RNA–Protein interactions for RNA: ENST00000472789.1

SMARCD3-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 2

Gene SMARCD3, Length 863 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-208ENST00000472789 NCOA3Q9Y6Q9 1424 aa15□□□□□ -0.01
SMARCD3-208ENST00000472789 ADGRB1O14514 1584 aa15□□□□□ -0.01
SMARCD3-208ENST00000472789 NBPF8Q3BBV2 869 aa15□□□□□ -0.01
SMARCD3-208ENST00000472789 TECPR2O15040 1411 aa15□□□□□ -0.01
SMARCD3-208ENST00000472789 ROCK2O75116 1388 aaKnown RBP14.99□□□□□ -0.01
SMARCD3-208ENST00000472789 PLEKHH1Q9ULM0 1364 aa14.99□□□□□ -0.01
SMARCD3-208ENST00000472789 CADPS2Q86UW7 1296 aa14.99□□□□□ -0.01
SMARCD3-208ENST00000472789 SRCAPQ6ZRS2 3230 aa14.99□□□□□ -0.01
SMARCD3-208ENST00000472789 ADGRL3Q9HAR2 1447 aa14.99□□□□□ -0.01
SMARCD3-208ENST00000472789 KNDC1Q76NI1 1749 aa14.97□□□□□ -0.01
SMARCD3-208ENST00000472789 KIAA1210Q9ULL0 1709 aa14.97□□□□□ -0.01
SMARCD3-208ENST00000472789 SIRT1Q96EB6 747 aa14.96□□□□□ -0.01
SMARCD3-208ENST00000472789 SLAIN2Q9P270 581 aa14.96□□□□□ -0.01
SMARCD3-208ENST00000472789 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.95□□□□□ -0.02
SMARCD3-208ENST00000472789 CARD11Q9BXL7 1154 aa14.95□□□□□ -0.02
SMARCD3-208ENST00000472789 MINK1Q8N4C8 1332 aaPredicted RBP14.94□□□□□ -0.02
SMARCD3-208ENST00000472789 DLC1Q96QB1 1528 aa14.94□□□□□ -0.02
SMARCD3-208ENST00000472789 HIRIP3Q9BW71 556 aaPredicted RBP14.94□□□□□ -0.02
SMARCD3-208ENST00000472789 TRPM1Q7Z4N2 1603 aa14.94□□□□□ -0.02
SMARCD3-208ENST00000472789 NALCNQ8IZF0 1738 aa14.94□□□□□ -0.02
SMARCD3-208ENST00000472789 DCCP43146 1447 aa14.93□□□□□ -0.02
SMARCD3-208ENST00000472789 NUTM2FA1L443 756 aa14.93□□□□□ -0.02
SMARCD3-208ENST00000472789 PHLPP1O60346 1717 aa14.92□□□□□ -0.02
SMARCD3-208ENST00000472789 RALGAPBQ86X10 1494 aa14.91□□□□□ -0.02
SMARCD3-208ENST00000472789 CENPJQ9HC77 1338 aaPredicted RBP14.91□□□□□ -0.02
SMARCD3-208ENST00000472789 ARHGEF28Q8N1W1 1705 aaKnown RBP14.89□□□□□ -0.03
SMARCD3-208ENST00000472789 EIF3AQ14152 1382 aaKnown RBP14.89□□□□□ -0.03
SMARCD3-208ENST00000472789 JCADQ9P266 1359 aa14.89□□□□□ -0.03
SMARCD3-208ENST00000472789 MST1RQ04912 1400 aa14.89□□□□□ -0.03
SMARCD3-208ENST00000472789 GPRASP1Q5JY77 1395 aa14.88□□□□□ -0.03
SMARCD3-208ENST00000472789 CDC42BPGQ6DT37 1551 aa14.88□□□□□ -0.03
SMARCD3-208ENST00000472789 COL16A1Q07092 1604 aaPredicted RBP14.88□□□□□ -0.03
SMARCD3-208ENST00000472789 ESCO1Q5FWF5 840 aa14.87□□□□□ -0.03
SMARCD3-208ENST00000472789 C1orf167Q5SNV9 1468 aa14.87□□□□□ -0.03
SMARCD3-208ENST00000472789 LRP6O75581 1613 aa14.86□□□□□ -0.03
SMARCD3-208ENST00000472789 BRINP3Q76B58 766 aa14.86□□□□□ -0.03
SMARCD3-208ENST00000472789 ORAI2Q96SN7 254 aa14.86□□□□□ -0.03
SMARCD3-208ENST00000472789 WASLO00401 505 aaPredicted RBP14.85□□□□□ -0.03
SMARCD3-208ENST00000472789 CDK19Q9BWU1 502 aa14.84□□□□□ -0.03
SMARCD3-208ENST00000472789 SRPK2P78362 688 aaKnown RBP14.83□□□□□ -0.04
SMARCD3-208ENST00000472789 DDX17Q92841 729 aaKnown RBP14.83□□□□□ -0.04
SMARCD3-208ENST00000472789 ADGRB2O60241 1585 aa14.82□□□□□ -0.04
SMARCD3-208ENST00000472789 QRICH2Q9H0J4 1663 aa14.82□□□□□ -0.04
SMARCD3-208ENST00000472789 FMN2Q9NZ56 1722 aa14.82□□□□□ -0.04
SMARCD3-208ENST00000472789 UPF1Q92900 1129 aaKnown RBP eCLIP14.81□□□□□ -0.04
SMARCD3-208ENST00000472789 SPATA31A6Q5VVP1 1343 aa14.81□□□□□ -0.04
SMARCD3-208ENST00000472789 USP47Q96K76 1375 aa14.81□□□□□ -0.04
SMARCD3-208ENST00000472789 ST20-MTHFSA0A0A6YYL1 179 aa14.8□□□□□ -0.04
SMARCD3-208ENST00000472789 FOXO3O43524 673 aa14.8□□□□□ -0.04
SMARCD3-208ENST00000472789 PMFBP1Q8TBY8 1022 aa14.8□□□□□ -0.04
SMARCD3-208ENST00000472789 CABP2Q9NPB3 220 aa14.8□□□□□ -0.04
SMARCD3-208ENST00000472789 PHF8Q9UPP1 1060 aa14.8□□□□□ -0.04
SMARCD3-208ENST00000472789 EVC2Q86UK5 1308 aa14.8□□□□□ -0.04
SMARCD3-208ENST00000472789 XPCQ01831 940 aaPredicted RBP14.79□□□□□ -0.04
SMARCD3-208ENST00000472789 AHDC1Q5TGY3 1603 aaPredicted RBP14.79□□□□□ -0.04
SMARCD3-208ENST00000472789 ANKARQ7Z5J8 1434 aa14.79□□□□□ -0.04
SMARCD3-208ENST00000472789 NUDT16Q96DE0 195 aaKnown RBP14.79□□□□□ -0.04
SMARCD3-208ENST00000472789 SHPRHQ149N8 1683 aa14.78□□□□□ -0.04
SMARCD3-208ENST00000472789 TULP4Q9NRJ4 1543 aa14.78□□□□□ -0.04
SMARCD3-208ENST00000472789 PRR36Q9H6K5 1346 aa14.78□□□□□ -0.04
SMARCD3-208ENST00000472789 ZNF772Q68DY9 489 aaPredicted RBP14.78□□□□□ -0.04
SMARCD3-208ENST00000472789 NPHP3Q7Z494 1330 aa14.77□□□□□ -0.04
SMARCD3-208ENST00000472789 ZNF316A6NFI3 1004 aaPredicted RBP14.77□□□□□ -0.05
SMARCD3-208ENST00000472789 MEX3CQ5U5Q3 659 aaKnown RBP14.77□□□□□ -0.05
SMARCD3-208ENST00000472789 NGDNQ8NEJ9 315 aaKnown RBP14.76□□□□□ -0.05
SMARCD3-208ENST00000472789 RGPD8O14715 1765 aaPredicted RBP14.75□□□□□ -0.05
SMARCD3-208ENST00000472789 PSME1Q06323 249 aa14.75□□□□□ -0.05
SMARCD3-208ENST00000472789 CCDC61Q9Y6R9 512 aa14.75□□□□□ -0.05
SMARCD3-208ENST00000472789 USP32Q8NFA0 1604 aa14.74□□□□□ -0.05
SMARCD3-208ENST00000472789 EIF4G2P78344 907 aaKnown RBP eCLIP14.74□□□□□ -0.05
SMARCD3-208ENST00000472789 LRRC59Q96AG4 307 aaKnown RBP14.74□□□□□ -0.05
SMARCD3-208ENST00000472789 ATP7BP35670 1465 aa14.74□□□□□ -0.05
SMARCD3-208ENST00000472789 SBNO2Q9Y2G9 1366 aa14.73□□□□□ -0.05
SMARCD3-208ENST00000472789 KRT28Q7Z3Y7 464 aa14.73□□□□□ -0.05
SMARCD3-208ENST00000472789 EP400Q96L91 3159 aa14.73□□□□□ -0.05
SMARCD3-208ENST00000472789 KIF1AQ12756 1690 aa14.73□□□□□ -0.05
SMARCD3-208ENST00000472789 NHSL1Q5SYE7 1610 aa14.73□□□□□ -0.05
SMARCD3-208ENST00000472789 HSPA5P11021 654 aaKnown RBP14.72□□□□□ -0.05
SMARCD3-208ENST00000472789 RXRBP28702 533 aa14.72□□□□□ -0.05
SMARCD3-208ENST00000472789 TMF1P82094 1093 aa14.72□□□□□ -0.05
SMARCD3-208ENST00000472789 LMOD2Q6P5Q4 547 aa14.72□□□□□ -0.05
SMARCD3-208ENST00000472789 TMC1Q8TDI8 760 aa14.72□□□□□ -0.05
SMARCD3-208ENST00000472789 TESK2Q96S53 571 aa14.72□□□□□ -0.05
SMARCD3-208ENST00000472789 PPIP5K1Q6PFW1 1433 aa14.72□□□□□ -0.05
SMARCD3-208ENST00000472789 SOS2Q07890 1332 aaPredicted RBP14.71□□□□□ -0.05
SMARCD3-208ENST00000472789 NUTM2BA6NNL0 878 aaPredicted RBP14.71□□□□□ -0.05
SMARCD3-208ENST00000472789 NUTM2EB1AL46 878 aaPredicted RBP14.71□□□□□ -0.05
SMARCD3-208ENST00000472789 SLC24A1O60721 1099 aa14.71□□□□□ -0.05
SMARCD3-208ENST00000472789 PLEKHG5O94827 1062 aa14.71□□□□□ -0.05
SMARCD3-208ENST00000472789 NUTM2AQ8IVF1 878 aaPredicted RBP14.71□□□□□ -0.05
SMARCD3-208ENST00000472789 CABP1Q9NZU7 370 aa14.71□□□□□ -0.05
SMARCD3-208ENST00000472789 CDK12Q9NYV4 1490 aaPredicted RBP14.7□□□□□ -0.06
SMARCD3-208ENST00000472789 ITSN1Q15811 1721 aa14.7□□□□□ -0.06
SMARCD3-208ENST00000472789 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
SMARCD3-208ENST00000472789 POLR3GLQ9BT43 218 aa14.7□□□□□ -0.06
SMARCD3-208ENST00000472789 ATAD2Q6PL18 1390 aa14.7□□□□□ -0.06
SMARCD3-208ENST00000472789 ACEP12821 1306 aa14.69□□□□□ -0.06
SMARCD3-208ENST00000472789 AFF2P51816 1311 aa14.69□□□□□ -0.06
SMARCD3-208ENST00000472789 PXDNQ92626 1479 aa14.69□□□□□ -0.06
SMARCD3-208ENST00000472789 PLEKHG3A1L390 1219 aa14.68□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms