RNA–Protein interactions for RNA: ENST00000473643.1

SMG5-203, Transcript of SMG5, nonsense mediated mRNA decay factor, humanhuman

TSL 2

Gene SMG5, Length 541 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG5-203ENST00000473643 PHF23Q9BUL5 403 aaPredicted RBP12.97□□□□□ -0.33
SMG5-203ENST00000473643 RGS17Q9UGC6 210 aaPredicted RBP12.97□□□□□ -0.33
SMG5-203ENST00000473643 YTHDC2Q9H6S0 1430 aaKnown RBP12.96□□□□□ -0.33
SMG5-203ENST00000473643 IFT172Q9UG01 1749 aa12.96□□□□□ -0.33
SMG5-203ENST00000473643 C1orf167Q5SNV9 1468 aa12.96□□□□□ -0.34
SMG5-203ENST00000473643 AHDC1Q5TGY3 1603 aaPredicted RBP12.95□□□□□ -0.34
SMG5-203ENST00000473643 ORAI2Q96SN7 254 aa12.95□□□□□ -0.34
SMG5-203ENST00000473643 SPATA31A6Q5VVP1 1343 aa12.94□□□□□ -0.34
SMG5-203ENST00000473643 ASXL1Q8IXJ9 1541 aa12.94□□□□□ -0.34
SMG5-203ENST00000473643 LRRC59Q96AG4 307 aaKnown RBP12.94□□□□□ -0.34
SMG5-203ENST00000473643 COL16A1Q07092 1604 aaPredicted RBP12.94□□□□□ -0.34
SMG5-203ENST00000473643 PLEKHH1Q9ULM0 1364 aa12.94□□□□□ -0.34
SMG5-203ENST00000473643 DDX17Q92841 729 aaKnown RBP12.93□□□□□ -0.34
SMG5-203ENST00000473643 PHLPP1O60346 1717 aa12.93□□□□□ -0.34
SMG5-203ENST00000473643 GPRASP1Q5JY77 1395 aa12.93□□□□□ -0.34
SMG5-203ENST00000473643 NALCNQ8IZF0 1738 aa12.92□□□□□ -0.34
SMG5-203ENST00000473643 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
SMG5-203ENST00000473643 NBPF1Q3BBV0 1214 aa12.91□□□□□ -0.34
SMG5-203ENST00000473643 SOS2Q07890 1332 aaPredicted RBP12.9□□□□□ -0.34
SMG5-203ENST00000473643 ESCO1Q5FWF5 840 aa12.9□□□□□ -0.34
SMG5-203ENST00000473643 PRAM1Q96QH2 718 aa12.9□□□□□ -0.34
SMG5-203ENST00000473643 KIAA1210Q9ULL0 1709 aa12.88□□□□□ -0.35
SMG5-203ENST00000473643 POTEAQ6S8J7 498 aa12.88□□□□□ -0.35
SMG5-203ENST00000473643 TRAK1Q9UPV9 953 aa12.88□□□□□ -0.35
SMG5-203ENST00000473643 ROCK2O75116 1388 aaKnown RBP12.88□□□□□ -0.35
SMG5-203ENST00000473643 ADGRB1O14514 1584 aa12.88□□□□□ -0.35
SMG5-203ENST00000473643 CDC42BPGQ6DT37 1551 aa12.88□□□□□ -0.35
SMG5-203ENST00000473643 TRPM1Q7Z4N2 1603 aa12.88□□□□□ -0.35
SMG5-203ENST00000473643 CARD11Q9BXL7 1154 aa12.87□□□□□ -0.35
SMG5-203ENST00000473643 POGKQ9P215 609 aa12.87□□□□□ -0.35
SMG5-203ENST00000473643 NUTM2FA1L443 756 aa12.86□□□□□ -0.35
SMG5-203ENST00000473643 FOXO3O43524 673 aa12.86□□□□□ -0.35
SMG5-203ENST00000473643 SAFB2Q14151 953 aaKnown RBP eCLIP12.86□□□□□ -0.35
SMG5-203ENST00000473643 LRP6O75581 1613 aa12.86□□□□□ -0.35
SMG5-203ENST00000473643 LAMC1P11047 1609 aa12.86□□□□□ -0.35
SMG5-203ENST00000473643 NHSL1Q5SYE7 1610 aa12.86□□□□□ -0.35
SMG5-203ENST00000473643 DLC1Q96QB1 1528 aa12.86□□□□□ -0.35
SMG5-203ENST00000473643 NPHP3Q7Z494 1330 aa12.86□□□□□ -0.35
SMG5-203ENST00000473643 KNDC1Q76NI1 1749 aa12.85□□□□□ -0.35
SMG5-203ENST00000473643 PNPLA6Q8IY17 1366 aa12.85□□□□□ -0.35
SMG5-203ENST00000473643 NUTM2BA6NNL0 878 aaPredicted RBP12.85□□□□□ -0.35
SMG5-203ENST00000473643 NUTM2EB1AL46 878 aaPredicted RBP12.85□□□□□ -0.35
SMG5-203ENST00000473643 NUTM2AQ8IVF1 878 aaPredicted RBP12.85□□□□□ -0.35
SMG5-203ENST00000473643 MEX3CQ5U5Q3 659 aaKnown RBP12.84□□□□□ -0.35
SMG5-203ENST00000473643 SHPRHQ149N8 1683 aa12.83□□□□□ -0.35
SMG5-203ENST00000473643 ZNF772Q68DY9 489 aaPredicted RBP12.83□□□□□ -0.36
SMG5-203ENST00000473643 EIF4G2P78344 907 aaKnown RBP eCLIP12.82□□□□□ -0.36
SMG5-203ENST00000473643 PHF8Q9UPP1 1060 aa12.82□□□□□ -0.36
SMG5-203ENST00000473643 PXDNQ92626 1479 aa12.81□□□□□ -0.36
SMG5-203ENST00000473643 XPCQ01831 940 aaPredicted RBP12.81□□□□□ -0.36
SMG5-203ENST00000473643 USP47Q96K76 1375 aa12.81□□□□□ -0.36
SMG5-203ENST00000473643 WASLO00401 505 aaPredicted RBP12.8□□□□□ -0.36
SMG5-203ENST00000473643 KRT28Q7Z3Y7 464 aa12.8□□□□□ -0.36
SMG5-203ENST00000473643 HIRIP3Q9BW71 556 aaPredicted RBP12.8□□□□□ -0.36
SMG5-203ENST00000473643 MINK1Q8N4C8 1332 aaPredicted RBP12.8□□□□□ -0.36
SMG5-203ENST00000473643 HSPA5P11021 654 aaKnown RBP12.79□□□□□ -0.36
SMG5-203ENST00000473643 SPATA31A3Q5VYP0 1347 aa12.79□□□□□ -0.36
SMG5-203ENST00000473643 EIF3AQ14152 1382 aaKnown RBP12.79□□□□□ -0.36
SMG5-203ENST00000473643 ANKARQ7Z5J8 1434 aa12.79□□□□□ -0.36
SMG5-203ENST00000473643 ST20-MTHFSA0A0A6YYL1 179 aa12.78□□□□□ -0.36
SMG5-203ENST00000473643 SLC24A1O60721 1099 aa12.78□□□□□ -0.36
SMG5-203ENST00000473643 ADAMTS2O95450 1211 aa12.78□□□□□ -0.36
SMG5-203ENST00000473643 PSME1Q06323 249 aa12.78□□□□□ -0.36
SMG5-203ENST00000473643 C8orf37Q96NL8 207 aa12.78□□□□□ -0.36
SMG5-203ENST00000473643 FMN2Q9NZ56 1722 aa12.78□□□□□ -0.36
SMG5-203ENST00000473643 AFF2P51816 1311 aa12.78□□□□□ -0.36
SMG5-203ENST00000473643 FNBP4Q8N3X1 1017 aaPredicted RBP12.77□□□□□ -0.37
SMG5-203ENST00000473643 NGLY1Q96IV0 654 aa12.77□□□□□ -0.37
SMG5-203ENST00000473643 PRR36Q9H6K5 1346 aa12.77□□□□□ -0.37
SMG5-203ENST00000473643 RXRBP28702 533 aa12.76□□□□□ -0.37
SMG5-203ENST00000473643 PMFBP1Q8TBY8 1022 aa12.76□□□□□ -0.37
SMG5-203ENST00000473643 TESK2Q96S53 571 aa12.76□□□□□ -0.37
SMG5-203ENST00000473643 CENPJQ9HC77 1338 aaPredicted RBP12.76□□□□□ -0.37
SMG5-203ENST00000473643 SBNO2Q9Y2G9 1366 aa12.76□□□□□ -0.37
SMG5-203ENST00000473643 ADGRB2O60241 1585 aa12.76□□□□□ -0.37
SMG5-203ENST00000473643 NUDT16Q96DE0 195 aaKnown RBP12.75□□□□□ -0.37
SMG5-203ENST00000473643 CDK19Q9BWU1 502 aa12.75□□□□□ -0.37
SMG5-203ENST00000473643 SBNO1A3KN83 1393 aa12.74□□□□□ -0.37
SMG5-203ENST00000473643 QTRT2Q9H974 415 aaKnown RBP12.74□□□□□ -0.37
SMG5-203ENST00000473643 KIF1AQ12756 1690 aa12.73□□□□□ -0.37
SMG5-203ENST00000473643 COL22A1Q8NFW1 1626 aaPredicted RBP12.73□□□□□ -0.37
SMG5-203ENST00000473643 RBM6P78332 1123 aaKnown RBP12.72□□□□□ -0.37
SMG5-203ENST00000473643 USP21Q9UK80 565 aa12.72□□□□□ -0.37
SMG5-203ENST00000473643 CCDC61Q9Y6R9 512 aa12.72□□□□□ -0.37
SMG5-203ENST00000473643 USP32Q8NFA0 1604 aa12.72□□□□□ -0.37
SMG5-203ENST00000473643 TULP4Q9NRJ4 1543 aa12.72□□□□□ -0.37
SMG5-203ENST00000473643 PLEKHG3A1L390 1219 aa12.71□□□□□ -0.37
SMG5-203ENST00000473643 NGDNQ8NEJ9 315 aaKnown RBP12.71□□□□□ -0.37
SMG5-203ENST00000473643 PUS7Q96PZ0 661 aaKnown RBP12.71□□□□□ -0.37
SMG5-203ENST00000473643 TNS3Q68CZ2 1445 aa12.71□□□□□ -0.38
SMG5-203ENST00000473643 ZNF316A6NFI3 1004 aaPredicted RBP12.7□□□□□ -0.38
SMG5-203ENST00000473643 TMF1P82094 1093 aa12.7□□□□□ -0.38
SMG5-203ENST00000473643 CABLES1Q8TDN4 633 aa12.7□□□□□ -0.38
SMG5-203ENST00000473643 TRPC5Q9UL62 973 aaPredicted RBP12.7□□□□□ -0.38
SMG5-203ENST00000473643 ARHGEF28Q8N1W1 1705 aaKnown RBP12.7□□□□□ -0.38
SMG5-203ENST00000473643 ARHGEF10O15013 1369 aa12.69□□□□□ -0.38
SMG5-203ENST00000473643 RGPD8O14715 1765 aaPredicted RBP12.69□□□□□ -0.38
SMG5-203ENST00000473643 LMOD2Q6P5Q4 547 aa12.69□□□□□ -0.38
SMG5-203ENST00000473643 BCL9LQ86UU0 1499 aa12.69□□□□□ -0.38
SMG5-203ENST00000473643 CDK12Q9NYV4 1490 aaPredicted RBP12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms