RNA–Protein interactions for RNA: ENST00000471515.5

CHKB-206, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-206ENST00000471515 COL22A1Q8NFW1 1626 aaPredicted RBP13.02□□□□□ -0.32
CHKB-206ENST00000471515 RGL3Q3MIN7 710 aa13.02□□□□□ -0.33
CHKB-206ENST00000471515 ACIN1Q9UKV3 1341 aaKnown RBP13.02□□□□□ -0.33
CHKB-206ENST00000471515 YTHDC2Q9H6S0 1430 aaKnown RBP13.02□□□□□ -0.33
CHKB-206ENST00000471515 CDK12Q9NYV4 1490 aaPredicted RBP13.01□□□□□ -0.33
CHKB-206ENST00000471515 ADGRB1O14514 1584 aa13□□□□□ -0.33
CHKB-206ENST00000471515 ZNF772Q68DY9 489 aaPredicted RBP13□□□□□ -0.33
CHKB-206ENST00000471515 TMEM132EQ6IEE7 984 aa13□□□□□ -0.33
CHKB-206ENST00000471515 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
CHKB-206ENST00000471515 C14orf93Q9H972 538 aaKnown RBP13□□□□□ -0.33
CHKB-206ENST00000471515 FMN2Q9NZ56 1722 aa12.99□□□□□ -0.33
CHKB-206ENST00000471515 AFF2P51816 1311 aa12.99□□□□□ -0.33
CHKB-206ENST00000471515 SIRT1Q96EB6 747 aa12.99□□□□□ -0.33
CHKB-206ENST00000471515 NUTM2BA6NNL0 878 aaPredicted RBP12.98□□□□□ -0.33
CHKB-206ENST00000471515 NUTM2EB1AL46 878 aaPredicted RBP12.98□□□□□ -0.33
CHKB-206ENST00000471515 NUTM2AQ8IVF1 878 aaPredicted RBP12.98□□□□□ -0.33
CHKB-206ENST00000471515 MEX3CQ5U5Q3 659 aaKnown RBP12.97□□□□□ -0.33
CHKB-206ENST00000471515 DLC1Q96QB1 1528 aa12.97□□□□□ -0.33
CHKB-206ENST00000471515 STK26Q9P289 416 aa12.96□□□□□ -0.33
CHKB-206ENST00000471515 HRCP23327 699 aa12.95□□□□□ -0.34
CHKB-206ENST00000471515 CFAP70Q5T0N1 1121 aa12.95□□□□□ -0.34
CHKB-206ENST00000471515 RGS12O14924 1447 aa12.95□□□□□ -0.34
CHKB-206ENST00000471515 ADGRB2O60241 1585 aa12.94□□□□□ -0.34
CHKB-206ENST00000471515 NPHP3Q7Z494 1330 aa12.94□□□□□ -0.34
CHKB-206ENST00000471515 DHX57Q6P158 1386 aaKnown RBP12.94□□□□□ -0.34
CHKB-206ENST00000471515 KIF1AQ12756 1690 aa12.93□□□□□ -0.34
CHKB-206ENST00000471515 USP32Q8NFA0 1604 aa12.93□□□□□ -0.34
CHKB-206ENST00000471515 RXRBP28702 533 aa12.93□□□□□ -0.34
CHKB-206ENST00000471515 ESCO1Q5FWF5 840 aa12.93□□□□□ -0.34
CHKB-206ENST00000471515 FNBP4Q8N3X1 1017 aaPredicted RBP12.93□□□□□ -0.34
CHKB-206ENST00000471515 FOXO3O43524 673 aa12.92□□□□□ -0.34
CHKB-206ENST00000471515 UPF1Q92900 1129 aaKnown RBP eCLIP12.92□□□□□ -0.34
CHKB-206ENST00000471515 C8orf37Q96NL8 207 aa12.92□□□□□ -0.34
CHKB-206ENST00000471515 BCL9LQ86UU0 1499 aa12.91□□□□□ -0.34
CHKB-206ENST00000471515 ATRNO75882 1429 aa12.91□□□□□ -0.34
CHKB-206ENST00000471515 SPATA31A3Q5VYP0 1347 aa12.9□□□□□ -0.34
CHKB-206ENST00000471515 RGPD8O14715 1765 aaPredicted RBP12.9□□□□□ -0.34
CHKB-206ENST00000471515 ADAMTS2O95450 1211 aa12.9□□□□□ -0.34
CHKB-206ENST00000471515 XPCQ01831 940 aaPredicted RBP12.9□□□□□ -0.34
CHKB-206ENST00000471515 MARF1Q9Y4F3 1742 aaKnown RBP12.9□□□□□ -0.34
CHKB-206ENST00000471515 NUTM2FA1L443 756 aa12.89□□□□□ -0.35
CHKB-206ENST00000471515 RBM6P78332 1123 aaKnown RBP12.89□□□□□ -0.35
CHKB-206ENST00000471515 PRAM1Q96QH2 718 aa12.89□□□□□ -0.35
CHKB-206ENST00000471515 QTRT2Q9H974 415 aaKnown RBP12.89□□□□□ -0.35
CHKB-206ENST00000471515 ANKARQ7Z5J8 1434 aa12.88□□□□□ -0.35
CHKB-206ENST00000471515 SLIT2O94813 1529 aa12.88□□□□□ -0.35
CHKB-206ENST00000471515 EP400Q96L91 3159 aa12.87□□□□□ -0.35
CHKB-206ENST00000471515 NGLY1Q96IV0 654 aa12.87□□□□□ -0.35
CHKB-206ENST00000471515 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.87□□□□□ -0.35
CHKB-206ENST00000471515 TNS3Q68CZ2 1445 aa12.87□□□□□ -0.35
CHKB-206ENST00000471515 SBNO1A3KN83 1393 aa12.86□□□□□ -0.35
CHKB-206ENST00000471515 ABCA3Q99758 1704 aa12.86□□□□□ -0.35
CHKB-206ENST00000471515 TRPM3Q9HCF6 1732 aaPredicted RBP12.86□□□□□ -0.35
CHKB-206ENST00000471515 PRR36Q9H6K5 1346 aa12.86□□□□□ -0.35
CHKB-206ENST00000471515 STAC3Q96MF2 364 aa12.85□□□□□ -0.35
CHKB-206ENST00000471515 USP21Q9UK80 565 aa12.85□□□□□ -0.35
CHKB-206ENST00000471515 PHF8Q9UPP1 1060 aa12.85□□□□□ -0.35
CHKB-206ENST00000471515 ARHGEF28Q8N1W1 1705 aaKnown RBP12.85□□□□□ -0.35
CHKB-206ENST00000471515 TULP4Q9NRJ4 1543 aa12.84□□□□□ -0.35
CHKB-206ENST00000471515 KRT28Q7Z3Y7 464 aa12.84□□□□□ -0.35
CHKB-206ENST00000471515 DCAF11Q8TEB1 546 aa12.84□□□□□ -0.35
CHKB-206ENST00000471515 TRPC5Q9UL62 973 aaPredicted RBP12.84□□□□□ -0.35
CHKB-206ENST00000471515 GLI3P10071 1580 aa12.83□□□□□ -0.36
CHKB-206ENST00000471515 SAFB2Q14151 953 aaKnown RBP eCLIP12.83□□□□□ -0.36
CHKB-206ENST00000471515 ALS2Q96Q42 1657 aa12.83□□□□□ -0.36
CHKB-206ENST00000471515 TRAK1Q9UPV9 953 aa12.82□□□□□ -0.36
CHKB-206ENST00000471515 ATP7BP35670 1465 aa12.82□□□□□ -0.36
CHKB-206ENST00000471515 KDM2AQ9Y2K7 1162 aa12.81□□□□□ -0.36
CHKB-206ENST00000471515 KIAA1210Q9ULL0 1709 aa12.81□□□□□ -0.36
CHKB-206ENST00000471515 CRYBG1Q9Y4K1 1723 aa12.81□□□□□ -0.36
CHKB-206ENST00000471515 RALGAPBQ86X10 1494 aa12.8□□□□□ -0.36
CHKB-206ENST00000471515 HIRIP3Q9BW71 556 aaPredicted RBP12.8□□□□□ -0.36
CHKB-206ENST00000471515 ARHGEF10O15013 1369 aa12.8□□□□□ -0.36
CHKB-206ENST00000471515 WASLO00401 505 aaPredicted RBP12.79□□□□□ -0.36
CHKB-206ENST00000471515 POGKQ9P215 609 aa12.79□□□□□ -0.36
CHKB-206ENST00000471515 MINK1Q8N4C8 1332 aaPredicted RBP12.79□□□□□ -0.36
CHKB-206ENST00000471515 PLCH1Q4KWH8 1693 aa12.79□□□□□ -0.36
CHKB-206ENST00000471515 NWD2Q9ULI1 1742 aa12.79□□□□□ -0.36
CHKB-206ENST00000471515 TOPAZ1Q8N9V7 1692 aa12.78□□□□□ -0.36
CHKB-206ENST00000471515 UNC5CLQ8IV45 518 aa12.78□□□□□ -0.36
CHKB-206ENST00000471515 CABLES1Q8TDN4 633 aa12.78□□□□□ -0.36
CHKB-206ENST00000471515 GJD4Q96KN9 370 aaPredicted RBP12.78□□□□□ -0.36
CHKB-206ENST00000471515 EIF3AQ14152 1382 aaKnown RBP12.78□□□□□ -0.36
CHKB-206ENST00000471515 ATAD2Q6PL18 1390 aa12.78□□□□□ -0.36
CHKB-206ENST00000471515 SRCAPQ6ZRS2 3230 aa12.78□□□□□ -0.36
CHKB-206ENST00000471515 NRAPQ86VF7 1730 aa12.77□□□□□ -0.36
CHKB-206ENST00000471515 PSME1Q06323 249 aa12.77□□□□□ -0.37
CHKB-206ENST00000471515 PMFBP1Q8TBY8 1022 aa12.77□□□□□ -0.37
CHKB-206ENST00000471515 FAM83GA6ND36 823 aa12.75□□□□□ -0.37
CHKB-206ENST00000471515 POLR3AO14802 1390 aaPredicted RBP12.75□□□□□ -0.37
CHKB-206ENST00000471515 ONECUT3O60422 494 aaPredicted RBP12.75□□□□□ -0.37
CHKB-206ENST00000471515 NBPF1Q3BBV0 1214 aa12.75□□□□□ -0.37
CHKB-206ENST00000471515 VPS72Q15906 364 aa12.74□□□□□ -0.37
CHKB-206ENST00000471515 ITSN1Q15811 1721 aa12.74□□□□□ -0.37
CHKB-206ENST00000471515 BRWD3Q6RI45 1802 aa12.73□□□□□ -0.37
CHKB-206ENST00000471515 NUDT16Q96DE0 195 aaKnown RBP12.72□□□□□ -0.37
CHKB-206ENST00000471515 COL14A1Q05707 1796 aaKnown RBP12.71□□□□□ -0.37
CHKB-206ENST00000471515 GPRASP1Q5JY77 1395 aa12.71□□□□□ -0.37
CHKB-206ENST00000471515 PHRF1Q9P1Y6 1649 aaKnown RBP12.7□□□□□ -0.38
CHKB-206ENST00000471515 PLEKHG3A1L390 1219 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms