RNA–Protein interactions for RNA: ENST00000474116.5

CUL4A-208, Transcript of cullin 4A, humanhuman

TSL 2

Gene CUL4A, Length 866 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUL4A-208ENST00000474116 RPGRIP1LQ68CZ1 1315 aa26.43■■□□□ 1.82
CUL4A-208ENST00000474116 MYOM2P54296 1465 aa26.42■■□□□ 1.82
CUL4A-208ENST00000474116 BCL9LQ86UU0 1499 aa26.39■■□□□ 1.82
CUL4A-208ENST00000474116 PPLO60437 1756 aa26.38■■□□□ 1.81
CUL4A-208ENST00000474116 PXDNQ92626 1479 aa26.38■■□□□ 1.81
CUL4A-208ENST00000474116 NPHP3Q7Z494 1330 aa26.38■■□□□ 1.81
CUL4A-208ENST00000474116 EP400Q96L91 3159 aa26.38■■□□□ 1.81
CUL4A-208ENST00000474116 ESCO1Q5FWF5 840 aa26.37■■□□□ 1.81
CUL4A-208ENST00000474116 CDC42BPGQ6DT37 1551 aa26.37■■□□□ 1.81
CUL4A-208ENST00000474116 RRBP1Q9P2E9 1410 aaKnown RBP26.36■■□□□ 1.81
CUL4A-208ENST00000474116 MARF1Q9Y4F3 1742 aaKnown RBP26.35■■□□□ 1.81
CUL4A-208ENST00000474116 FOXO3O43524 673 aa26.33■■□□□ 1.81
CUL4A-208ENST00000474116 CCDC125Q86Z20 511 aa26.33■■□□□ 1.81
CUL4A-208ENST00000474116 ZRANB1Q9UGI0 708 aa26.33■■□□□ 1.81
CUL4A-208ENST00000474116 XPCQ01831 940 aaPredicted RBP26.31■■□□□ 1.8
CUL4A-208ENST00000474116 GJD4Q96KN9 370 aaPredicted RBP26.31■■□□□ 1.8
CUL4A-208ENST00000474116 FOXD1Q16676 465 aa26.3■■□□□ 1.8
CUL4A-208ENST00000474116 SLC4A1APQ9BWU0 796 aaKnown RBP26.3■■□□□ 1.8
CUL4A-208ENST00000474116 ADGRF5Q8IZF2 1346 aa26.28■■□□□ 1.8
CUL4A-208ENST00000474116 WAPLQ7Z5K2 1190 aa26.27■■□□□ 1.8
CUL4A-208ENST00000474116 LRPPRCP42704 1394 aaKnown RBP26.27■■□□□ 1.8
CUL4A-208ENST00000474116 TECPR2O15040 1411 aa26.27■■□□□ 1.8
CUL4A-208ENST00000474116 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.25■■□□□ 1.79
CUL4A-208ENST00000474116 NUTM2FA1L443 756 aa26.24■■□□□ 1.79
CUL4A-208ENST00000474116 STK26Q9P289 416 aa26.24■■□□□ 1.79
CUL4A-208ENST00000474116 UNC5CLQ8IV45 518 aa26.23■■□□□ 1.79
CUL4A-208ENST00000474116 SLIT2O94813 1529 aa26.23■■□□□ 1.79
CUL4A-208ENST00000474116 GLI3P10071 1580 aa26.22■■□□□ 1.79
CUL4A-208ENST00000474116 ABCC11Q96J66 1382 aa26.21■■□□□ 1.79
CUL4A-208ENST00000474116 PLEKHH1Q9ULM0 1364 aa26.21■■□□□ 1.79
CUL4A-208ENST00000474116 SPATA31A3Q5VYP0 1347 aa26.21■■□□□ 1.79
CUL4A-208ENST00000474116 RALGAPBQ86X10 1494 aa26.21■■□□□ 1.79
CUL4A-208ENST00000474116 SPATA31E1Q6ZUB1 1445 aa26.19■■□□□ 1.78
CUL4A-208ENST00000474116 FMN2Q9NZ56 1722 aa26.19■■□□□ 1.78
CUL4A-208ENST00000474116 TMEM132EQ6IEE7 984 aa26.18■■□□□ 1.78
CUL4A-208ENST00000474116 KNDC1Q76NI1 1749 aa26.18■■□□□ 1.78
CUL4A-208ENST00000474116 IFT172Q9UG01 1749 aa26.18■■□□□ 1.78
CUL4A-208ENST00000474116 BLMP54132 1417 aaPredicted RBP26.17■■□□□ 1.78
CUL4A-208ENST00000474116 RGL3Q3MIN7 710 aa26.17■■□□□ 1.78
CUL4A-208ENST00000474116 ANKRD30BQ9BXX2 1392 aa26.17■■□□□ 1.78
CUL4A-208ENST00000474116 KIF1AQ12756 1690 aa26.15■■□□□ 1.78
CUL4A-208ENST00000474116 CCDC144AA2RUR9 1427 aa26.15■■□□□ 1.78
CUL4A-208ENST00000474116 KRT28Q7Z3Y7 464 aa26.15■■□□□ 1.78
CUL4A-208ENST00000474116 USP32Q8NFA0 1604 aa26.14■■□□□ 1.78
CUL4A-208ENST00000474116 BRWD3Q6RI45 1802 aa26.14■■□□□ 1.78
CUL4A-208ENST00000474116 PIK3C2GO75747 1445 aa26.13■■□□□ 1.77
CUL4A-208ENST00000474116 SIRT1Q96EB6 747 aa26.12■■□□□ 1.77
CUL4A-208ENST00000474116 YTHDC2Q9H6S0 1430 aaKnown RBP26.12■■□□□ 1.77
CUL4A-208ENST00000474116 DEFB132Q7Z7B7 95 aa26.1■■□□□ 1.77
CUL4A-208ENST00000474116 ONECUT3O60422 494 aaPredicted RBP26.09■■□□□ 1.77
CUL4A-208ENST00000474116 VPS72Q15906 364 aa26.09■■□□□ 1.77
CUL4A-208ENST00000474116 SEPT12Q8IYM1 358 aa26.09■■□□□ 1.77
CUL4A-208ENST00000474116 RGPD8O14715 1765 aaPredicted RBP26.09■■□□□ 1.77
CUL4A-208ENST00000474116 TNS3Q68CZ2 1445 aa26.08■■□□□ 1.77
CUL4A-208ENST00000474116 CABLES1Q8TDN4 633 aa26.07■■□□□ 1.76
CUL4A-208ENST00000474116 PHF8Q9UPP1 1060 aa26.07■■□□□ 1.76
CUL4A-208ENST00000474116 PSME1Q06323 249 aa26.06■■□□□ 1.76
CUL4A-208ENST00000474116 MPHOSPH9Q99550 1183 aa26.06■■□□□ 1.76
CUL4A-208ENST00000474116 NWD2Q9ULI1 1742 aa26.05■■□□□ 1.76
CUL4A-208ENST00000474116 PLCH1Q4KWH8 1693 aa26.04■■□□□ 1.76
CUL4A-208ENST00000474116 C14orf93Q9H972 538 aaKnown RBP26.04■■□□□ 1.76
CUL4A-208ENST00000474116 SBNO1A3KN83 1393 aa26.04■■□□□ 1.76
CUL4A-208ENST00000474116 HAP1P54257 671 aaPredicted RBP26.03■■□□□ 1.76
CUL4A-208ENST00000474116 NRXN1Q9ULB1 1477 aa26.03■■□□□ 1.76
CUL4A-208ENST00000474116 SF3B2Q13435 895 aaKnown RBP26.02■■□□□ 1.76
CUL4A-208ENST00000474116 ABCA3Q99758 1704 aa26.02■■□□□ 1.76
CUL4A-208ENST00000474116 FAM83GA6ND36 823 aa26■■□□□ 1.75
CUL4A-208ENST00000474116 KRT27Q7Z3Y8 459 aa26■■□□□ 1.75
CUL4A-208ENST00000474116 ARHGEF10O15013 1369 aa25.98■■□□□ 1.75
CUL4A-208ENST00000474116 PLEKHG5O94827 1062 aa25.98■■□□□ 1.75
CUL4A-208ENST00000474116 CFAP70Q5T0N1 1121 aa25.98■■□□□ 1.75
CUL4A-208ENST00000474116 CCDC9Q9Y3X0 531 aaKnown RBP25.98■■□□□ 1.75
CUL4A-208ENST00000474116 DHX57Q6P158 1386 aaKnown RBP25.97■■□□□ 1.75
CUL4A-208ENST00000474116 LRP5O75197 1615 aa25.96■■□□□ 1.75
CUL4A-208ENST00000474116 LMOD2Q6P5Q4 547 aa25.96■■□□□ 1.75
CUL4A-208ENST00000474116 PRAM1Q96QH2 718 aa25.96■■□□□ 1.75
CUL4A-208ENST00000474116 SAFB2Q14151 953 aaKnown RBP eCLIP25.93■■□□□ 1.74
CUL4A-208ENST00000474116 PMFBP1Q8TBY8 1022 aa25.93■■□□□ 1.74
CUL4A-208ENST00000474116 NRAPQ86VF7 1730 aa25.93■■□□□ 1.74
CUL4A-208ENST00000474116 ANKARQ7Z5J8 1434 aa25.92■■□□□ 1.74
CUL4A-208ENST00000474116 DLC1Q96QB1 1528 aa25.9■■□□□ 1.74
CUL4A-208ENST00000474116 TRPM3Q9HCF6 1732 aaPredicted RBP25.9■■□□□ 1.74
CUL4A-208ENST00000474116 BAG6P46379 1132 aa25.89■■□□□ 1.74
CUL4A-208ENST00000474116 FAM98CQ17RN3 349 aaKnown RBP25.89■■□□□ 1.74
CUL4A-208ENST00000474116 BTG4Q9NY30 223 aa25.88■■□□□ 1.73
CUL4A-208ENST00000474116 ADGRB2O60241 1585 aa25.87■■□□□ 1.73
CUL4A-208ENST00000474116 PSDA5PKW4 1024 aaPredicted RBP25.87■■□□□ 1.73
CUL4A-208ENST00000474116 POGKQ9P215 609 aa25.87■■□□□ 1.73
CUL4A-208ENST00000474116 ALS2Q96Q42 1657 aa25.87■■□□□ 1.73
CUL4A-208ENST00000474116 HRCP23327 699 aa25.86■■□□□ 1.73
CUL4A-208ENST00000474116 COL14A1Q05707 1796 aaKnown RBP25.85■■□□□ 1.73
CUL4A-208ENST00000474116 A0A0G2JS52 829 aa25.85■■□□□ 1.73
CUL4A-208ENST00000474116 MYT1Q01538 1121 aa25.85■■□□□ 1.73
CUL4A-208ENST00000474116 ADGRB1O14514 1584 aa25.82■■□□□ 1.72
CUL4A-208ENST00000474116 EN1Q05925 392 aaPredicted RBP25.82■■□□□ 1.72
CUL4A-208ENST00000474116 SPATA31A5Q5VU36 1347 aa25.82■■□□□ 1.72
CUL4A-208ENST00000474116 SPATA31A7Q8IWB4 1347 aa25.82■■□□□ 1.72
CUL4A-208ENST00000474116 PRR36Q9H6K5 1346 aa25.82■■□□□ 1.72
CUL4A-208ENST00000474116 HIRIP3Q9BW71 556 aaPredicted RBP25.81■■□□□ 1.72
CUL4A-208ENST00000474116 ACIN1Q9UKV3 1341 aaKnown RBP25.81■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms