RNA–Protein interactions for RNA: ENST00000473578.5

CAMTA1-208, Transcript of calmodulin binding transcription activator 1, human

TSL 1 (best) BASIC

Gene CAMTA1, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAMTA1-208	ENST00000473578	DHX57	Q6P158	1386 aa	Known RBP	32.42	■■■□□ 2.78
CAMTA1-208	ENST00000473578	DCAF11	Q8TEB1	546 aa		32.41	■■■□□ 2.78
CAMTA1-208	ENST00000473578	PLEKHH1	Q9ULM0	1364 aa		32.39	■■■□□ 2.78
CAMTA1-208	ENST00000473578	NHSL1	Q5SYE7	1610 aa		32.38	■■■□□ 2.77
CAMTA1-208	ENST00000473578	NUTM2B	A6NNL0	878 aa	Predicted RBP	32.38	■■■□□ 2.77
CAMTA1-208	ENST00000473578	NUTM2E	B1AL46	878 aa	Predicted RBP	32.38	■■■□□ 2.77
CAMTA1-208	ENST00000473578	NUTM2A	Q8IVF1	878 aa	Predicted RBP	32.38	■■■□□ 2.77
CAMTA1-208	ENST00000473578	ESCO1	Q5FWF5	840 aa		32.36	■■■□□ 2.77
CAMTA1-208	ENST00000473578	SIRT1	Q96EB6	747 aa		32.36	■■■□□ 2.77
CAMTA1-208	ENST00000473578	SHPRH	Q149N8	1683 aa		32.36	■■■□□ 2.77
CAMTA1-208	ENST00000473578	POTEA	Q6S8J7	498 aa		32.35	■■■□□ 2.77
CAMTA1-208	ENST00000473578	LRP6	O75581	1613 aa		32.35	■■■□□ 2.77
CAMTA1-208	ENST00000473578	LAMC1	P11047	1609 aa		32.35	■■■□□ 2.77
CAMTA1-208	ENST00000473578	CDC42BPG	Q6DT37	1551 aa		32.35	■■■□□ 2.77
CAMTA1-208	ENST00000473578	KNDC1	Q76NI1	1749 aa		32.34	■■■□□ 2.77
CAMTA1-208	ENST00000473578	NUTM2F	A1L443	756 aa		32.34	■■■□□ 2.77
CAMTA1-208	ENST00000473578	STAC3	Q96MF2	364 aa		32.34	■■■□□ 2.77
CAMTA1-208	ENST00000473578	SAFB2	Q14151	953 aa	Known RBP eCLIP	32.29	■■■□□ 2.76
CAMTA1-208	ENST00000473578	PRAM1	Q96QH2	718 aa		32.29	■■■□□ 2.76
CAMTA1-208	ENST00000473578	SOS2	Q07890	1332 aa	Predicted RBP	32.28	■■■□□ 2.76
CAMTA1-208	ENST00000473578	POGK	Q9P215	609 aa		32.28	■■■□□ 2.76
CAMTA1-208	ENST00000473578	PNPLA6	Q8IY17	1366 aa		32.28	■■■□□ 2.76
CAMTA1-208	ENST00000473578	NPHP3	Q7Z494	1330 aa		32.26	■■■□□ 2.75
CAMTA1-208	ENST00000473578	TRAK1	Q9UPV9	953 aa		32.25	■■■□□ 2.75
CAMTA1-208	ENST00000473578	FOXO3	O43524	673 aa		32.24	■■■□□ 2.75
CAMTA1-208	ENST00000473578	ZNF772	Q68DY9	489 aa	Predicted RBP	32.23	■■■□□ 2.75
CAMTA1-208	ENST00000473578	ADGRB1	O14514	1584 aa		32.2	■■■□□ 2.75
CAMTA1-208	ENST00000473578	XPC	Q01831	940 aa	Predicted RBP	32.19	■■■□□ 2.74
CAMTA1-208	ENST00000473578	DLC1	Q96QB1	1528 aa		32.19	■■■□□ 2.74
CAMTA1-208	ENST00000473578	ADRA2B	P18089	450 aa		32.18	■■■□□ 2.74
CAMTA1-208	ENST00000473578	C8orf37	Q96NL8	207 aa		32.16	■■■□□ 2.74
CAMTA1-208	ENST00000473578	FMN2	Q9NZ56	1722 aa		32.16	■■■□□ 2.74
CAMTA1-208	ENST00000473578	ADAMTS2	O95450	1211 aa		32.15	■■■□□ 2.74
CAMTA1-208	ENST00000473578	AFF2	P51816	1311 aa		32.14	■■■□□ 2.74
CAMTA1-208	ENST00000473578	HIRIP3	Q9BW71	556 aa	Predicted RBP	32.12	■■■□□ 2.73
CAMTA1-208	ENST00000473578	PXDN	Q92626	1479 aa		32.11	■■■□□ 2.73
CAMTA1-208	ENST00000473578	MINK1	Q8N4C8	1332 aa	Predicted RBP	32.11	■■■□□ 2.73
CAMTA1-208	ENST00000473578	PHF8	Q9UPP1	1060 aa		32.11	■■■□□ 2.73
CAMTA1-208	ENST00000473578	NGLY1	Q96IV0	654 aa		32.09	■■■□□ 2.73
CAMTA1-208	ENST00000473578	KRT28	Q7Z3Y7	464 aa		32.08	■■■□□ 2.73
CAMTA1-208	ENST00000473578	RXRB	P28702	533 aa		32.05	■■■□□ 2.72
CAMTA1-208	ENST00000473578	KIF1A	Q12756	1690 aa		32.05	■■■□□ 2.72
CAMTA1-208	ENST00000473578	PSME1	Q06323	249 aa		32.03	■■■□□ 2.72
CAMTA1-208	ENST00000473578	ANKAR	Q7Z5J8	1434 aa		32.02	■■■□□ 2.72
CAMTA1-208	ENST00000473578	PMFBP1	Q8TBY8	1022 aa		32.02	■■■□□ 2.72
CAMTA1-208	ENST00000473578	SIN3A	Q96ST3	1273 aa		32.02	■■■□□ 2.72
CAMTA1-208	ENST00000473578	ADGRB2	O60241	1585 aa		32.02	■■■□□ 2.72
CAMTA1-208	ENST00000473578	SPATA31A3	Q5VYP0	1347 aa		32.01	■■■□□ 2.72
CAMTA1-208	ENST00000473578	WASL	O00401	505 aa	Predicted RBP	32.01	■■■□□ 2.71
CAMTA1-208	ENST00000473578	EIF3A	Q14152	1382 aa	Known RBP	32.01	■■■□□ 2.71
CAMTA1-208	ENST00000473578	NEUROD1	Q13562	356 aa		32	■■■□□ 2.71
CAMTA1-208	ENST00000473578	QTRT2	Q9H974	415 aa	Known RBP	32	■■■□□ 2.71
CAMTA1-208	ENST00000473578	COL22A1	Q8NFW1	1626 aa	Predicted RBP	32	■■■□□ 2.71
CAMTA1-208	ENST00000473578	RGPD8	O14715	1765 aa	Predicted RBP	31.99	■■■□□ 2.71
CAMTA1-208	ENST00000473578	NBPF1	Q3BBV0	1214 aa		31.98	■■■□□ 2.71
CAMTA1-208	ENST00000473578	L3MBTL2	Q969R5	705 aa		31.98	■■■□□ 2.71
CAMTA1-208	ENST00000473578	USP21	Q9UK80	565 aa		31.96	■■■□□ 2.71
CAMTA1-208	ENST00000473578	LMOD2	Q6P5Q4	547 aa		31.95	■■■□□ 2.71
CAMTA1-208	ENST00000473578	PRR36	Q9H6K5	1346 aa		31.94	■■■□□ 2.7
CAMTA1-208	ENST00000473578	KIAA1210	Q9ULL0	1709 aa		31.93	■■■□□ 2.7
CAMTA1-208	ENST00000473578	USP32	Q8NFA0	1604 aa		31.93	■■■□□ 2.7
CAMTA1-208	ENST00000473578	ARHGEF28	Q8N1W1	1705 aa	Known RBP	31.92	■■■□□ 2.7
CAMTA1-208	ENST00000473578	TULP4	Q9NRJ4	1543 aa		31.92	■■■□□ 2.7
CAMTA1-208	ENST00000473578	RBM6	P78332	1123 aa	Known RBP	31.92	■■■□□ 2.7
CAMTA1-208	ENST00000473578	FNBP4	Q8N3X1	1017 aa	Predicted RBP	31.92	■■■□□ 2.7
CAMTA1-208	ENST00000473578	TNS3	Q68CZ2	1445 aa		31.92	■■■□□ 2.7
CAMTA1-208	ENST00000473578	PLEKHG5	O94827	1062 aa		31.91	■■■□□ 2.7
CAMTA1-208	ENST00000473578	HAP1	P54257	671 aa	Predicted RBP	31.91	■■■□□ 2.7
CAMTA1-208	ENST00000473578	SBNO1	A3KN83	1393 aa		31.91	■■■□□ 2.7
CAMTA1-208	ENST00000473578	TRIM26	Q12899	539 aa	Predicted RBP	31.89	■■■□□ 2.7
CAMTA1-208	ENST00000473578	GPRASP1	Q5JY77	1395 aa		31.89	■■■□□ 2.7
CAMTA1-208	ENST00000473578	NGDN	Q8NEJ9	315 aa	Known RBP	31.88	■■■□□ 2.69
CAMTA1-208	ENST00000473578	CDK19	Q9BWU1	502 aa		31.88	■■■□□ 2.69
CAMTA1-208	ENST00000473578	TRPC5	Q9UL62	973 aa	Predicted RBP	31.88	■■■□□ 2.69
CAMTA1-208	ENST00000473578	NUDT16	Q96DE0	195 aa	Known RBP	31.87	■■■□□ 2.69
CAMTA1-208	ENST00000473578	CDK12	Q9NYV4	1490 aa	Predicted RBP	31.86	■■■□□ 2.69
CAMTA1-208	ENST00000473578	ARHGEF10	O15013	1369 aa		31.86	■■■□□ 2.69
CAMTA1-208	ENST00000473578	CABLES1	Q8TDN4	633 aa		31.85	■■■□□ 2.69
CAMTA1-208	ENST00000473578	CENPJ	Q9HC77	1338 aa	Predicted RBP	31.82	■■■□□ 2.68
CAMTA1-208	ENST00000473578	ATP7B	P35670	1465 aa		31.79	■■■□□ 2.68
CAMTA1-208	ENST00000473578	PAK3	O75914	559 aa	Predicted RBP	31.79	■■■□□ 2.68
CAMTA1-208	ENST00000473578	BCL9L	Q86UU0	1499 aa		31.78	■■■□□ 2.68
CAMTA1-208	ENST00000473578	RGS12	O14924	1447 aa		31.77	■■■□□ 2.68
CAMTA1-208	ENST00000473578	CCDC61	Q9Y6R9	512 aa		31.77	■■■□□ 2.68
CAMTA1-208	ENST00000473578	ATRN	O75882	1429 aa		31.76	■■■□□ 2.68
CAMTA1-208	ENST00000473578	MARF1	Q9Y4F3	1742 aa	Known RBP	31.76	■■■□□ 2.67
CAMTA1-208	ENST00000473578	SRPK2	P78362	688 aa	Known RBP	31.76	■■■□□ 2.67
CAMTA1-208	ENST00000473578	ROCK2	O75116	1388 aa	Known RBP	31.74	■■■□□ 2.67
CAMTA1-208	ENST00000473578	UNC5CL	Q8IV45	518 aa		31.74	■■■□□ 2.67
CAMTA1-208	ENST00000473578	UPF1	Q92900	1129 aa	Known RBP eCLIP	31.73	■■■□□ 2.67
CAMTA1-208	ENST00000473578	ITSN1	Q15811	1721 aa		31.72	■■■□□ 2.67
CAMTA1-208	ENST00000473578	TRPM3	Q9HCF6	1732 aa	Predicted RBP	31.71	■■■□□ 2.67
CAMTA1-208	ENST00000473578	SLIT2	O94813	1529 aa		31.7	■■■□□ 2.67
CAMTA1-208	ENST00000473578	GJD4	Q96KN9	370 aa	Predicted RBP	31.7	■■■□□ 2.67
CAMTA1-208	ENST00000473578	ACE	P12821	1306 aa		31.7	■■■□□ 2.66
CAMTA1-208	ENST00000473578	TRPM1	Q7Z4N2	1603 aa		31.69	■■■□□ 2.66
CAMTA1-208	ENST00000473578	CABP2	Q9NPB3	220 aa		31.69	■■■□□ 2.66
CAMTA1-208	ENST00000473578	PLEKHG3	A1L390	1219 aa		31.68	■■■□□ 2.66
CAMTA1-208	ENST00000473578	NBPF8	Q3BBV2	869 aa		31.68	■■■□□ 2.66
CAMTA1-208	ENST00000473578	TONSL	Q96HA7	1378 aa		31.68	■■■□□ 2.66

Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms