RNA–Protein interactions for RNA: ENST00000471445.5

SREBF1-210, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 936 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-210ENST00000471445 PLEKHH1Q9ULM0 1364 aa30.78■■■□□ 2.52
SREBF1-210ENST00000471445 ADGRB1O14514 1584 aa30.77■■■□□ 2.52
SREBF1-210ENST00000471445 CFAP70Q5T0N1 1121 aa30.75■■■□□ 2.51
SREBF1-210ENST00000471445 DLC1Q96QB1 1528 aa30.74■■■□□ 2.51
SREBF1-210ENST00000471445 WAPLQ7Z5K2 1190 aa30.73■■■□□ 2.51
SREBF1-210ENST00000471445 DHX57Q6P158 1386 aaKnown RBP30.72■■■□□ 2.51
SREBF1-210ENST00000471445 DDX17Q92841 729 aaKnown RBP30.72■■■□□ 2.51
SREBF1-210ENST00000471445 SIRT1Q96EB6 747 aa30.71■■■□□ 2.51
SREBF1-210ENST00000471445 ORAI2Q96SN7 254 aa30.71■■■□□ 2.51
SREBF1-210ENST00000471445 PNPLA6Q8IY17 1366 aa30.69■■■□□ 2.5
SREBF1-210ENST00000471445 LRRC59Q96AG4 307 aaKnown RBP30.68■■■□□ 2.5
SREBF1-210ENST00000471445 SOS2Q07890 1332 aaPredicted RBP30.67■■■□□ 2.5
SREBF1-210ENST00000471445 KIF1AQ12756 1690 aa30.66■■■□□ 2.5
SREBF1-210ENST00000471445 ADGRB2O60241 1585 aa30.66■■■□□ 2.5
SREBF1-210ENST00000471445 POTEAQ6S8J7 498 aa30.65■■■□□ 2.5
SREBF1-210ENST00000471445 STAC3Q96MF2 364 aa30.65■■■□□ 2.5
SREBF1-210ENST00000471445 DCAF11Q8TEB1 546 aa30.64■■■□□ 2.5
SREBF1-210ENST00000471445 COL22A1Q8NFW1 1626 aaPredicted RBP30.63■■■□□ 2.49
SREBF1-210ENST00000471445 RGPD8O14715 1765 aaPredicted RBP30.63■■■□□ 2.49
SREBF1-210ENST00000471445 PXDNQ92626 1479 aa30.62■■■□□ 2.49
SREBF1-210ENST00000471445 MEX3CQ5U5Q3 659 aaKnown RBP30.6■■■□□ 2.49
SREBF1-210ENST00000471445 ARHGEF28Q8N1W1 1705 aaKnown RBP30.6■■■□□ 2.49
SREBF1-210ENST00000471445 KIAA1210Q9ULL0 1709 aa30.6■■■□□ 2.49
SREBF1-210ENST00000471445 KDM2AQ9Y2K7 1162 aa30.6■■■□□ 2.49
SREBF1-210ENST00000471445 ESCO1Q5FWF5 840 aa30.59■■■□□ 2.49
SREBF1-210ENST00000471445 NPHP3Q7Z494 1330 aa30.58■■■□□ 2.49
SREBF1-210ENST00000471445 PRAM1Q96QH2 718 aa30.57■■■□□ 2.48
SREBF1-210ENST00000471445 NUTM2BA6NNL0 878 aaPredicted RBP30.56■■■□□ 2.48
SREBF1-210ENST00000471445 NUTM2EB1AL46 878 aaPredicted RBP30.56■■■□□ 2.48
SREBF1-210ENST00000471445 NUTM2AQ8IVF1 878 aaPredicted RBP30.56■■■□□ 2.48
SREBF1-210ENST00000471445 USP32Q8NFA0 1604 aa30.55■■■□□ 2.48
SREBF1-210ENST00000471445 NUTM2FA1L443 756 aa30.55■■■□□ 2.48
SREBF1-210ENST00000471445 ZNF772Q68DY9 489 aaPredicted RBP30.51■■■□□ 2.47
SREBF1-210ENST00000471445 SAFB2Q14151 953 aaKnown RBP eCLIP30.5■■■□□ 2.47
SREBF1-210ENST00000471445 TRAK1Q9UPV9 953 aa30.5■■■□□ 2.47
SREBF1-210ENST00000471445 ANKARQ7Z5J8 1434 aa30.49■■■□□ 2.47
SREBF1-210ENST00000471445 POGKQ9P215 609 aa30.49■■■□□ 2.47
SREBF1-210ENST00000471445 MARF1Q9Y4F3 1742 aaKnown RBP30.48■■■□□ 2.47
SREBF1-210ENST00000471445 FOXO3O43524 673 aa30.48■■■□□ 2.47
SREBF1-210ENST00000471445 AFF2P51816 1311 aa30.46■■■□□ 2.47
SREBF1-210ENST00000471445 TULP4Q9NRJ4 1543 aa30.45■■■□□ 2.47
SREBF1-210ENST00000471445 XPCQ01831 940 aaPredicted RBP30.44■■■□□ 2.46
SREBF1-210ENST00000471445 C8orf37Q96NL8 207 aa30.41■■■□□ 2.46
SREBF1-210ENST00000471445 PHF8Q9UPP1 1060 aa30.41■■■□□ 2.46
SREBF1-210ENST00000471445 EIF3AQ14152 1382 aaKnown RBP30.41■■■□□ 2.46
SREBF1-210ENST00000471445 ITSN1Q15811 1721 aa30.39■■■□□ 2.46
SREBF1-210ENST00000471445 MINK1Q8N4C8 1332 aaPredicted RBP30.39■■■□□ 2.46
SREBF1-210ENST00000471445 CDK12Q9NYV4 1490 aaPredicted RBP30.38■■■□□ 2.45
SREBF1-210ENST00000471445 ADAMTS2O95450 1211 aa30.37■■■□□ 2.45
SREBF1-210ENST00000471445 HIRIP3Q9BW71 556 aaPredicted RBP30.37■■■□□ 2.45
SREBF1-210ENST00000471445 SPATA31A3Q5VYP0 1347 aa30.37■■■□□ 2.45
SREBF1-210ENST00000471445 TNS3Q68CZ2 1445 aa30.37■■■□□ 2.45
SREBF1-210ENST00000471445 ABCA3Q99758 1704 aa30.36■■■□□ 2.45
SREBF1-210ENST00000471445 TRPM3Q9HCF6 1732 aaPredicted RBP30.36■■■□□ 2.45
SREBF1-210ENST00000471445 PRR36Q9H6K5 1346 aa30.34■■■□□ 2.45
SREBF1-210ENST00000471445 TRPM1Q7Z4N2 1603 aa30.33■■■□□ 2.45
SREBF1-210ENST00000471445 ATP7BP35670 1465 aa30.33■■■□□ 2.45
SREBF1-210ENST00000471445 WASLO00401 505 aaPredicted RBP30.33■■■□□ 2.45
SREBF1-210ENST00000471445 KRT28Q7Z3Y7 464 aa30.33■■■□□ 2.45
SREBF1-210ENST00000471445 SBNO1A3KN83 1393 aa30.32■■■□□ 2.44
SREBF1-210ENST00000471445 TOPAZ1Q8N9V7 1692 aa30.32■■■□□ 2.44
SREBF1-210ENST00000471445 NGLY1Q96IV0 654 aa30.31■■■□□ 2.44
SREBF1-210ENST00000471445 RXRBP28702 533 aa30.3■■■□□ 2.44
SREBF1-210ENST00000471445 TNKS1BP1Q9C0C2 1729 aaKnown RBP30.3■■■□□ 2.44
SREBF1-210ENST00000471445 ALS2Q96Q42 1657 aa30.3■■■□□ 2.44
SREBF1-210ENST00000471445 NBPF1Q3BBV0 1214 aa30.29■■■□□ 2.44
SREBF1-210ENST00000471445 L3MBTL2Q969R5 705 aa30.29■■■□□ 2.44
SREBF1-210ENST00000471445 SIN3AQ96ST3 1273 aa30.29■■■□□ 2.44
SREBF1-210ENST00000471445 PSME1Q06323 249 aa30.27■■■□□ 2.44
SREBF1-210ENST00000471445 FNBP4Q8N3X1 1017 aaPredicted RBP30.27■■■□□ 2.44
SREBF1-210ENST00000471445 PMFBP1Q8TBY8 1022 aa30.27■■■□□ 2.44
SREBF1-210ENST00000471445 QRICH2Q9H0J4 1663 aa30.27■■■□□ 2.44
SREBF1-210ENST00000471445 RGS12O14924 1447 aa30.25■■■□□ 2.43
SREBF1-210ENST00000471445 ARHGEF10O15013 1369 aa30.24■■■□□ 2.43
SREBF1-210ENST00000471445 ATRNO75882 1429 aa30.23■■■□□ 2.43
SREBF1-210ENST00000471445 QTRT2Q9H974 415 aaKnown RBP30.23■■■□□ 2.43
SREBF1-210ENST00000471445 USP21Q9UK80 565 aa30.23■■■□□ 2.43
SREBF1-210ENST00000471445 CRYBG1Q9Y4K1 1723 aa30.22■■■□□ 2.43
SREBF1-210ENST00000471445 RBM6P78332 1123 aaKnown RBP30.22■■■□□ 2.43
SREBF1-210ENST00000471445 BCL9LQ86UU0 1499 aa30.22■■■□□ 2.43
SREBF1-210ENST00000471445 PLCH1Q4KWH8 1693 aa30.2■■■□□ 2.43
SREBF1-210ENST00000471445 SLIT2O94813 1529 aa30.2■■■□□ 2.42
SREBF1-210ENST00000471445 GPRASP1Q5JY77 1395 aa30.19■■■□□ 2.42
SREBF1-210ENST00000471445 NEUROD1Q13562 356 aa30.18■■■□□ 2.42
SREBF1-210ENST00000471445 TRPC5Q9UL62 973 aaPredicted RBP30.18■■■□□ 2.42
SREBF1-210ENST00000471445 NWD2Q9ULI1 1742 aa30.17■■■□□ 2.42
SREBF1-210ENST00000471445 TRIM26Q12899 539 aaPredicted RBP30.17■■■□□ 2.42
SREBF1-210ENST00000471445 CENPJQ9HC77 1338 aaPredicted RBP30.17■■■□□ 2.42
SREBF1-210ENST00000471445 NUDT16Q96DE0 195 aaKnown RBP30.16■■■□□ 2.42
SREBF1-210ENST00000471445 CDK19Q9BWU1 502 aa30.15■■■□□ 2.42
SREBF1-210ENST00000471445 LMOD2Q6P5Q4 547 aa30.12■■■□□ 2.41
SREBF1-210ENST00000471445 NGDNQ8NEJ9 315 aaKnown RBP30.12■■■□□ 2.41
SREBF1-210ENST00000471445 CABLES1Q8TDN4 633 aa30.12■■■□□ 2.41
SREBF1-210ENST00000471445 POLR3AO14802 1390 aaPredicted RBP30.12■■■□□ 2.41
SREBF1-210ENST00000471445 ROCK2O75116 1388 aaKnown RBP30.1■■■□□ 2.41
SREBF1-210ENST00000471445 GLI3P10071 1580 aa30.09■■■□□ 2.41
SREBF1-210ENST00000471445 HAP1P54257 671 aaPredicted RBP30.09■■■□□ 2.41
SREBF1-210ENST00000471445 NRAPQ86VF7 1730 aa30.09■■■□□ 2.41
SREBF1-210ENST00000471445 PHRF1Q9P1Y6 1649 aaKnown RBP30.09■■■□□ 2.41
SREBF1-210ENST00000471445 CCDC61Q9Y6R9 512 aa30.08■■■□□ 2.41
Retrieved 100 of 20,778 RNA–protein pairs in 65.3 ms