 1.26
SRRT-209ENST00000474896 PRR36Q9H6K5 1346 aa22.92■■□□□ 1.26
SRRT-209ENST00000474896 NWD2Q9ULI1 1742 aa22.92■■□□□ 1.26
SRRT-209ENST00000474896 WASLO00401 505 aaPredicted RBP22.92■■□□□ 1.26
SRRT-209ENST00000474896 BTG4Q9NY30 223 aa22.92■■□□□ 1.26
SRRT-209ENST00000474896 PLCH1Q4KWH8 1693 aa22.92■■□□□ 1.26
SRRT-209ENST00000474896 ADGRB2O60241 1585 aa22.9■■□□□ 1.26
SRRT-209ENST00000474896 A0A0G2JS52 829 aa22.9■■□□□ 1.26
SRRT-209ENST00000474896 MYT1Q01538 1121 aa22.9■■□□□ 1.26
SRRT-209ENST00000474896 NGDNQ8NEJ9 315 aaKnown RBP22.9■■□□□ 1.26
SRRT-209ENST00000474896 ABCA3Q99758 1704 aa22.9■■□□□ 1.26
SRRT-209ENST00000474896 FAM98CQ17RN3 349 aaKnown RBP22.89■■□□□ 1.25
SRRT-209ENST00000474896 STAC3Q96MF2 364 aa22.89■■□□□ 1.25
SRRT-209ENST00000474896 EIF3AQ14152 1382 aaKnown RBP22.89■■□□□ 1.25
SRRT-209ENST00000474896 PAK3O75914 559 aaPredicted RBP22.88■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms