RNA–Protein interactions for RNA: ENST00000474381.1

HLA-B-252, Transcript of major histocompatibility complex, class I, B, humanhuman

Gene HLA-B, Length 1,139 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-252ENST00000474381 COL16A1Q07092 1604 aaPredicted RBP29.24■■■□□ 2.27
HLA-B-252ENST00000474381 JCADQ9P266 1359 aa29.23■■■□□ 2.27
HLA-B-252ENST00000474381 PRAM1Q96QH2 718 aa29.21■■■□□ 2.27
HLA-B-252ENST00000474381 SIN3AQ96ST3 1273 aa29.21■■■□□ 2.27
HLA-B-252ENST00000474381 L3MBTL2Q969R5 705 aa29.18■■■□□ 2.26
HLA-B-252ENST00000474381 POGKQ9P215 609 aa29.17■■■□□ 2.26
HLA-B-252ENST00000474381 TRAK1Q9UPV9 953 aa29.17■■■□□ 2.26
HLA-B-252ENST00000474381 NHSL1Q5SYE7 1610 aa29.16■■■□□ 2.26
HLA-B-252ENST00000474381 KIAA1210Q9ULL0 1709 aa29.16■■■□□ 2.26
HLA-B-252ENST00000474381 ORAI2Q96SN7 254 aa29.15■■■□□ 2.26
HLA-B-252ENST00000474381 NEUROD1Q13562 356 aa29.14■■■□□ 2.26
HLA-B-252ENST00000474381 SAFB2Q14151 953 aaKnown RBP eCLIP29.11■■■□□ 2.25
HLA-B-252ENST00000474381 LRRC59Q96AG4 307 aaKnown RBP29.11■■■□□ 2.25
HLA-B-252ENST00000474381 SPATA31A6Q5VVP1 1343 aa29.11■■■□□ 2.25
HLA-B-252ENST00000474381 ESCO1Q5FWF5 840 aa29.1■■■□□ 2.25
HLA-B-252ENST00000474381 FMN2Q9NZ56 1722 aa29.1■■■□□ 2.25
HLA-B-252ENST00000474381 ADGRB2O60241 1585 aa29.09■■■□□ 2.25
HLA-B-252ENST00000474381 PHF23Q9BUL5 403 aaPredicted RBP29.09■■■□□ 2.25
HLA-B-252ENST00000474381 SOS2Q07890 1332 aaPredicted RBP29.08■■■□□ 2.25
HLA-B-252ENST00000474381 SHPRHQ149N8 1683 aa29.07■■■□□ 2.24
HLA-B-252ENST00000474381 DDX17Q92841 729 aaKnown RBP29.07■■■□□ 2.24
HLA-B-252ENST00000474381 NPHP3Q7Z494 1330 aa29.06■■■□□ 2.24
HLA-B-252ENST00000474381 NUTM2FA1L443 756 aa29.05■■■□□ 2.24
HLA-B-252ENST00000474381 NBPF1Q3BBV0 1214 aa29.05■■■□□ 2.24
HLA-B-252ENST00000474381 ANKARQ7Z5J8 1434 aa29.03■■■□□ 2.24
HLA-B-252ENST00000474381 ARHGEF28Q8N1W1 1705 aaKnown RBP29.03■■■□□ 2.24
HLA-B-252ENST00000474381 EIF3AQ14152 1382 aaKnown RBP29.02■■■□□ 2.24
HLA-B-252ENST00000474381 MINK1Q8N4C8 1332 aaPredicted RBP29.01■■■□□ 2.23
HLA-B-252ENST00000474381 ILDR2Q71H61 639 aa29■■■□□ 2.23
HLA-B-252ENST00000474381 PNPLA6Q8IY17 1366 aa29■■■□□ 2.23
HLA-B-252ENST00000474381 HIRIP3Q9BW71 556 aaPredicted RBP28.99■■■□□ 2.23
HLA-B-252ENST00000474381 TONSLQ96HA7 1378 aa28.99■■■□□ 2.23
HLA-B-252ENST00000474381 KIF1AQ12756 1690 aa28.99■■■□□ 2.23
HLA-B-252ENST00000474381 WASLO00401 505 aaPredicted RBP28.98■■■□□ 2.23
HLA-B-252ENST00000474381 FOXO3O43524 673 aa28.98■■■□□ 2.23
HLA-B-252ENST00000474381 PXDNQ92626 1479 aa28.97■■■□□ 2.23
HLA-B-252ENST00000474381 LRP6O75581 1613 aa28.97■■■□□ 2.23
HLA-B-252ENST00000474381 PHF8Q9UPP1 1060 aa28.96■■■□□ 2.23
HLA-B-252ENST00000474381 TULP4Q9NRJ4 1543 aa28.95■■■□□ 2.23
HLA-B-252ENST00000474381 TRPM1Q7Z4N2 1603 aa28.95■■■□□ 2.23
HLA-B-252ENST00000474381 PCGF6Q9BYE7 350 aa28.93■■■□□ 2.22
HLA-B-252ENST00000474381 RGS17Q9UGC6 210 aaPredicted RBP28.93■■■□□ 2.22
HLA-B-252ENST00000474381 ROCK2O75116 1388 aaKnown RBP28.92■■■□□ 2.22
HLA-B-252ENST00000474381 USP32Q8NFA0 1604 aa28.91■■■□□ 2.22
HLA-B-252ENST00000474381 CENPJQ9HC77 1338 aaPredicted RBP28.91■■■□□ 2.22
HLA-B-252ENST00000474381 NBPF8Q3BBV2 869 aa28.9■■■□□ 2.22
HLA-B-252ENST00000474381 MEX3CQ5U5Q3 659 aaKnown RBP28.9■■■□□ 2.22
HLA-B-252ENST00000474381 PRR36Q9H6K5 1346 aa28.9■■■□□ 2.22
HLA-B-252ENST00000474381 GPRASP1Q5JY77 1395 aa28.89■■■□□ 2.22
HLA-B-252ENST00000474381 NUTM2BA6NNL0 878 aaPredicted RBP28.88■■■□□ 2.21
HLA-B-252ENST00000474381 NUTM2EB1AL46 878 aaPredicted RBP28.88■■■□□ 2.21
HLA-B-252ENST00000474381 KRT28Q7Z3Y7 464 aa28.88■■■□□ 2.21
HLA-B-252ENST00000474381 NUTM2AQ8IVF1 878 aaPredicted RBP28.88■■■□□ 2.21
HLA-B-252ENST00000474381 CLSPNQ9HAW4 1339 aa28.88■■■□□ 2.21
HLA-B-252ENST00000474381 XPCQ01831 940 aaPredicted RBP28.87■■■□□ 2.21
HLA-B-252ENST00000474381 PSME1Q06323 249 aa28.86■■■□□ 2.21
HLA-B-252ENST00000474381 COL22A1Q8NFW1 1626 aaPredicted RBP28.85■■■□□ 2.21
HLA-B-252ENST00000474381 CDK19Q9BWU1 502 aa28.85■■■□□ 2.21
HLA-B-252ENST00000474381 SPATA31A3Q5VYP0 1347 aa28.85■■■□□ 2.21
HLA-B-252ENST00000474381 RGPD8O14715 1765 aaPredicted RBP28.85■■■□□ 2.21
HLA-B-252ENST00000474381 ATP7BP35670 1465 aa28.85■■■□□ 2.21
HLA-B-252ENST00000474381 PMFBP1Q8TBY8 1022 aa28.83■■■□□ 2.21
HLA-B-252ENST00000474381 NUDT16Q96DE0 195 aaKnown RBP28.83■■■□□ 2.21
HLA-B-252ENST00000474381 SBNO1A3KN83 1393 aa28.83■■■□□ 2.21
HLA-B-252ENST00000474381 RALGAPBQ86X10 1494 aa28.82■■■□□ 2.2
HLA-B-252ENST00000474381 TNS3Q68CZ2 1445 aa28.8■■■□□ 2.2
HLA-B-252ENST00000474381 ZNF772Q68DY9 489 aaPredicted RBP28.79■■■□□ 2.2
HLA-B-252ENST00000474381 POTEAQ6S8J7 498 aa28.79■■■□□ 2.2
HLA-B-252ENST00000474381 CCDC61Q9Y6R9 512 aa28.78■■■□□ 2.2
HLA-B-252ENST00000474381 QRICH2Q9H0J4 1663 aa28.77■■■□□ 2.2
HLA-B-252ENST00000474381 SOCS7O14512 581 aa28.77■■■□□ 2.2
HLA-B-252ENST00000474381 ITSN1Q15811 1721 aa28.77■■■□□ 2.2
HLA-B-252ENST00000474381 NGDNQ8NEJ9 315 aaKnown RBP28.76■■■□□ 2.19
HLA-B-252ENST00000474381 CARD11Q9BXL7 1154 aa28.76■■■□□ 2.19
HLA-B-252ENST00000474381 TIMELESSQ9UNS1 1208 aa28.76■■■□□ 2.19
HLA-B-252ENST00000474381 ARHGEF10O15013 1369 aa28.75■■■□□ 2.19
HLA-B-252ENST00000474381 SRPK2P78362 688 aaKnown RBP28.74■■■□□ 2.19
HLA-B-252ENST00000474381 C8orf37Q96NL8 207 aa28.74■■■□□ 2.19
HLA-B-252ENST00000474381 AFF2P51816 1311 aa28.73■■■□□ 2.19
HLA-B-252ENST00000474381 ADAMTS2O95450 1211 aa28.73■■■□□ 2.19
HLA-B-252ENST00000474381 EVC2Q86UK5 1308 aa28.72■■■□□ 2.19
HLA-B-252ENST00000474381 PLEKHG3A1L390 1219 aa28.72■■■□□ 2.19
HLA-B-252ENST00000474381 POLR3AO14802 1390 aaPredicted RBP28.72■■■□□ 2.19
HLA-B-252ENST00000474381 SBNO2Q9Y2G9 1366 aa28.72■■■□□ 2.19
HLA-B-252ENST00000474381 TOPAZ1Q8N9V7 1692 aa28.71■■■□□ 2.19
HLA-B-252ENST00000474381 NGLY1Q96IV0 654 aa28.69■■■□□ 2.18
HLA-B-252ENST00000474381 TRPM3Q9HCF6 1732 aaPredicted RBP28.69■■■□□ 2.18
HLA-B-252ENST00000474381 CABP2Q9NPB3 220 aa28.68■■■□□ 2.18
HLA-B-252ENST00000474381 ACEP12821 1306 aa28.67■■■□□ 2.18
HLA-B-252ENST00000474381 LMOD2Q6P5Q4 547 aa28.66■■■□□ 2.18
HLA-B-252ENST00000474381 FNBP4Q8N3X1 1017 aaPredicted RBP28.66■■■□□ 2.18
HLA-B-252ENST00000474381 PPIP5K1Q6PFW1 1433 aa28.66■■■□□ 2.18
HLA-B-252ENST00000474381 ALS2Q96Q42 1657 aa28.62■■■□□ 2.17
HLA-B-252ENST00000474381 CCER1Q8TC90 406 aaPredicted RBP28.62■■■□□ 2.17
HLA-B-252ENST00000474381 HAP1P54257 671 aaPredicted RBP28.61■■■□□ 2.17
HLA-B-252ENST00000474381 PAK3O75914 559 aaPredicted RBP28.6■■■□□ 2.17
HLA-B-252ENST00000474381 BRD4O60885 1362 aaPredicted RBP28.6■■■□□ 2.17
HLA-B-252ENST00000474381 RXRBP28702 533 aa28.59■■■□□ 2.17
HLA-B-252ENST00000474381 CABLES1Q8TDN4 633 aa28.59■■■□□ 2.17
HLA-B-252ENST00000474381 USP21Q9UK80 565 aa28.59■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms