RNA–Protein interactions for RNA: ENST00000473171.5

LSAMP-202, Transcript of limbic system associated membrane protein, humanhuman

TSL 3

Gene LSAMP, Length 640 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSAMP-202ENST00000473171 POTEJP0CG39 1038 aa12.36□□□□□ -0.43
LSAMP-202ENST00000473171 UBR1Q8IWV7 1749 aa12.36□□□□□ -0.43
LSAMP-202ENST00000473171 MROH1Q8NDA8 1641 aa12.36□□□□□ -0.43
LSAMP-202ENST00000473171 PROSER2Q86WR7 435 aaPredicted RBP12.35□□□□□ -0.43
LSAMP-202ENST00000473171 SLC26A8Q96RN1 970 aa12.35□□□□□ -0.43
LSAMP-202ENST00000473171 SETD1AO15047 1707 aaKnown RBP12.34□□□□□ -0.43
LSAMP-202ENST00000473171 TMEM2Q9UHN6 1383 aa12.34□□□□□ -0.43
LSAMP-202ENST00000473171 MAP3K1Q13233 1512 aa12.33□□□□□ -0.44
LSAMP-202ENST00000473171 PDCD7Q8N8D1 485 aaKnown RBP12.33□□□□□ -0.44
LSAMP-202ENST00000473171 ROBO1Q9Y6N7 1651 aa12.32□□□□□ -0.44
LSAMP-202ENST00000473171 KCNA6P17658 529 aa12.32□□□□□ -0.44
LSAMP-202ENST00000473171 XIRP1Q702N8 1843 aaKnown RBP12.32□□□□□ -0.44
LSAMP-202ENST00000473171 CEP152O94986 1710 aa12.31□□□□□ -0.44
LSAMP-202ENST00000473171 MAST1Q9Y2H9 1570 aa12.31□□□□□ -0.44
LSAMP-202ENST00000473171 EIF2AK4Q9P2K8 1649 aaKnown RBP12.31□□□□□ -0.44
LSAMP-202ENST00000473171 G3V3G9 751 aa12.31□□□□□ -0.44
LSAMP-202ENST00000473171 SOX12O15370 315 aa12.31□□□□□ -0.44
LSAMP-202ENST00000473171 L3MBTL3Q96JM7 780 aaPredicted RBP12.31□□□□□ -0.44
LSAMP-202ENST00000473171 TRIM52Q96A61 297 aa12.3□□□□□ -0.44
LSAMP-202ENST00000473171 BCANQ96GW7 911 aa12.3□□□□□ -0.44
LSAMP-202ENST00000473171 RRP7BPQ9NSQ0 103 aa12.3□□□□□ -0.44
LSAMP-202ENST00000473171 MSH6P52701 1360 aa12.3□□□□□ -0.44
LSAMP-202ENST00000473171 KIF15Q9NS87 1388 aa12.3□□□□□ -0.44
LSAMP-202ENST00000473171 JCADQ9P266 1359 aa12.3□□□□□ -0.44
LSAMP-202ENST00000473171 PIK3C2BO00750 1634 aa12.29□□□□□ -0.44
LSAMP-202ENST00000473171 ARHGAP31Q2M1Z3 1444 aa12.29□□□□□ -0.44
LSAMP-202ENST00000473171 DUOX2Q9NRD8 1548 aa12.29□□□□□ -0.44
LSAMP-202ENST00000473171 UPF1Q92900 1129 aaKnown RBP eCLIP12.29□□□□□ -0.44
LSAMP-202ENST00000473171 LRRC9Q6ZRR7 1453 aa12.28□□□□□ -0.44
LSAMP-202ENST00000473171 PRDM15P57071 1507 aaPredicted RBP12.28□□□□□ -0.44
LSAMP-202ENST00000473171 EFCAB6Q5THR3 1501 aa12.28□□□□□ -0.44
LSAMP-202ENST00000473171 IDI1Q13907 227 aa12.28□□□□□ -0.44
LSAMP-202ENST00000473171 MEX3CQ5U5Q3 659 aaKnown RBP12.28□□□□□ -0.44
LSAMP-202ENST00000473171 SLAIN2Q9P270 581 aa12.28□□□□□ -0.44
LSAMP-202ENST00000473171 LRP6O75581 1613 aa12.26□□□□□ -0.45
LSAMP-202ENST00000473171 KANK4Q5T7N3 995 aaPredicted RBP12.26□□□□□ -0.45
LSAMP-202ENST00000473171 DPY19L2Q6NUT2 758 aa12.26□□□□□ -0.45
LSAMP-202ENST00000473171 NKTRP30414 1462 aaKnown RBP12.26□□□□□ -0.45
LSAMP-202ENST00000473171 C3orf67Q6ZVT6 689 aa12.25□□□□□ -0.45
LSAMP-202ENST00000473171 PHF8Q9UPP1 1060 aa12.25□□□□□ -0.45
LSAMP-202ENST00000473171 MYOM3Q5VTT5 1437 aa12.25□□□□□ -0.45
LSAMP-202ENST00000473171 ERBINQ96RT1 1412 aa12.25□□□□□ -0.45
LSAMP-202ENST00000473171 TET3O43151 1660 aa12.25□□□□□ -0.45
LSAMP-202ENST00000473171 CHGAP10645 457 aaKnown RBP12.24□□□□□ -0.45
LSAMP-202ENST00000473171 KANK1Q14678 1352 aa12.24□□□□□ -0.45
LSAMP-202ENST00000473171 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.24□□□□□ -0.45
LSAMP-202ENST00000473171 PHLPP1O60346 1717 aa12.23□□□□□ -0.45
LSAMP-202ENST00000473171 NWD1Q149M9 1564 aa12.23□□□□□ -0.45
LSAMP-202ENST00000473171 NLRP6P59044 892 aa12.23□□□□□ -0.45
LSAMP-202ENST00000473171 AMER1Q5JTC6 1135 aaPredicted RBP12.23□□□□□ -0.45
LSAMP-202ENST00000473171 ZNF772Q68DY9 489 aaPredicted RBP12.23□□□□□ -0.45
LSAMP-202ENST00000473171 C14orf37Q86TY3 774 aa12.23□□□□□ -0.45
LSAMP-202ENST00000473171 CFAP65Q6ZU64 1925 aaKnown RBP12.23□□□□□ -0.45
LSAMP-202ENST00000473171 ABCC5O15440 1437 aa12.22□□□□□ -0.45
LSAMP-202ENST00000473171 SPATA31A6Q5VVP1 1343 aa12.22□□□□□ -0.45
LSAMP-202ENST00000473171 SLAIN1Q8ND83 568 aa12.22□□□□□ -0.45
LSAMP-202ENST00000473171 NUTM2BA6NNL0 878 aaPredicted RBP12.21□□□□□ -0.45
LSAMP-202ENST00000473171 NUTM2EB1AL46 878 aaPredicted RBP12.21□□□□□ -0.45
LSAMP-202ENST00000473171 NUTM2AQ8IVF1 878 aaPredicted RBP12.21□□□□□ -0.45
LSAMP-202ENST00000473171 CHIC2Q9UKJ5 165 aa12.21□□□□□ -0.45
LSAMP-202ENST00000473171 BOLA1Q9Y3E2 137 aa12.21□□□□□ -0.45
LSAMP-202ENST00000473171 COL16A1Q07092 1604 aaPredicted RBP12.21□□□□□ -0.46
LSAMP-202ENST00000473171 ADGRB3O60242 1522 aa12.21□□□□□ -0.46
LSAMP-202ENST00000473171 PPP1R15AO75807 674 aaPredicted RBP12.2□□□□□ -0.46
LSAMP-202ENST00000473171 RXRBP28702 533 aa12.2□□□□□ -0.46
LSAMP-202ENST00000473171 HS6ST3Q8IZP7 471 aa12.2□□□□□ -0.46
LSAMP-202ENST00000473171 NOS1P29475 1434 aa12.2□□□□□ -0.46
LSAMP-202ENST00000473171 VPS8Q8N3P4 1428 aa12.2□□□□□ -0.46
LSAMP-202ENST00000473171 FGD6Q6ZV73 1430 aa12.19□□□□□ -0.46
LSAMP-202ENST00000473171 PLEKHG1Q9ULL1 1385 aa12.18□□□□□ -0.46
LSAMP-202ENST00000473171 LMTK2Q8IWU2 1503 aa12.18□□□□□ -0.46
LSAMP-202ENST00000473171 NUTM2DQ5VT03 806 aaPredicted RBP12.18□□□□□ -0.46
LSAMP-202ENST00000473171 DAPK1P53355 1430 aa12.18□□□□□ -0.46
LSAMP-202ENST00000473171 SLC52A1Q9NWF4 448 aa12.17□□□□□ -0.46
LSAMP-202ENST00000473171 ZFYVE9O95405 1425 aa12.17□□□□□ -0.46
LSAMP-202ENST00000473171 RIMS2Q9UQ26 1411 aa12.17□□□□□ -0.46
LSAMP-202ENST00000473171 ATF3P18847 181 aa12.16□□□□□ -0.46
LSAMP-202ENST00000473171 MFRPQ9BY79 579 aa12.16□□□□□ -0.46
LSAMP-202ENST00000473171 KDM5AP29375 1690 aaKnown RBP12.16□□□□□ -0.46
LSAMP-202ENST00000473171 AFF2P51816 1311 aa12.15□□□□□ -0.46
LSAMP-202ENST00000473171 POTEMA6NI47 508 aa12.15□□□□□ -0.46
LSAMP-202ENST00000473171 CADPS2Q86UW7 1296 aa12.15□□□□□ -0.46
LSAMP-202ENST00000473171 MS4A4AQ96JQ5 239 aa12.15□□□□□ -0.46
LSAMP-202ENST00000473171 ANKRD30AQ9BXX3 1397 aa12.15□□□□□ -0.46
LSAMP-202ENST00000473171 BRINP3Q76B58 766 aa12.14□□□□□ -0.47
LSAMP-202ENST00000473171 AHDC1Q5TGY3 1603 aaPredicted RBP12.14□□□□□ -0.47
LSAMP-202ENST00000473171 CROCC2H7BZ55 1655 aa12.13□□□□□ -0.47
LSAMP-202ENST00000473171 FBXO22Q8NEZ5 403 aa12.13□□□□□ -0.47
LSAMP-202ENST00000473171 C19orf44Q9H6X5 657 aa12.13□□□□□ -0.47
LSAMP-202ENST00000473171 RTN4Q9NQC3 1192 aaKnown RBP12.13□□□□□ -0.47
LSAMP-202ENST00000473171 TBX22Q9Y458 520 aa12.13□□□□□ -0.47
LSAMP-202ENST00000473171 RGS12O14924 1447 aa12.12□□□□□ -0.47
LSAMP-202ENST00000473171 NCOA3Q9Y6Q9 1424 aa12.12□□□□□ -0.47
LSAMP-202ENST00000473171 PTPN23Q9H3S7 1636 aa12.12□□□□□ -0.47
LSAMP-202ENST00000473171 C8orf37Q96NL8 207 aa12.12□□□□□ -0.47
LSAMP-202ENST00000473171 ADAMTS13Q76LX8 1427 aa12.11□□□□□ -0.47
LSAMP-202ENST00000473171 CDK12Q9NYV4 1490 aaPredicted RBP12.11□□□□□ -0.47
LSAMP-202ENST00000473171 HDGFP51858 240 aaKnown RBP12.11□□□□□ -0.47
LSAMP-202ENST00000473171 SRCAPQ6ZRS2 3230 aa12.11□□□□□ -0.47
LSAMP-202ENST00000473171 LOC105371045A0A1W2PR82 267 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms