RNA–Protein interactions for RNA: ENST00000472441.1

TM4SF1-202, Transcript of transmembrane 4 L six family member 1, humanhuman

TSL 2 BASIC

Gene TM4SF1, Length 3,115 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF1-202ENST00000472441 PLEKHG5O94827 1062 aa6.45□□□□□ -1.38
TM4SF1-202ENST00000472441 SBNO2Q9Y2G9 1366 aa6.45□□□□□ -1.38
TM4SF1-202ENST00000472441 NSD3Q9BZ95 1437 aa6.45□□□□□ -1.38
TM4SF1-202ENST00000472441 QRICH2Q9H0J4 1663 aa6.45□□□□□ -1.38
TM4SF1-202ENST00000472441 ERICH6BQ5W0A0 696 aa6.45□□□□□ -1.38
TM4SF1-202ENST00000472441 RCAN3Q9UKA8 241 aa6.45□□□□□ -1.38
TM4SF1-202ENST00000472441 PDE3BQ13370 1112 aa6.45□□□□□ -1.38
TM4SF1-202ENST00000472441 TMEM131LA2VDJ0 1609 aa6.44□□□□□ -1.38
TM4SF1-202ENST00000472441 MYO3AQ8NEV4 1616 aa6.44□□□□□ -1.38
TM4SF1-202ENST00000472441 ZMYM3Q14202 1370 aa6.44□□□□□ -1.38
TM4SF1-202ENST00000472441 WAPLQ7Z5K2 1190 aa6.44□□□□□ -1.38
TM4SF1-202ENST00000472441 NPC1L1Q9UHC9 1359 aa6.44□□□□□ -1.38
TM4SF1-202ENST00000472441 APAF1O14727 1248 aa6.43□□□□□ -1.38
TM4SF1-202ENST00000472441 CEBPAP49715 358 aaPredicted RBP6.43□□□□□ -1.38
TM4SF1-202ENST00000472441 CGNL1Q0VF96 1302 aa6.43□□□□□ -1.38
TM4SF1-202ENST00000472441 PLIN1O60240 522 aa6.43□□□□□ -1.38
TM4SF1-202ENST00000472441 NEUROD2Q15784 382 aa6.43□□□□□ -1.38
TM4SF1-202ENST00000472441 CCDC136Q96JN2 1154 aa6.43□□□□□ -1.38
TM4SF1-202ENST00000472441 ZFYVE9O95405 1425 aa6.43□□□□□ -1.38
TM4SF1-202ENST00000472441 YTHDC2Q9H6S0 1430 aaKnown RBP6.43□□□□□ -1.38
TM4SF1-202ENST00000472441 MTHFSP49914 203 aa6.43□□□□□ -1.38
TM4SF1-202ENST00000472441 CDK19Q9BWU1 502 aa6.43□□□□□ -1.38
TM4SF1-202ENST00000472441 BLMP54132 1417 aaPredicted RBP6.42□□□□□ -1.38
TM4SF1-202ENST00000472441 RIMS2Q9UQ26 1411 aa6.42□□□□□ -1.38
TM4SF1-202ENST00000472441 RRP1P56182 461 aaKnown RBP6.42□□□□□ -1.38
TM4SF1-202ENST00000472441 GGNBP2Q9H3C7 697 aa6.42□□□□□ -1.38
TM4SF1-202ENST00000472441 NUTM2FA1L443 756 aa6.42□□□□□ -1.38
TM4SF1-202ENST00000472441 ARHGEF28Q8N1W1 1705 aaKnown RBP6.42□□□□□ -1.38
TM4SF1-202ENST00000472441 A2ML1A8K2U0 1454 aa6.42□□□□□ -1.38
TM4SF1-202ENST00000472441 RNF123Q5XPI4 1314 aa6.42□□□□□ -1.38
TM4SF1-202ENST00000472441 TXNDC2Q86VQ3 553 aa6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 CABP1Q9NZU7 370 aa6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 TULP4Q9NRJ4 1543 aa6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 PLEKHH1Q9ULM0 1364 aa6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 GOLGA2Q08379 1002 aa6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 EXOC6Q8TAG9 804 aa6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 ALKQ9UM73 1620 aa6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 TERF2IPQ9NYB0 399 aa6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 RRP7AQ9Y3A4 280 aaKnown RBP6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 ANKRD36BQ8N2N9 1353 aa6.41□□□□□ -1.38
TM4SF1-202ENST00000472441 GOLGB1Q14789 3259 aaKnown RBP6.4□□□□□ -1.38
TM4SF1-202ENST00000472441 HDGFP51858 240 aaKnown RBP6.4□□□□□ -1.38
TM4SF1-202ENST00000472441 HDGFL2Q7Z4V5 671 aaPredicted RBP6.4□□□□□ -1.38
TM4SF1-202ENST00000472441 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.4□□□□□ -1.38
TM4SF1-202ENST00000472441 CFAP53Q96M91 514 aa6.4□□□□□ -1.38
TM4SF1-202ENST00000472441 PUS7Q96PZ0 661 aaKnown RBP6.4□□□□□ -1.38
TM4SF1-202ENST00000472441 RBM19Q9Y4C8 960 aaKnown RBP6.4□□□□□ -1.38
TM4SF1-202ENST00000472441 UBR1Q8IWV7 1749 aa6.4□□□□□ -1.39
TM4SF1-202ENST00000472441 PTPRMP28827 1452 aa6.4□□□□□ -1.39
TM4SF1-202ENST00000472441 A0A1W2PP64 1363 aa6.4□□□□□ -1.39
TM4SF1-202ENST00000472441 INSRP06213 1382 aa6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 TNRQ92752 1358 aa6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 PPM1GO15355 546 aaPredicted RBP6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 U2AF1L5P0DN76 240 aaPredicted RBP6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 U2AF1Q01081 240 aaKnown RBP eCLIP6.39□□□□□ -1.392e-13■□□□□ 10.4
TM4SF1-202ENST00000472441 DUSP27Q5VZP5 1158 aa6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 SPINK5Q9NQ38 1064 aaPredicted RBP6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 POLR3AO14802 1390 aaPredicted RBP6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 METP08581 1390 aa6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 ATAD2Q6PL18 1390 aa6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 U2SURPO15042 1029 aaKnown RBP6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 FYB1O15117 783 aa6.39□□□□□ -1.39
TM4SF1-202ENST00000472441 FBLN1P23142 703 aa6.38□□□□□ -1.39
TM4SF1-202ENST00000472441 SLFN5Q08AF3 891 aa6.38□□□□□ -1.39
TM4SF1-202ENST00000472441 RBM33Q96EV2 1170 aaKnown RBP6.38□□□□□ -1.39
TM4SF1-202ENST00000472441 SLC26A8Q96RN1 970 aa6.38□□□□□ -1.39
TM4SF1-202ENST00000472441 DMRT2Q9Y5R5 561 aa6.38□□□□□ -1.39
TM4SF1-202ENST00000472441 NCKAP5LQ9HCH0 1330 aa6.38□□□□□ -1.39
TM4SF1-202ENST00000472441 TCP11L2Q8N4U5 519 aa6.37□□□□□ -1.39
TM4SF1-202ENST00000472441 RUNDC1Q96C34 613 aa6.37□□□□□ -1.39
TM4SF1-202ENST00000472441 ZNF521Q96K83 1311 aa6.37□□□□□ -1.39
TM4SF1-202ENST00000472441 NLRP1Q9C000 1473 aa6.37□□□□□ -1.39
TM4SF1-202ENST00000472441 LTKP29376 864 aa6.37□□□□□ -1.39
TM4SF1-202ENST00000472441 C20orf194Q5TEA3 1177 aa6.37□□□□□ -1.39
TM4SF1-202ENST00000472441 CRBNQ96SW2 442 aa6.37□□□□□ -1.39
TM4SF1-202ENST00000472441 WASLO00401 505 aaPredicted RBP6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 WWC1Q8IX03 1113 aa6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 CEP170BQ9Y4F5 1589 aaPredicted RBP6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 SRCAPQ6ZRS2 3230 aa6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 EID1Q9Y6B2 187 aa6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 ABCC11Q96J66 1382 aa6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 TMEM2Q9UHN6 1383 aa6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 NINLQ9Y2I6 1382 aa6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 SETD1BQ9UPS6 1966 aaKnown RBP6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 E9PSI1 815 aa6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 SOX12O15370 315 aa6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 NUDT16Q96DE0 195 aaKnown RBP6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 NSD2O96028 1365 aa6.36□□□□□ -1.39
TM4SF1-202ENST00000472441 BCAR3O75815 825 aa6.35□□□□□ -1.39
TM4SF1-202ENST00000472441 SLIT1O75093 1534 aa6.35□□□□□ -1.39
TM4SF1-202ENST00000472441 ZRANB1Q9UGI0 708 aa6.35□□□□□ -1.39
TM4SF1-202ENST00000472441 DIP2AQ14689 1571 aa6.34□□□□□ -1.39
TM4SF1-202ENST00000472441 CD163L1Q9NR16 1453 aa6.34□□□□□ -1.39
TM4SF1-202ENST00000472441 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.34□□□□□ -1.39
TM4SF1-202ENST00000472441 SETD1AO15047 1707 aaKnown RBP6.34□□□□□ -1.39
TM4SF1-202ENST00000472441 NME9Q86XW9 330 aa6.34□□□□□ -1.39
TM4SF1-202ENST00000472441 PPIP5K1Q6PFW1 1433 aa6.34□□□□□ -1.39
TM4SF1-202ENST00000472441 DIAPH1O60610 1272 aaKnown RBP6.34□□□□□ -1.4
TM4SF1-202ENST00000472441 TRMT2AQ8IZ69 625 aaKnown RBP6.34□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms