RNA–Protein interactions for RNA: ENST00000473308.1

C1orf56-203, Transcript of chromosome 1 open reading frame 56, humanhuman

TSL 3

Gene C1orf56, Length 323 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C1orf56-203ENST00000473308 DLC1Q96QB1 1528 aa13.26□□□□□ -0.29
C1orf56-203ENST00000473308 PRAM1Q96QH2 718 aa13.26□□□□□ -0.29
C1orf56-203ENST00000473308 COL16A1Q07092 1604 aaPredicted RBP13.25□□□□□ -0.29
C1orf56-203ENST00000473308 MED1Q15648 1581 aaPredicted RBP13.25□□□□□ -0.29
C1orf56-203ENST00000473308 CDC42BPGQ6DT37 1551 aa13.25□□□□□ -0.29
C1orf56-203ENST00000473308 TRAK1Q9UPV9 953 aa13.25□□□□□ -0.29
C1orf56-203ENST00000473308 SAFB2Q14151 953 aaKnown RBP eCLIP13.24□□□□□ -0.29
C1orf56-203ENST00000473308 ORAI2Q96SN7 254 aa13.24□□□□□ -0.29
C1orf56-203ENST00000473308 JCADQ9P266 1359 aa13.23□□□□□ -0.29
C1orf56-203ENST00000473308 DDX17Q92841 729 aaKnown RBP13.23□□□□□ -0.29
C1orf56-203ENST00000473308 POGKQ9P215 609 aa13.23□□□□□ -0.29
C1orf56-203ENST00000473308 NHSL1Q5SYE7 1610 aa13.22□□□□□ -0.29
C1orf56-203ENST00000473308 NBPF1Q3BBV0 1214 aa13.22□□□□□ -0.29
C1orf56-203ENST00000473308 KIAA1210Q9ULL0 1709 aa13.22□□□□□ -0.29
C1orf56-203ENST00000473308 NUTM2FA1L443 756 aa13.21□□□□□ -0.29
C1orf56-203ENST00000473308 ESCO1Q5FWF5 840 aa13.2□□□□□ -0.3
C1orf56-203ENST00000473308 FMN2Q9NZ56 1722 aa13.19□□□□□ -0.3
C1orf56-203ENST00000473308 ILDR2Q71H61 639 aa13.19□□□□□ -0.3
C1orf56-203ENST00000473308 LRRC59Q96AG4 307 aaKnown RBP13.19□□□□□ -0.3
C1orf56-203ENST00000473308 SOS2Q07890 1332 aaPredicted RBP13.18□□□□□ -0.3
C1orf56-203ENST00000473308 MINK1Q8N4C8 1332 aaPredicted RBP13.18□□□□□ -0.3
C1orf56-203ENST00000473308 HIRIP3Q9BW71 556 aaPredicted RBP13.18□□□□□ -0.3
C1orf56-203ENST00000473308 PCGF6Q9BYE7 350 aa13.18□□□□□ -0.3
C1orf56-203ENST00000473308 ARHGEF28Q8N1W1 1705 aaKnown RBP13.18□□□□□ -0.3
C1orf56-203ENST00000473308 SPATA31A6Q5VVP1 1343 aa13.17□□□□□ -0.3
C1orf56-203ENST00000473308 ADGRB2O60241 1585 aa13.17□□□□□ -0.3
C1orf56-203ENST00000473308 PHF23Q9BUL5 403 aaPredicted RBP13.17□□□□□ -0.3
C1orf56-203ENST00000473308 SHPRHQ149N8 1683 aa13.17□□□□□ -0.3
C1orf56-203ENST00000473308 FOXO3O43524 673 aa13.16□□□□□ -0.3
C1orf56-203ENST00000473308 NPHP3Q7Z494 1330 aa13.15□□□□□ -0.3
C1orf56-203ENST00000473308 WASLO00401 505 aaPredicted RBP13.15□□□□□ -0.3
C1orf56-203ENST00000473308 NBPF8Q3BBV2 869 aa13.15□□□□□ -0.3
C1orf56-203ENST00000473308 RGS17Q9UGC6 210 aaPredicted RBP13.15□□□□□ -0.3
C1orf56-203ENST00000473308 PNPLA6Q8IY17 1366 aa13.15□□□□□ -0.3
C1orf56-203ENST00000473308 RGPD8O14715 1765 aaPredicted RBP13.15□□□□□ -0.31
C1orf56-203ENST00000473308 LRP6O75581 1613 aa13.14□□□□□ -0.31
C1orf56-203ENST00000473308 TONSLQ96HA7 1378 aa13.14□□□□□ -0.31
C1orf56-203ENST00000473308 ANKARQ7Z5J8 1434 aa13.13□□□□□ -0.31
C1orf56-203ENST00000473308 TRPM1Q7Z4N2 1603 aa13.13□□□□□ -0.31
C1orf56-203ENST00000473308 USP32Q8NFA0 1604 aa13.13□□□□□ -0.31
C1orf56-203ENST00000473308 PXDNQ92626 1479 aa13.13□□□□□ -0.31
C1orf56-203ENST00000473308 XPCQ01831 940 aaPredicted RBP13.13□□□□□ -0.31
C1orf56-203ENST00000473308 PHF8Q9UPP1 1060 aa13.13□□□□□ -0.31
C1orf56-203ENST00000473308 PRR36Q9H6K5 1346 aa13.13□□□□□ -0.31
C1orf56-203ENST00000473308 KIF1AQ12756 1690 aa13.12□□□□□ -0.31
C1orf56-203ENST00000473308 TULP4Q9NRJ4 1543 aa13.12□□□□□ -0.31
C1orf56-203ENST00000473308 CENPJQ9HC77 1338 aaPredicted RBP13.12□□□□□ -0.31
C1orf56-203ENST00000473308 ROCK2O75116 1388 aaKnown RBP13.11□□□□□ -0.31
C1orf56-203ENST00000473308 EIF3AQ14152 1382 aaKnown RBP13.11□□□□□ -0.31
C1orf56-203ENST00000473308 NUTM2BA6NNL0 878 aaPredicted RBP13.11□□□□□ -0.31
C1orf56-203ENST00000473308 NUTM2EB1AL46 878 aaPredicted RBP13.11□□□□□ -0.31
C1orf56-203ENST00000473308 NUTM2AQ8IVF1 878 aaPredicted RBP13.11□□□□□ -0.31
C1orf56-203ENST00000473308 GPRASP1Q5JY77 1395 aa13.1□□□□□ -0.31
C1orf56-203ENST00000473308 MEX3CQ5U5Q3 659 aaKnown RBP13.1□□□□□ -0.31
C1orf56-203ENST00000473308 KRT28Q7Z3Y7 464 aa13.1□□□□□ -0.31
C1orf56-203ENST00000473308 PMFBP1Q8TBY8 1022 aa13.1□□□□□ -0.31
C1orf56-203ENST00000473308 CDK19Q9BWU1 502 aa13.1□□□□□ -0.31
C1orf56-203ENST00000473308 NUDT16Q96DE0 195 aaKnown RBP13.09□□□□□ -0.31
C1orf56-203ENST00000473308 POTEAQ6S8J7 498 aa13.08□□□□□ -0.32
C1orf56-203ENST00000473308 ATP7BP35670 1465 aa13.08□□□□□ -0.32
C1orf56-203ENST00000473308 SPATA31A3Q5VYP0 1347 aa13.08□□□□□ -0.32
C1orf56-203ENST00000473308 COL22A1Q8NFW1 1626 aaPredicted RBP13.07□□□□□ -0.32
C1orf56-203ENST00000473308 PSME1Q06323 249 aa13.07□□□□□ -0.32
C1orf56-203ENST00000473308 RALGAPBQ86X10 1494 aa13.06□□□□□ -0.32
C1orf56-203ENST00000473308 CLSPNQ9HAW4 1339 aa13.06□□□□□ -0.32
C1orf56-203ENST00000473308 SBNO1A3KN83 1393 aa13.06□□□□□ -0.32
C1orf56-203ENST00000473308 QRICH2Q9H0J4 1663 aa13.05□□□□□ -0.32
C1orf56-203ENST00000473308 CARD11Q9BXL7 1154 aa13.05□□□□□ -0.32
C1orf56-203ENST00000473308 CCDC61Q9Y6R9 512 aa13.05□□□□□ -0.32
C1orf56-203ENST00000473308 TNS3Q68CZ2 1445 aa13.05□□□□□ -0.32
C1orf56-203ENST00000473308 ADAMTS2O95450 1211 aa13.04□□□□□ -0.32
C1orf56-203ENST00000473308 NGDNQ8NEJ9 315 aaKnown RBP13.04□□□□□ -0.32
C1orf56-203ENST00000473308 C8orf37Q96NL8 207 aa13.04□□□□□ -0.32
C1orf56-203ENST00000473308 CABP2Q9NPB3 220 aa13.04□□□□□ -0.32
C1orf56-203ENST00000473308 ITSN1Q15811 1721 aa13.03□□□□□ -0.32
C1orf56-203ENST00000473308 PLEKHG3A1L390 1219 aa13.03□□□□□ -0.32
C1orf56-203ENST00000473308 SOCS7O14512 581 aa13.03□□□□□ -0.32
C1orf56-203ENST00000473308 SRPK2P78362 688 aaKnown RBP13.03□□□□□ -0.32
C1orf56-203ENST00000473308 ZNF772Q68DY9 489 aaPredicted RBP13.03□□□□□ -0.32
C1orf56-203ENST00000473308 AFF2P51816 1311 aa13.03□□□□□ -0.32
C1orf56-203ENST00000473308 TOPAZ1Q8N9V7 1692 aa13.02□□□□□ -0.32
C1orf56-203ENST00000473308 TRPM3Q9HCF6 1732 aaPredicted RBP13.02□□□□□ -0.32
C1orf56-203ENST00000473308 EVC2Q86UK5 1308 aa13.02□□□□□ -0.33
C1orf56-203ENST00000473308 POLR3AO14802 1390 aaPredicted RBP13.02□□□□□ -0.33
C1orf56-203ENST00000473308 LMOD2Q6P5Q4 547 aa13.01□□□□□ -0.33
C1orf56-203ENST00000473308 NGLY1Q96IV0 654 aa13.01□□□□□ -0.33
C1orf56-203ENST00000473308 TIMELESSQ9UNS1 1208 aa13.01□□□□□ -0.33
C1orf56-203ENST00000473308 ACEP12821 1306 aa13.01□□□□□ -0.33
C1orf56-203ENST00000473308 ARHGEF10O15013 1369 aa13.01□□□□□ -0.33
C1orf56-203ENST00000473308 PPIP5K1Q6PFW1 1433 aa12.99□□□□□ -0.33
C1orf56-203ENST00000473308 SBNO2Q9Y2G9 1366 aa12.99□□□□□ -0.33
C1orf56-203ENST00000473308 CCER1Q8TC90 406 aaPredicted RBP12.99□□□□□ -0.33
C1orf56-203ENST00000473308 CABLES1Q8TDN4 633 aa12.99□□□□□ -0.33
C1orf56-203ENST00000473308 ALS2Q96Q42 1657 aa12.99□□□□□ -0.33
C1orf56-203ENST00000473308 PAK3O75914 559 aaPredicted RBP12.98□□□□□ -0.33
C1orf56-203ENST00000473308 FNBP4Q8N3X1 1017 aaPredicted RBP12.98□□□□□ -0.33
C1orf56-203ENST00000473308 CABP1Q9NZU7 370 aa12.98□□□□□ -0.33
C1orf56-203ENST00000473308 MARF1Q9Y4F3 1742 aaKnown RBP12.97□□□□□ -0.33
C1orf56-203ENST00000473308 PLEKHG5O94827 1062 aa12.97□□□□□ -0.33
C1orf56-203ENST00000473308 QTRT2Q9H974 415 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms