RNA–Protein interactions for RNA: ENST00000472638.1

UBQLN4-203, Transcript of ubiquilin 4, humanhuman

TSL 5

Gene UBQLN4, Length 654 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-203ENST00000472638 LAMC1P11047 1609 aa28.94■■■□□ 2.22
UBQLN4-203ENST00000472638 KNDC1Q76NI1 1749 aa28.93■■■□□ 2.22
UBQLN4-203ENST00000472638 NUTM2FA1L443 756 aa28.91■■■□□ 2.22
UBQLN4-203ENST00000472638 RGS17Q9UGC6 210 aaPredicted RBP28.91■■■□□ 2.22
UBQLN4-203ENST00000472638 CDC42BPGQ6DT37 1551 aa28.89■■■□□ 2.22
UBQLN4-203ENST00000472638 SOCS7O14512 581 aa28.89■■■□□ 2.22
UBQLN4-203ENST00000472638 SAFB2Q14151 953 aaKnown RBP eCLIP28.89■■■□□ 2.22
UBQLN4-203ENST00000472638 NHSL1Q5SYE7 1610 aa28.89■■■□□ 2.22
UBQLN4-203ENST00000472638 SIRT1Q96EB6 747 aa28.88■■■□□ 2.21
UBQLN4-203ENST00000472638 PRAM1Q96QH2 718 aa28.88■■■□□ 2.21
UBQLN4-203ENST00000472638 ESCO1Q5FWF5 840 aa28.87■■■□□ 2.21
UBQLN4-203ENST00000472638 SPATA31A6Q5VVP1 1343 aa28.87■■■□□ 2.21
UBQLN4-203ENST00000472638 STAC3Q96MF2 364 aa28.86■■■□□ 2.21
UBQLN4-203ENST00000472638 LRP6O75581 1613 aa28.85■■■□□ 2.21
UBQLN4-203ENST00000472638 NUTM2BA6NNL0 878 aaPredicted RBP28.85■■■□□ 2.21
UBQLN4-203ENST00000472638 NUTM2EB1AL46 878 aaPredicted RBP28.85■■■□□ 2.21
UBQLN4-203ENST00000472638 NUTM2AQ8IVF1 878 aaPredicted RBP28.85■■■□□ 2.21
UBQLN4-203ENST00000472638 LRRC59Q96AG4 307 aaKnown RBP28.85■■■□□ 2.21
UBQLN4-203ENST00000472638 TRAK1Q9UPV9 953 aa28.85■■■□□ 2.21
UBQLN4-203ENST00000472638 ADGRB1O14514 1584 aa28.84■■■□□ 2.21
UBQLN4-203ENST00000472638 POGKQ9P215 609 aa28.84■■■□□ 2.21
UBQLN4-203ENST00000472638 SHPRHQ149N8 1683 aa28.83■■■□□ 2.21
UBQLN4-203ENST00000472638 MEX3CQ5U5Q3 659 aaKnown RBP28.83■■■□□ 2.21
UBQLN4-203ENST00000472638 SOS2Q07890 1332 aaPredicted RBP28.78■■■□□ 2.2
UBQLN4-203ENST00000472638 POTEAQ6S8J7 498 aa28.78■■■□□ 2.2
UBQLN4-203ENST00000472638 DLC1Q96QB1 1528 aa28.78■■■□□ 2.2
UBQLN4-203ENST00000472638 PNPLA6Q8IY17 1366 aa28.77■■■□□ 2.2
UBQLN4-203ENST00000472638 SIN3AQ96ST3 1273 aa28.77■■■□□ 2.2
UBQLN4-203ENST00000472638 FOXO3O43524 673 aa28.76■■■□□ 2.19
UBQLN4-203ENST00000472638 XPCQ01831 940 aaPredicted RBP28.76■■■□□ 2.19
UBQLN4-203ENST00000472638 FMN2Q9NZ56 1722 aa28.75■■■□□ 2.19
UBQLN4-203ENST00000472638 NPHP3Q7Z494 1330 aa28.74■■■□□ 2.19
UBQLN4-203ENST00000472638 HIRIP3Q9BW71 556 aaPredicted RBP28.74■■■□□ 2.19
UBQLN4-203ENST00000472638 NEUROD1Q13562 356 aa28.73■■■□□ 2.19
UBQLN4-203ENST00000472638 MINK1Q8N4C8 1332 aaPredicted RBP28.72■■■□□ 2.19
UBQLN4-203ENST00000472638 PXDNQ92626 1479 aa28.68■■■□□ 2.18
UBQLN4-203ENST00000472638 L3MBTL2Q969R5 705 aa28.68■■■□□ 2.18
UBQLN4-203ENST00000472638 NBPF1Q3BBV0 1214 aa28.67■■■□□ 2.18
UBQLN4-203ENST00000472638 PHF8Q9UPP1 1060 aa28.66■■■□□ 2.18
UBQLN4-203ENST00000472638 ADAMTS2O95450 1211 aa28.65■■■□□ 2.18
UBQLN4-203ENST00000472638 C8orf37Q96NL8 207 aa28.64■■■□□ 2.18
UBQLN4-203ENST00000472638 ZNF772Q68DY9 489 aaPredicted RBP28.63■■■□□ 2.17
UBQLN4-203ENST00000472638 ADGRB2O60241 1585 aa28.62■■■□□ 2.17
UBQLN4-203ENST00000472638 KRT28Q7Z3Y7 464 aa28.62■■■□□ 2.17
UBQLN4-203ENST00000472638 AFF2P51816 1311 aa28.62■■■□□ 2.17
UBQLN4-203ENST00000472638 RGPD8O14715 1765 aaPredicted RBP28.62■■■□□ 2.17
UBQLN4-203ENST00000472638 KIF1AQ12756 1690 aa28.61■■■□□ 2.17
UBQLN4-203ENST00000472638 PMFBP1Q8TBY8 1022 aa28.61■■■□□ 2.17
UBQLN4-203ENST00000472638 WASLO00401 505 aaPredicted RBP28.6■■■□□ 2.17
UBQLN4-203ENST00000472638 ARHGEF28Q8N1W1 1705 aaKnown RBP28.6■■■□□ 2.17
UBQLN4-203ENST00000472638 KIAA1210Q9ULL0 1709 aa28.6■■■□□ 2.17
UBQLN4-203ENST00000472638 ANKARQ7Z5J8 1434 aa28.59■■■□□ 2.17
UBQLN4-203ENST00000472638 USP32Q8NFA0 1604 aa28.58■■■□□ 2.17
UBQLN4-203ENST00000472638 PRR36Q9H6K5 1346 aa28.58■■■□□ 2.17
UBQLN4-203ENST00000472638 NGLY1Q96IV0 654 aa28.56■■■□□ 2.16
UBQLN4-203ENST00000472638 SPATA31A3Q5VYP0 1347 aa28.55■■■□□ 2.16
UBQLN4-203ENST00000472638 PSME1Q06323 249 aa28.55■■■□□ 2.16
UBQLN4-203ENST00000472638 COL22A1Q8NFW1 1626 aaPredicted RBP28.54■■■□□ 2.16
UBQLN4-203ENST00000472638 EIF3AQ14152 1382 aaKnown RBP28.54■■■□□ 2.16
UBQLN4-203ENST00000472638 TULP4Q9NRJ4 1543 aa28.53■■■□□ 2.16
UBQLN4-203ENST00000472638 PLEKHG5O94827 1062 aa28.52■■■□□ 2.16
UBQLN4-203ENST00000472638 LMOD2Q6P5Q4 547 aa28.51■■■□□ 2.15
UBQLN4-203ENST00000472638 CDK19Q9BWU1 502 aa28.5■■■□□ 2.15
UBQLN4-203ENST00000472638 RXRBP28702 533 aa28.48■■■□□ 2.15
UBQLN4-203ENST00000472638 NUDT16Q96DE0 195 aaKnown RBP28.48■■■□□ 2.15
UBQLN4-203ENST00000472638 TNS3Q68CZ2 1445 aa28.48■■■□□ 2.15
UBQLN4-203ENST00000472638 QTRT2Q9H974 415 aaKnown RBP28.47■■■□□ 2.15
UBQLN4-203ENST00000472638 CENPJQ9HC77 1338 aaPredicted RBP28.46■■■□□ 2.15
UBQLN4-203ENST00000472638 NGDNQ8NEJ9 315 aaKnown RBP28.46■■■□□ 2.15
UBQLN4-203ENST00000472638 CABLES1Q8TDN4 633 aa28.45■■■□□ 2.14
UBQLN4-203ENST00000472638 SBNO1A3KN83 1393 aa28.45■■■□□ 2.14
UBQLN4-203ENST00000472638 NBPF8Q3BBV2 869 aa28.44■■■□□ 2.14
UBQLN4-203ENST00000472638 USP21Q9UK80 565 aa28.44■■■□□ 2.14
UBQLN4-203ENST00000472638 ATP7BP35670 1465 aa28.44■■■□□ 2.14
UBQLN4-203ENST00000472638 TRPM1Q7Z4N2 1603 aa28.43■■■□□ 2.14
UBQLN4-203ENST00000472638 ROCK2O75116 1388 aaKnown RBP28.43■■■□□ 2.14
UBQLN4-203ENST00000472638 GPRASP1Q5JY77 1395 aa28.43■■■□□ 2.14
UBQLN4-203ENST00000472638 HAP1P54257 671 aaPredicted RBP28.43■■■□□ 2.14
UBQLN4-203ENST00000472638 TONSLQ96HA7 1378 aa28.41■■■□□ 2.14
UBQLN4-203ENST00000472638 FNBP4Q8N3X1 1017 aaPredicted RBP28.41■■■□□ 2.14
UBQLN4-203ENST00000472638 ARHGEF10O15013 1369 aa28.39■■■□□ 2.14
UBQLN4-203ENST00000472638 SRPK2P78362 688 aaKnown RBP28.39■■■□□ 2.14
UBQLN4-203ENST00000472638 PAK3O75914 559 aaPredicted RBP28.38■■■□□ 2.13
UBQLN4-203ENST00000472638 RBM6P78332 1123 aaKnown RBP28.38■■■□□ 2.13
UBQLN4-203ENST00000472638 CABP2Q9NPB3 220 aa28.37■■■□□ 2.13
UBQLN4-203ENST00000472638 CCDC61Q9Y6R9 512 aa28.36■■■□□ 2.13
UBQLN4-203ENST00000472638 QRICH2Q9H0J4 1663 aa28.35■■■□□ 2.13
UBQLN4-203ENST00000472638 TRPM3Q9HCF6 1732 aaPredicted RBP28.35■■■□□ 2.13
UBQLN4-203ENST00000472638 TRPC5Q9UL62 973 aaPredicted RBP28.35■■■□□ 2.13
UBQLN4-203ENST00000472638 ITSN1Q15811 1721 aa28.35■■■□□ 2.13
UBQLN4-203ENST00000472638 MARF1Q9Y4F3 1742 aaKnown RBP28.34■■■□□ 2.13
UBQLN4-203ENST00000472638 ACEP12821 1306 aa28.33■■■□□ 2.13
UBQLN4-203ENST00000472638 BCL9LQ86UU0 1499 aa28.32■■■□□ 2.12
UBQLN4-203ENST00000472638 CDK12Q9NYV4 1490 aaPredicted RBP28.31■■■□□ 2.12
UBQLN4-203ENST00000472638 TOPAZ1Q8N9V7 1692 aa28.3■■■□□ 2.12
UBQLN4-203ENST00000472638 RGS12O14924 1447 aa28.3■■■□□ 2.12
UBQLN4-203ENST00000472638 ATRNO75882 1429 aa28.3■■■□□ 2.12
UBQLN4-203ENST00000472638 PLEKHG3A1L390 1219 aa28.3■■■□□ 2.12
UBQLN4-203ENST00000472638 CARD11Q9BXL7 1154 aa28.29■■■□□ 2.12
UBQLN4-203ENST00000472638 ALS2Q96Q42 1657 aa28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 86.4 ms