RNA–Protein interactions for RNA: ENST00000472170.1

TSPAN1-205, Transcript of tetraspanin 1, humanhuman

TSL 3

Gene TSPAN1, Length 519 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-205ENST00000472170 NEUROD1Q13562 356 aa12.03□□□□□ -0.48
TSPAN1-205ENST00000472170 NUTM2AQ8IVF1 878 aaPredicted RBP12.03□□□□□ -0.48
TSPAN1-205ENST00000472170 PRAM1Q96QH2 718 aa12.03□□□□□ -0.48
TSPAN1-205ENST00000472170 TRAK1Q9UPV9 953 aa12.03□□□□□ -0.48
TSPAN1-205ENST00000472170 NPHP3Q7Z494 1330 aa12.03□□□□□ -0.48
TSPAN1-205ENST00000472170 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
TSPAN1-205ENST00000472170 C1orf167Q5SNV9 1468 aa12.02□□□□□ -0.48
TSPAN1-205ENST00000472170 NUTM2FA1L443 756 aa12.02□□□□□ -0.49
TSPAN1-205ENST00000472170 PSME1Q06323 249 aa12.02□□□□□ -0.49
TSPAN1-205ENST00000472170 SAFB2Q14151 953 aaKnown RBP eCLIP12.02□□□□□ -0.49
TSPAN1-205ENST00000472170 ZNF772Q68DY9 489 aaPredicted RBP12.02□□□□□ -0.49
TSPAN1-205ENST00000472170 ORAI2Q96SN7 254 aa12.02□□□□□ -0.49
TSPAN1-205ENST00000472170 TECPR2O15040 1411 aa12.02□□□□□ -0.49
TSPAN1-205ENST00000472170 NRXN1Q9ULB1 1477 aa12.01□□□□□ -0.49
TSPAN1-205ENST00000472170 ASXL1Q8IXJ9 1541 aa12.01□□□□□ -0.49
TSPAN1-205ENST00000472170 AHDC1Q5TGY3 1603 aaPredicted RBP12□□□□□ -0.49
TSPAN1-205ENST00000472170 NALCNQ8IZF0 1738 aa12□□□□□ -0.49
TSPAN1-205ENST00000472170 FOXO3O43524 673 aa12□□□□□ -0.49
TSPAN1-205ENST00000472170 POTEAQ6S8J7 498 aa12□□□□□ -0.49
TSPAN1-205ENST00000472170 EIF3AQ14152 1382 aaKnown RBP12□□□□□ -0.49
TSPAN1-205ENST00000472170 KNDC1Q76NI1 1749 aa11.98□□□□□ -0.49
TSPAN1-205ENST00000472170 HAP1P54257 671 aaPredicted RBP11.98□□□□□ -0.49
TSPAN1-205ENST00000472170 DDX17Q92841 729 aaKnown RBP11.98□□□□□ -0.49
TSPAN1-205ENST00000472170 COL16A1Q07092 1604 aaPredicted RBP11.97□□□□□ -0.49
TSPAN1-205ENST00000472170 SOS2Q07890 1332 aaPredicted RBP11.97□□□□□ -0.49
TSPAN1-205ENST00000472170 NGLY1Q96IV0 654 aa11.97□□□□□ -0.49
TSPAN1-205ENST00000472170 PHF8Q9UPP1 1060 aa11.97□□□□□ -0.49
TSPAN1-205ENST00000472170 CDC42BPGQ6DT37 1551 aa11.96□□□□□ -0.49
TSPAN1-205ENST00000472170 PLEKHH1Q9ULM0 1364 aa11.96□□□□□ -0.49
TSPAN1-205ENST00000472170 MINK1Q8N4C8 1332 aaPredicted RBP11.96□□□□□ -0.49
TSPAN1-205ENST00000472170 KRT28Q7Z3Y7 464 aa11.96□□□□□ -0.49
TSPAN1-205ENST00000472170 L3MBTL2Q969R5 705 aa11.96□□□□□ -0.49
TSPAN1-205ENST00000472170 SIN3AQ96ST3 1273 aa11.96□□□□□ -0.49
TSPAN1-205ENST00000472170 DLC1Q96QB1 1528 aa11.96□□□□□ -0.5
TSPAN1-205ENST00000472170 WASLO00401 505 aaPredicted RBP11.95□□□□□ -0.5
TSPAN1-205ENST00000472170 LMOD2Q6P5Q4 547 aa11.95□□□□□ -0.5
TSPAN1-205ENST00000472170 HIRIP3Q9BW71 556 aaPredicted RBP11.95□□□□□ -0.5
TSPAN1-205ENST00000472170 SHPRHQ149N8 1683 aa11.94□□□□□ -0.5
TSPAN1-205ENST00000472170 NHSL1Q5SYE7 1610 aa11.94□□□□□ -0.5
TSPAN1-205ENST00000472170 ADAMTS2O95450 1211 aa11.94□□□□□ -0.5
TSPAN1-205ENST00000472170 NGDNQ8NEJ9 315 aaKnown RBP11.94□□□□□ -0.5
TSPAN1-205ENST00000472170 C8orf37Q96NL8 207 aa11.94□□□□□ -0.5
TSPAN1-205ENST00000472170 GPRASP1Q5JY77 1395 aa11.93□□□□□ -0.5
TSPAN1-205ENST00000472170 RXRBP28702 533 aa11.93□□□□□ -0.5
TSPAN1-205ENST00000472170 XPCQ01831 940 aaPredicted RBP11.93□□□□□ -0.5
TSPAN1-205ENST00000472170 PMFBP1Q8TBY8 1022 aa11.92□□□□□ -0.5
TSPAN1-205ENST00000472170 PNPLA6Q8IY17 1366 aa11.92□□□□□ -0.5
TSPAN1-205ENST00000472170 TONSLQ96HA7 1378 aa11.92□□□□□ -0.5
TSPAN1-205ENST00000472170 CDK19Q9BWU1 502 aa11.91□□□□□ -0.5
TSPAN1-205ENST00000472170 QTRT2Q9H974 415 aaKnown RBP11.91□□□□□ -0.5
TSPAN1-205ENST00000472170 ANKARQ7Z5J8 1434 aa11.91□□□□□ -0.5
TSPAN1-205ENST00000472170 KIAA1210Q9ULL0 1709 aa11.91□□□□□ -0.5
TSPAN1-205ENST00000472170 KIF1AQ12756 1690 aa11.91□□□□□ -0.5
TSPAN1-205ENST00000472170 AFF2P51816 1311 aa11.9□□□□□ -0.5
TSPAN1-205ENST00000472170 ADGRB1O14514 1584 aa11.9□□□□□ -0.5
TSPAN1-205ENST00000472170 PAK3O75914 559 aaPredicted RBP11.9□□□□□ -0.5
TSPAN1-205ENST00000472170 SRPK2P78362 688 aaKnown RBP11.9□□□□□ -0.5
TSPAN1-205ENST00000472170 NBPF1Q3BBV0 1214 aa11.9□□□□□ -0.5
TSPAN1-205ENST00000472170 NUDT16Q96DE0 195 aaKnown RBP11.9□□□□□ -0.5
TSPAN1-205ENST00000472170 FMN2Q9NZ56 1722 aa11.9□□□□□ -0.5
TSPAN1-205ENST00000472170 SPATA31A3Q5VYP0 1347 aa11.89□□□□□ -0.51
TSPAN1-205ENST00000472170 CENPJQ9HC77 1338 aaPredicted RBP11.89□□□□□ -0.51
TSPAN1-205ENST00000472170 USP21Q9UK80 565 aa11.89□□□□□ -0.51
TSPAN1-205ENST00000472170 CCDC61Q9Y6R9 512 aa11.89□□□□□ -0.51
TSPAN1-205ENST00000472170 ROCK2O75116 1388 aaKnown RBP11.89□□□□□ -0.51
TSPAN1-205ENST00000472170 TRPC5Q9UL62 973 aaPredicted RBP11.88□□□□□ -0.51
TSPAN1-205ENST00000472170 ARHGEF10O15013 1369 aa11.88□□□□□ -0.51
TSPAN1-205ENST00000472170 RGPD8O14715 1765 aaPredicted RBP11.87□□□□□ -0.51
TSPAN1-205ENST00000472170 SLC24A1O60721 1099 aa11.87□□□□□ -0.51
TSPAN1-205ENST00000472170 PLEKHG5O94827 1062 aa11.87□□□□□ -0.51
TSPAN1-205ENST00000472170 RBM6P78332 1123 aaKnown RBP11.87□□□□□ -0.51
TSPAN1-205ENST00000472170 SBNO1A3KN83 1393 aa11.87□□□□□ -0.51
TSPAN1-205ENST00000472170 EVC2Q86UK5 1308 aa11.86□□□□□ -0.51
TSPAN1-205ENST00000472170 CARD11Q9BXL7 1154 aa11.86□□□□□ -0.51
TSPAN1-205ENST00000472170 PCGF6Q9BYE7 350 aa11.86□□□□□ -0.51
TSPAN1-205ENST00000472170 LRP6O75581 1613 aa11.86□□□□□ -0.51
TSPAN1-205ENST00000472170 PXDNQ92626 1479 aa11.85□□□□□ -0.51
TSPAN1-205ENST00000472170 TULP4Q9NRJ4 1543 aa11.85□□□□□ -0.51
TSPAN1-205ENST00000472170 ADGRB2O60241 1585 aa11.84□□□□□ -0.51
TSPAN1-205ENST00000472170 FNBP4Q8N3X1 1017 aaPredicted RBP11.84□□□□□ -0.51
TSPAN1-205ENST00000472170 ARHGEF28Q8N1W1 1705 aaKnown RBP11.83□□□□□ -0.52
TSPAN1-205ENST00000472170 NBPF8Q3BBV2 869 aa11.83□□□□□ -0.52
TSPAN1-205ENST00000472170 TNS3Q68CZ2 1445 aa11.83□□□□□ -0.52
TSPAN1-205ENST00000472170 PLEKHG3A1L390 1219 aa11.82□□□□□ -0.52
TSPAN1-205ENST00000472170 UPF1Q92900 1129 aaKnown RBP eCLIP11.82□□□□□ -0.52
TSPAN1-205ENST00000472170 ZNF692Q9BU19 519 aaPredicted RBP11.82□□□□□ -0.52
TSPAN1-205ENST00000472170 CABP2Q9NPB3 220 aa11.82□□□□□ -0.52
TSPAN1-205ENST00000472170 TIMELESSQ9UNS1 1208 aa11.82□□□□□ -0.52
TSPAN1-205ENST00000472170 CCDC9Q9Y3X0 531 aaKnown RBP11.82□□□□□ -0.52
TSPAN1-205ENST00000472170 ITSN1Q15811 1721 aa11.82□□□□□ -0.52
TSPAN1-205ENST00000472170 ACEP12821 1306 aa11.82□□□□□ -0.52
TSPAN1-205ENST00000472170 UNC5CLQ8IV45 518 aa11.81□□□□□ -0.52
TSPAN1-205ENST00000472170 ABTB2Q8N961 1025 aa11.81□□□□□ -0.52
TSPAN1-205ENST00000472170 CABLES1Q8TDN4 633 aa11.81□□□□□ -0.52
TSPAN1-205ENST00000472170 COL22A1Q8NFW1 1626 aaPredicted RBP11.81□□□□□ -0.52
TSPAN1-205ENST00000472170 PRR36Q9H6K5 1346 aa11.81□□□□□ -0.52
TSPAN1-205ENST00000472170 NLRP13Q86W25 1043 aa11.8□□□□□ -0.52
TSPAN1-205ENST00000472170 CLSPNQ9HAW4 1339 aa11.8□□□□□ -0.52
TSPAN1-205ENST00000472170 CCER1Q8TC90 406 aaPredicted RBP11.79□□□□□ -0.52
TSPAN1-205ENST00000472170 GJD4Q96KN9 370 aaPredicted RBP11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms