RNA–Protein interactions for RNA: ENST00000473043.5

RAPGEF4-209, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5

Gene RAPGEF4, Length 1,075 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-209ENST00000473043 CAMK2BQ13554 666 aa11.35□□□□□ -0.59
RAPGEF4-209ENST00000473043 GPIHBP1Q8IV16 184 aa11.35□□□□□ -0.59
RAPGEF4-209ENST00000473043 RRP7BPQ9NSQ0 103 aa11.35□□□□□ -0.59
RAPGEF4-209ENST00000473043 NLRP1Q9C000 1473 aa11.35□□□□□ -0.59
RAPGEF4-209ENST00000473043 LMTK2Q8IWU2 1503 aa11.35□□□□□ -0.59
RAPGEF4-209ENST00000473043 ANKRD30AQ9BXX3 1397 aa11.34□□□□□ -0.59
RAPGEF4-209ENST00000473043 ARHGAP31Q2M1Z3 1444 aa11.34□□□□□ -0.59
RAPGEF4-209ENST00000473043 POLR1AO95602 1720 aaPredicted RBP11.33□□□□□ -0.6
RAPGEF4-209ENST00000473043 CERKQ8TCT0 537 aa11.33□□□□□ -0.6
RAPGEF4-209ENST00000473043 CHIC2Q9UKJ5 165 aa11.33□□□□□ -0.6
RAPGEF4-209ENST00000473043 UGGT1Q9NYU2 1555 aa11.32□□□□□ -0.6
RAPGEF4-209ENST00000473043 EFCAB6Q5THR3 1501 aa11.3□□□□□ -0.6
RAPGEF4-209ENST00000473043 FAM50AQ14320 339 aaKnown RBP11.3□□□□□ -0.6
RAPGEF4-209ENST00000473043 UBR1Q8IWV7 1749 aa11.29□□□□□ -0.6
RAPGEF4-209ENST00000473043 UNC13BO14795 1591 aa11.29□□□□□ -0.6
RAPGEF4-209ENST00000473043 SYNMO15061 1565 aa11.29□□□□□ -0.6
RAPGEF4-209ENST00000473043 ANKRD50Q9ULJ7 1429 aa11.29□□□□□ -0.6
RAPGEF4-209ENST00000473043 MKRN3Q13064 507 aaKnown RBP11.29□□□□□ -0.6
RAPGEF4-209ENST00000473043 ZNF335Q9H4Z2 1342 aaPredicted RBP11.29□□□□□ -0.6
RAPGEF4-209ENST00000473043 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.28□□□□□ -0.6
RAPGEF4-209ENST00000473043 MED14O60244 1454 aa11.28□□□□□ -0.6
RAPGEF4-209ENST00000473043 IQSEC2Q5JU85 1478 aa11.28□□□□□ -0.6
RAPGEF4-209ENST00000473043 ROCK1Q13464 1354 aa11.28□□□□□ -0.6
RAPGEF4-209ENST00000473043 NOS1P29475 1434 aa11.27□□□□□ -0.6
RAPGEF4-209ENST00000473043 ARHGAP23Q9P227 1491 aa11.27□□□□□ -0.6
RAPGEF4-209ENST00000473043 RBM26Q5T8P6 1007 aaKnown RBP11.27□□□□□ -0.61
RAPGEF4-209ENST00000473043 PPARGC1BQ86YN6 1023 aaKnown RBP11.27□□□□□ -0.61
RAPGEF4-209ENST00000473043 MS4A4AQ96JQ5 239 aa11.27□□□□□ -0.61
RAPGEF4-209ENST00000473043 PIK3C2BO00750 1634 aa11.27□□□□□ -0.61
RAPGEF4-209ENST00000473043 SLIT1O75093 1534 aa11.26□□□□□ -0.61
RAPGEF4-209ENST00000473043 SPDYE16A6NNV3 312 aaPredicted RBP11.26□□□□□ -0.61
RAPGEF4-209ENST00000473043 FXR2P51116 673 aaKnown RBP eCLIP11.26□□□□□ -0.61
RAPGEF4-209ENST00000473043 IL27Q8NEV9 243 aa11.26□□□□□ -0.61
RAPGEF4-209ENST00000473043 ZMYND15Q9H091 742 aa11.26□□□□□ -0.61
RAPGEF4-209ENST00000473043 KANK1Q14678 1352 aa11.26□□□□□ -0.61
RAPGEF4-209ENST00000473043 RRBP1Q9P2E9 1410 aaKnown RBP11.26□□□□□ -0.61
RAPGEF4-209ENST00000473043 CFAP65Q6ZU64 1925 aaKnown RBP11.25□□□□□ -0.61
RAPGEF4-209ENST00000473043 TET3O43151 1660 aa11.25□□□□□ -0.61
RAPGEF4-209ENST00000473043 KDM4CQ9H3R0 1056 aa11.25□□□□□ -0.61
RAPGEF4-209ENST00000473043 NPHP4O75161 1426 aaPredicted RBP11.25□□□□□ -0.61
RAPGEF4-209ENST00000473043 IQGAP1P46940 1657 aa11.24□□□□□ -0.61
RAPGEF4-209ENST00000473043 THEMISQ8N1K5 641 aaPredicted RBP11.24□□□□□ -0.61
RAPGEF4-209ENST00000473043 KDM5AP29375 1690 aaKnown RBP11.24□□□□□ -0.61
RAPGEF4-209ENST00000473043 PPP1R15BQ5SWA1 713 aa11.23□□□□□ -0.61
RAPGEF4-209ENST00000473043 RSPH6AQ9H0K4 717 aa11.23□□□□□ -0.61
RAPGEF4-209ENST00000473043 GPBP1L1Q9HC44 474 aaPredicted RBP11.23□□□□□ -0.61
RAPGEF4-209ENST00000473043 RPRD2Q5VT52 1461 aaKnown RBP11.23□□□□□ -0.61
RAPGEF4-209ENST00000473043 SCAF11Q99590 1463 aaKnown RBP11.23□□□□□ -0.61
RAPGEF4-209ENST00000473043 IQGAP3Q86VI3 1631 aa11.23□□□□□ -0.61
RAPGEF4-209ENST00000473043 GCC2Q8IWJ2 1684 aa11.23□□□□□ -0.61
RAPGEF4-209ENST00000473043 ADGRB3O60242 1522 aa11.22□□□□□ -0.61
RAPGEF4-209ENST00000473043 TMEM106CQ9BVX2 250 aa11.22□□□□□ -0.61
RAPGEF4-209ENST00000473043 GPHNQ9NQX3 736 aaPredicted RBP11.22□□□□□ -0.61
RAPGEF4-209ENST00000473043 STRCP1A6NGW2 1772 aa11.21□□□□□ -0.61
RAPGEF4-209ENST00000473043 E9PCH4 1651 aa11.21□□□□□ -0.61
RAPGEF4-209ENST00000473043 TRIM66O15016 1216 aa11.21□□□□□ -0.61
RAPGEF4-209ENST00000473043 MLLT3P42568 568 aaPredicted RBP11.21□□□□□ -0.61
RAPGEF4-209ENST00000473043 PDE4DQ08499 809 aa11.21□□□□□ -0.61
RAPGEF4-209ENST00000473043 ANKLE2Q86XL3 938 aa11.21□□□□□ -0.61
RAPGEF4-209ENST00000473043 ZRANB1Q9UGI0 708 aa11.21□□□□□ -0.61
RAPGEF4-209ENST00000473043 CPS1P31327 1500 aa11.2□□□□□ -0.62
RAPGEF4-209ENST00000473043 TMEM2Q9UHN6 1383 aa11.19□□□□□ -0.62
RAPGEF4-209ENST00000473043 LTKP29376 864 aa11.19□□□□□ -0.62
RAPGEF4-209ENST00000473043 IDI1Q13907 227 aa11.19□□□□□ -0.62
RAPGEF4-209ENST00000473043 ALKQ9UM73 1620 aa11.19□□□□□ -0.62
RAPGEF4-209ENST00000473043 ITGAEP38570 1179 aa11.17□□□□□ -0.62
RAPGEF4-209ENST00000473043 ZFYVE9O95405 1425 aa11.17□□□□□ -0.62
RAPGEF4-209ENST00000473043 NAIPQ13075 1403 aa11.17□□□□□ -0.62
RAPGEF4-209ENST00000473043 TMEM131LA2VDJ0 1609 aa11.17□□□□□ -0.62
RAPGEF4-209ENST00000473043 MYO5BQ9ULV0 1848 aa11.16□□□□□ -0.62
RAPGEF4-209ENST00000473043 LRRC7Q96NW7 1537 aa11.15□□□□□ -0.62
RAPGEF4-209ENST00000473043 PDIA6Q15084 440 aa11.15□□□□□ -0.62
RAPGEF4-209ENST00000473043 DPYSL4O14531 572 aa11.14□□□□□ -0.63
RAPGEF4-209ENST00000473043 TXNDC2Q86VQ3 553 aa11.14□□□□□ -0.63
RAPGEF4-209ENST00000473043 NUP155O75694 1391 aa11.14□□□□□ -0.63
RAPGEF4-209ENST00000473043 MINK1Q8N4C8 1332 aaPredicted RBP11.13□□□□□ -0.63
RAPGEF4-209ENST00000473043 HFM1A2PYH4 1435 aa11.13□□□□□ -0.63
RAPGEF4-209ENST00000473043 CD44P16070 742 aaKnown RBP11.13□□□□□ -0.63
RAPGEF4-209ENST00000473043 DDRGK1Q96HY6 314 aa11.13□□□□□ -0.63
RAPGEF4-209ENST00000473043 SLC52A1Q9NWF4 448 aa11.13□□□□□ -0.63
RAPGEF4-209ENST00000473043 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.12□□□□□ -0.63
RAPGEF4-209ENST00000473043 SPHKAPQ2M3C7 1700 aa11.12□□□□□ -0.63
RAPGEF4-209ENST00000473043 XIRP1Q702N8 1843 aaKnown RBP11.12□□□□□ -0.63
RAPGEF4-209ENST00000473043 NWD1Q149M9 1564 aa11.11□□□□□ -0.63
RAPGEF4-209ENST00000473043 UBAP1LF5GYI3 381 aa11.11□□□□□ -0.63
RAPGEF4-209ENST00000473043 TMC2Q8TDI7 906 aa11.11□□□□□ -0.63
RAPGEF4-209ENST00000473043 RIMS2Q9UQ26 1411 aa11.1□□□□□ -0.63
RAPGEF4-209ENST00000473043 PHF12Q96QT6 1004 aa11.1□□□□□ -0.63
RAPGEF4-209ENST00000473043 PLEKHG1Q9ULL1 1385 aa11.09□□□□□ -0.63
RAPGEF4-209ENST00000473043 EID1Q9Y6B2 187 aa11.09□□□□□ -0.63
RAPGEF4-209ENST00000473043 CLTCL1P53675 1640 aa11.09□□□□□ -0.63
RAPGEF4-209ENST00000473043 TRPM2O94759 1503 aa11.09□□□□□ -0.63
RAPGEF4-209ENST00000473043 ZNF316A6NFI3 1004 aaPredicted RBP11.08□□□□□ -0.64
RAPGEF4-209ENST00000473043 FLIIQ13045 1269 aa11.08□□□□□ -0.64
RAPGEF4-209ENST00000473043 ADAMTS13Q76LX8 1427 aa11.08□□□□□ -0.64
RAPGEF4-209ENST00000473043 EMILIN3Q9NT22 766 aa11.07□□□□□ -0.64
RAPGEF4-209ENST00000473043 PODXL2Q9NZ53 605 aa11.07□□□□□ -0.64
RAPGEF4-209ENST00000473043 NKTRP30414 1462 aaKnown RBP11.06□□□□□ -0.64
RAPGEF4-209ENST00000473043 NRXN3Q9Y4C0 1643 aa11.06□□□□□ -0.64
RAPGEF4-209ENST00000473043 TIE1P35590 1138 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms