RNA–Protein interactions for RNA: ENST00000473522.1

RPUSD3-214, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 547 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-214ENST00000473522 NBPF8Q3BBV2 869 aa25.39■■□□□ 1.66
RPUSD3-214ENST00000473522 TONSLQ96HA7 1378 aa25.39■■□□□ 1.65
RPUSD3-214ENST00000473522 C1orf167Q5SNV9 1468 aa25.37■■□□□ 1.65
RPUSD3-214ENST00000473522 TIMELESSQ9UNS1 1208 aa25.36■■□□□ 1.65
RPUSD3-214ENST00000473522 SAFB2Q14151 953 aaKnown RBP eCLIP25.35■■□□□ 1.65
RPUSD3-214ENST00000473522 KNDC1Q76NI1 1749 aa25.34■■□□□ 1.65
RPUSD3-214ENST00000473522 ORAI2Q96SN7 254 aa25.34■■□□□ 1.65
RPUSD3-214ENST00000473522 ROBO1Q9Y6N7 1651 aa25.32■■□□□ 1.64
RPUSD3-214ENST00000473522 NALCNQ8IZF0 1738 aa25.32■■□□□ 1.64
RPUSD3-214ENST00000473522 KIAA1210Q9ULL0 1709 aa25.3■■□□□ 1.64
RPUSD3-214ENST00000473522 CDC42BPGQ6DT37 1551 aa25.3■■□□□ 1.64
RPUSD3-214ENST00000473522 ESCO1Q5FWF5 840 aa25.29■■□□□ 1.64
RPUSD3-214ENST00000473522 CCER1Q8TC90 406 aaPredicted RBP25.28■■□□□ 1.64
RPUSD3-214ENST00000473522 WASLO00401 505 aaPredicted RBP25.27■■□□□ 1.64
RPUSD3-214ENST00000473522 HIRIP3Q9BW71 556 aaPredicted RBP25.27■■□□□ 1.64
RPUSD3-214ENST00000473522 MINK1Q8N4C8 1332 aaPredicted RBP25.27■■□□□ 1.64
RPUSD3-214ENST00000473522 GPRASP1Q5JY77 1395 aa25.27■■□□□ 1.64
RPUSD3-214ENST00000473522 NUTM2FA1L443 756 aa25.26■■□□□ 1.63
RPUSD3-214ENST00000473522 ROCK2O75116 1388 aaKnown RBP25.26■■□□□ 1.63
RPUSD3-214ENST00000473522 SOS2Q07890 1332 aaPredicted RBP25.23■■□□□ 1.63
RPUSD3-214ENST00000473522 DDX17Q92841 729 aaKnown RBP25.23■■□□□ 1.63
RPUSD3-214ENST00000473522 LRRC59Q96AG4 307 aaKnown RBP25.23■■□□□ 1.63
RPUSD3-214ENST00000473522 AHDC1Q5TGY3 1603 aaPredicted RBP25.23■■□□□ 1.63
RPUSD3-214ENST00000473522 CENPJQ9HC77 1338 aaPredicted RBP25.22■■□□□ 1.63
RPUSD3-214ENST00000473522 JCADQ9P266 1359 aa25.21■■□□□ 1.63
RPUSD3-214ENST00000473522 FOXO3O43524 673 aa25.2■■□□□ 1.62
RPUSD3-214ENST00000473522 CARD11Q9BXL7 1154 aa25.2■■□□□ 1.62
RPUSD3-214ENST00000473522 ANKARQ7Z5J8 1434 aa25.2■■□□□ 1.62
RPUSD3-214ENST00000473522 CDK19Q9BWU1 502 aa25.19■■□□□ 1.62
RPUSD3-214ENST00000473522 PHF8Q9UPP1 1060 aa25.19■■□□□ 1.62
RPUSD3-214ENST00000473522 NPHP3Q7Z494 1330 aa25.18■■□□□ 1.62
RPUSD3-214ENST00000473522 EIF3AQ14152 1382 aaKnown RBP25.18■■□□□ 1.62
RPUSD3-214ENST00000473522 PRR36Q9H6K5 1346 aa25.17■■□□□ 1.62
RPUSD3-214ENST00000473522 ADGRB2O60241 1585 aa25.17■■□□□ 1.62
RPUSD3-214ENST00000473522 TRPM1Q7Z4N2 1603 aa25.16■■□□□ 1.62
RPUSD3-214ENST00000473522 RALGAPBQ86X10 1494 aa25.15■■□□□ 1.62
RPUSD3-214ENST00000473522 NUDT16Q96DE0 195 aaKnown RBP25.15■■□□□ 1.62
RPUSD3-214ENST00000473522 COL16A1Q07092 1604 aaPredicted RBP25.14■■□□□ 1.61
RPUSD3-214ENST00000473522 SPATA31A6Q5VVP1 1343 aa25.13■■□□□ 1.61
RPUSD3-214ENST00000473522 ARHGEF28Q8N1W1 1705 aaKnown RBP25.12■■□□□ 1.61
RPUSD3-214ENST00000473522 FMN2Q9NZ56 1722 aa25.12■■□□□ 1.61
RPUSD3-214ENST00000473522 CCDC61Q9Y6R9 512 aa25.11■■□□□ 1.61
RPUSD3-214ENST00000473522 PHLPP1O60346 1717 aa25.11■■□□□ 1.61
RPUSD3-214ENST00000473522 KRT28Q7Z3Y7 464 aa25.1■■□□□ 1.61
RPUSD3-214ENST00000473522 TULP4Q9NRJ4 1543 aa25.09■■□□□ 1.61
RPUSD3-214ENST00000473522 PMFBP1Q8TBY8 1022 aa25.09■■□□□ 1.61
RPUSD3-214ENST00000473522 NHSL1Q5SYE7 1610 aa25.08■■□□□ 1.61
RPUSD3-214ENST00000473522 PLEKHG3A1L390 1219 aa25.08■■□□□ 1.61
RPUSD3-214ENST00000473522 PSME1Q06323 249 aa25.08■■□□□ 1.61
RPUSD3-214ENST00000473522 DISP3Q9P2K9 1392 aa25.07■■□□□ 1.6
RPUSD3-214ENST00000473522 XPCQ01831 940 aaPredicted RBP25.07■■□□□ 1.6
RPUSD3-214ENST00000473522 PXDNQ92626 1479 aa25.07■■□□□ 1.6
RPUSD3-214ENST00000473522 PNPLA6Q8IY17 1366 aa25.06■■□□□ 1.6
RPUSD3-214ENST00000473522 EVC2Q86UK5 1308 aa25.06■■□□□ 1.6
RPUSD3-214ENST00000473522 SBNO2Q9Y2G9 1366 aa25.05■■□□□ 1.6
RPUSD3-214ENST00000473522 SRPK2P78362 688 aaKnown RBP25.05■■□□□ 1.6
RPUSD3-214ENST00000473522 CABP2Q9NPB3 220 aa25.05■■□□□ 1.6
RPUSD3-214ENST00000473522 SPATA31A3Q5VYP0 1347 aa25.04■■□□□ 1.6
RPUSD3-214ENST00000473522 ATP7BP35670 1465 aa25.03■■□□□ 1.6
RPUSD3-214ENST00000473522 USP32Q8NFA0 1604 aa25.02■■□□□ 1.6
RPUSD3-214ENST00000473522 NGDNQ8NEJ9 315 aaKnown RBP25.02■■□□□ 1.6
RPUSD3-214ENST00000473522 MED1Q15648 1581 aaPredicted RBP25.01■■□□□ 1.59
RPUSD3-214ENST00000473522 ST20-MTHFSA0A0A6YYL1 179 aa25.01■■□□□ 1.59
RPUSD3-214ENST00000473522 SLC24A1O60721 1099 aa25.01■■□□□ 1.59
RPUSD3-214ENST00000473522 SBNO1A3KN83 1393 aa25.01■■□□□ 1.59
RPUSD3-214ENST00000473522 TESK2Q96S53 571 aa25■■□□□ 1.59
RPUSD3-214ENST00000473522 PUS7Q96PZ0 661 aaKnown RBP24.99■■□□□ 1.59
RPUSD3-214ENST00000473522 RGS17Q9UGC6 210 aaPredicted RBP24.99■■□□□ 1.59
RPUSD3-214ENST00000473522 POLR3AO14802 1390 aaPredicted RBP24.98■■□□□ 1.59
RPUSD3-214ENST00000473522 ACEP12821 1306 aa24.98■■□□□ 1.59
RPUSD3-214ENST00000473522 CABP1Q9NZU7 370 aa24.98■■□□□ 1.59
RPUSD3-214ENST00000473522 KIF1AQ12756 1690 aa24.97■■□□□ 1.59
RPUSD3-214ENST00000473522 NUTM2BA6NNL0 878 aaPredicted RBP24.97■■□□□ 1.59
RPUSD3-214ENST00000473522 NUTM2EB1AL46 878 aaPredicted RBP24.97■■□□□ 1.59
RPUSD3-214ENST00000473522 NUTM2AQ8IVF1 878 aaPredicted RBP24.97■■□□□ 1.59
RPUSD3-214ENST00000473522 PHF23Q9BUL5 403 aaPredicted RBP24.96■■□□□ 1.59
RPUSD3-214ENST00000473522 SHPRHQ149N8 1683 aa24.94■■□□□ 1.58
RPUSD3-214ENST00000473522 LRP6O75581 1613 aa24.94■■□□□ 1.58
RPUSD3-214ENST00000473522 USP47Q96K76 1375 aa24.93■■□□□ 1.58
RPUSD3-214ENST00000473522 TNS3Q68CZ2 1445 aa24.92■■□□□ 1.58
RPUSD3-214ENST00000473522 PPIP5K1Q6PFW1 1433 aa24.92■■□□□ 1.58
RPUSD3-214ENST00000473522 MEX3CQ5U5Q3 659 aaKnown RBP24.91■■□□□ 1.58
RPUSD3-214ENST00000473522 ARHGEF10O15013 1369 aa24.91■■□□□ 1.58
RPUSD3-214ENST00000473522 ATAD2Q6PL18 1390 aa24.91■■□□□ 1.58
RPUSD3-214ENST00000473522 ZNF692Q9BU19 519 aaPredicted RBP24.9■■□□□ 1.58
RPUSD3-214ENST00000473522 QRICH2Q9H0J4 1663 aa24.9■■□□□ 1.58
RPUSD3-214ENST00000473522 RGPD8O14715 1765 aaPredicted RBP24.89■■□□□ 1.57
RPUSD3-214ENST00000473522 BRD4O60885 1362 aaPredicted RBP24.88■■□□□ 1.57
RPUSD3-214ENST00000473522 ADAMTS2O95450 1211 aa24.87■■□□□ 1.57
RPUSD3-214ENST00000473522 LMOD2Q6P5Q4 547 aa24.87■■□□□ 1.57
RPUSD3-214ENST00000473522 PAK3O75914 559 aaPredicted RBP24.86■■□□□ 1.57
RPUSD3-214ENST00000473522 ILDR2Q71H61 639 aa24.86■■□□□ 1.57
RPUSD3-214ENST00000473522 COL22A1Q8NFW1 1626 aaPredicted RBP24.84■■□□□ 1.57
RPUSD3-214ENST00000473522 TMF1P82094 1093 aa24.84■■□□□ 1.57
RPUSD3-214ENST00000473522 ZNF772Q68DY9 489 aaPredicted RBP24.84■■□□□ 1.57
RPUSD3-214ENST00000473522 POTEAQ6S8J7 498 aa24.84■■□□□ 1.57
RPUSD3-214ENST00000473522 FNBP4Q8N3X1 1017 aaPredicted RBP24.84■■□□□ 1.57
RPUSD3-214ENST00000473522 CABLES1Q8TDN4 633 aa24.84■■□□□ 1.57
RPUSD3-214ENST00000473522 NGLY1Q96IV0 654 aa24.83■■□□□ 1.57
RPUSD3-214ENST00000473522 C8orf37Q96NL8 207 aa24.83■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms