RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 RGPD8O14715 1765 aaPredicted RBP21.08■□□□□ 0.97
CCDC78-209ENST00000474647 RPGRIP1LQ68CZ1 1315 aa21.07■□□□□ 0.96
CCDC78-209ENST00000474647 EP400Q96L91 3159 aa21.07■□□□□ 0.96
CCDC78-209ENST00000474647 SOS2Q07890 1332 aaPredicted RBP21.06■□□□□ 0.96
CCDC78-209ENST00000474647 FMN2Q9NZ56 1722 aa21.06■□□□□ 0.96
CCDC78-209ENST00000474647 FOXD1Q16676 465 aa21.03■□□□□ 0.96
CCDC78-209ENST00000474647 USP21Q9UK80 565 aa21.03■□□□□ 0.96
CCDC78-209ENST00000474647 KIF1AQ12756 1690 aa21.02■□□□□ 0.96
CCDC78-209ENST00000474647 PXDNQ92626 1479 aa21.02■□□□□ 0.96
CCDC78-209ENST00000474647 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.02■□□□□ 0.96
CCDC78-209ENST00000474647 CCDC144AA2RUR9 1427 aa21.02■□□□□ 0.96
CCDC78-209ENST00000474647 ESCO1Q5FWF5 840 aa21.01■□□□□ 0.95
CCDC78-209ENST00000474647 NPHP3Q7Z494 1330 aa21■□□□□ 0.95
CCDC78-209ENST00000474647 MYOM2P54296 1465 aa21■□□□□ 0.95
CCDC78-209ENST00000474647 ATAD2Q6PL18 1390 aa20.99■□□□□ 0.95
CCDC78-209ENST00000474647 STK26Q9P289 416 aa20.99■□□□□ 0.95
CCDC78-209ENST00000474647 TRPC5Q9UL62 973 aaPredicted RBP20.99■□□□□ 0.95
CCDC78-209ENST00000474647 ADGRF5Q8IZF2 1346 aa20.99■□□□□ 0.95
CCDC78-209ENST00000474647 XPCQ01831 940 aaPredicted RBP20.98■□□□□ 0.95
CCDC78-209ENST00000474647 RGL3Q3MIN7 710 aa20.98■□□□□ 0.95
CCDC78-209ENST00000474647 BRWD3Q6RI45 1802 aa20.97■□□□□ 0.95
CCDC78-209ENST00000474647 ATRNO75882 1429 aa20.97■□□□□ 0.95
CCDC78-209ENST00000474647 NUTM2FA1L443 756 aa20.97■□□□□ 0.95
CCDC78-209ENST00000474647 TECPR2O15040 1411 aa20.95■□□□□ 0.95
CCDC78-209ENST00000474647 SPATA31E1Q6ZUB1 1445 aa20.95■□□□□ 0.95
CCDC78-209ENST00000474647 ABCA3Q99758 1704 aa20.95■□□□□ 0.94
CCDC78-209ENST00000474647 FOXO3O43524 673 aa20.94■□□□□ 0.94
CCDC78-209ENST00000474647 WAPLQ7Z5K2 1190 aa20.94■□□□□ 0.94
CCDC78-209ENST00000474647 FNBP4Q8N3X1 1017 aaPredicted RBP20.94■□□□□ 0.94
CCDC78-209ENST00000474647 SRCAPQ6ZRS2 3230 aa20.93■□□□□ 0.94
CCDC78-209ENST00000474647 USP32Q8NFA0 1604 aa20.93■□□□□ 0.94
CCDC78-209ENST00000474647 PLCH1Q4KWH8 1693 aa20.93■□□□□ 0.94
CCDC78-209ENST00000474647 LRPPRCP42704 1394 aaKnown RBP20.93■□□□□ 0.94
CCDC78-209ENST00000474647 ANKRD30BQ9BXX2 1392 aa20.93■□□□□ 0.94
CCDC78-209ENST00000474647 PLEKHH1Q9ULM0 1364 aa20.93■□□□□ 0.94
CCDC78-209ENST00000474647 PIK3C2GO75747 1445 aa20.93■□□□□ 0.94
CCDC78-209ENST00000474647 BCL9LQ86UU0 1499 aa20.92■□□□□ 0.94
CCDC78-209ENST00000474647 TMEM132EQ6IEE7 984 aa20.91■□□□□ 0.94
CCDC78-209ENST00000474647 YTHDC2Q9H6S0 1430 aaKnown RBP20.89■□□□□ 0.94
CCDC78-209ENST00000474647 GLI3P10071 1580 aa20.89■□□□□ 0.93
CCDC78-209ENST00000474647 ABCC11Q96J66 1382 aa20.88■□□□□ 0.93
CCDC78-209ENST00000474647 MPHOSPH9Q99550 1183 aa20.88■□□□□ 0.93
CCDC78-209ENST00000474647 NWD2Q9ULI1 1742 aa20.87■□□□□ 0.93
CCDC78-209ENST00000474647 RALGAPBQ86X10 1494 aa20.83■□□□□ 0.93
CCDC78-209ENST00000474647 GJD4Q96KN9 370 aaPredicted RBP20.83■□□□□ 0.93
CCDC78-209ENST00000474647 SLIT2O94813 1529 aa20.83■□□□□ 0.92
CCDC78-209ENST00000474647 SPATA31A3Q5VYP0 1347 aa20.82■□□□□ 0.92
CCDC78-209ENST00000474647 TNS3Q68CZ2 1445 aa20.82■□□□□ 0.92
CCDC78-209ENST00000474647 PLEKHG5O94827 1062 aa20.82■□□□□ 0.92
CCDC78-209ENST00000474647 HAP1P54257 671 aaPredicted RBP20.82■□□□□ 0.92
CCDC78-209ENST00000474647 KRT28Q7Z3Y7 464 aa20.81■□□□□ 0.92
CCDC78-209ENST00000474647 TRPM3Q9HCF6 1732 aaPredicted RBP20.79■□□□□ 0.92
CCDC78-209ENST00000474647 UNC5CLQ8IV45 518 aa20.79■□□□□ 0.92
CCDC78-209ENST00000474647 ZRANB1Q9UGI0 708 aa20.79■□□□□ 0.92
CCDC78-209ENST00000474647 NRXN1Q9ULB1 1477 aa20.79■□□□□ 0.92
CCDC78-209ENST00000474647 NRAPQ86VF7 1730 aa20.78■□□□□ 0.92
CCDC78-209ENST00000474647 ADGRB2O60241 1585 aa20.78■□□□□ 0.92
CCDC78-209ENST00000474647 DHX57Q6P158 1386 aaKnown RBP20.78■□□□□ 0.92
CCDC78-209ENST00000474647 SAFB2Q14151 953 aaKnown RBP eCLIP20.78■□□□□ 0.92
CCDC78-209ENST00000474647 PHF8Q9UPP1 1060 aa20.77■□□□□ 0.92
CCDC78-209ENST00000474647 CFAP70Q5T0N1 1121 aa20.76■□□□□ 0.91
CCDC78-209ENST00000474647 LMOD2Q6P5Q4 547 aa20.76■□□□□ 0.91
CCDC78-209ENST00000474647 CCDC125Q86Z20 511 aa20.76■□□□□ 0.91
CCDC78-209ENST00000474647 C14orf93Q9H972 538 aaKnown RBP20.76■□□□□ 0.91
CCDC78-209ENST00000474647 DLC1Q96QB1 1528 aa20.75■□□□□ 0.91
CCDC78-209ENST00000474647 ALS2Q96Q42 1657 aa20.75■□□□□ 0.91
CCDC78-209ENST00000474647 PSME1Q06323 249 aa20.75■□□□□ 0.91
CCDC78-209ENST00000474647 CABLES1Q8TDN4 633 aa20.75■□□□□ 0.91
CCDC78-209ENST00000474647 ITSN1Q15811 1721 aa20.75■□□□□ 0.91
CCDC78-209ENST00000474647 PRAM1Q96QH2 718 aa20.74■□□□□ 0.91
CCDC78-209ENST00000474647 BLMP54132 1417 aaPredicted RBP20.73■□□□□ 0.91
CCDC78-209ENST00000474647 SIRT1Q96EB6 747 aa20.73■□□□□ 0.91
CCDC78-209ENST00000474647 CCDC9Q9Y3X0 531 aaKnown RBP20.73■□□□□ 0.91
CCDC78-209ENST00000474647 CRYBG1Q9Y4K1 1723 aa20.73■□□□□ 0.91
CCDC78-209ENST00000474647 COL14A1Q05707 1796 aaKnown RBP20.72■□□□□ 0.91
CCDC78-209ENST00000474647 SBNO1A3KN83 1393 aa20.72■□□□□ 0.91
CCDC78-209ENST00000474647 ARHGEF10O15013 1369 aa20.72■□□□□ 0.91
CCDC78-209ENST00000474647 POGKQ9P215 609 aa20.71■□□□□ 0.91
CCDC78-209ENST00000474647 ARHGEF28Q8N1W1 1705 aaKnown RBP20.7■□□□□ 0.9
CCDC78-209ENST00000474647 PMFBP1Q8TBY8 1022 aa20.7■□□□□ 0.9
CCDC78-209ENST00000474647 ADGRB1O14514 1584 aa20.7■□□□□ 0.9
CCDC78-209ENST00000474647 ANKARQ7Z5J8 1434 aa20.7■□□□□ 0.9
CCDC78-209ENST00000474647 RGPD1P0DJD0 1748 aa20.68■□□□□ 0.9
CCDC78-209ENST00000474647 SEPT12Q8IYM1 358 aa20.68■□□□□ 0.9
CCDC78-209ENST00000474647 ACIN1Q9UKV3 1341 aaKnown RBP20.68■□□□□ 0.9
CCDC78-209ENST00000474647 A0A0G2JS52 829 aa20.67■□□□□ 0.9
CCDC78-209ENST00000474647 MYT1Q01538 1121 aa20.67■□□□□ 0.9
CCDC78-209ENST00000474647 SF3B2Q13435 895 aaKnown RBP20.67■□□□□ 0.9
CCDC78-209ENST00000474647 VPS72Q15906 364 aa20.67■□□□□ 0.9
CCDC78-209ENST00000474647 HIRIP3Q9BW71 556 aaPredicted RBP20.66■□□□□ 0.9
CCDC78-209ENST00000474647 RAB3GAP2Q9H2M9 1393 aa20.66■□□□□ 0.9
CCDC78-209ENST00000474647 TULP4Q9NRJ4 1543 aa20.66■□□□□ 0.9
CCDC78-209ENST00000474647 DEFB132Q7Z7B7 95 aa20.65■□□□□ 0.9
CCDC78-209ENST00000474647 TRAK1Q9UPV9 953 aa20.65■□□□□ 0.9
CCDC78-209ENST00000474647 PHRF1Q9P1Y6 1649 aaKnown RBP20.64■□□□□ 0.9
CCDC78-209ENST00000474647 MINK1Q8N4C8 1332 aaPredicted RBP20.63■□□□□ 0.89
CCDC78-209ENST00000474647 EIF3AQ14152 1382 aaKnown RBP20.62■□□□□ 0.89
CCDC78-209ENST00000474647 GPRASP1Q5JY77 1395 aa20.62■□□□□ 0.89
CCDC78-209ENST00000474647 KRT27Q7Z3Y8 459 aa20.62■□□□□ 0.89
CCDC78-209ENST00000474647 LRP5O75197 1615 aa20.62■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms