RNA–Protein interactions for RNA: ENST00000471423.1

VPS72-204, Transcript of vacuolar protein sorting 72 homolog, humanhuman

TSL 2

Gene VPS72, Length 568 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS72-204ENST00000471423 SIRT1Q96EB6 747 aa25.43■■□□□ 1.66
VPS72-204ENST00000471423 PRAM1Q96QH2 718 aa25.43■■□□□ 1.66
VPS72-204ENST00000471423 SLAIN2Q9P270 581 aa25.43■■□□□ 1.66
VPS72-204ENST00000471423 ARHGEF28Q8N1W1 1705 aaKnown RBP25.43■■□□□ 1.66
VPS72-204ENST00000471423 NBPF8Q3BBV2 869 aa25.42■■□□□ 1.66
VPS72-204ENST00000471423 CDC42BPGQ6DT37 1551 aa25.42■■□□□ 1.66
VPS72-204ENST00000471423 MST1RQ04912 1400 aa25.4■■□□□ 1.66
VPS72-204ENST00000471423 SAFB2Q14151 953 aaKnown RBP eCLIP25.4■■□□□ 1.66
VPS72-204ENST00000471423 POGKQ9P215 609 aa25.39■■□□□ 1.66
VPS72-204ENST00000471423 ROCK2O75116 1388 aaKnown RBP25.38■■□□□ 1.65
VPS72-204ENST00000471423 HSPA1LP34931 641 aa25.35■■□□□ 1.65
VPS72-204ENST00000471423 RALGAPBQ86X10 1494 aa25.34■■□□□ 1.65
VPS72-204ENST00000471423 C1orf167Q5SNV9 1468 aa25.34■■□□□ 1.65
VPS72-204ENST00000471423 ADGRB2O60241 1585 aa25.33■■□□□ 1.65
VPS72-204ENST00000471423 FMN2Q9NZ56 1722 aa25.32■■□□□ 1.64
VPS72-204ENST00000471423 GPRASP1Q5JY77 1395 aa25.31■■□□□ 1.64
VPS72-204ENST00000471423 BRINP3Q76B58 766 aa25.3■■□□□ 1.64
VPS72-204ENST00000471423 TIMELESSQ9UNS1 1208 aa25.3■■□□□ 1.64
VPS72-204ENST00000471423 MINK1Q8N4C8 1332 aaPredicted RBP25.3■■□□□ 1.64
VPS72-204ENST00000471423 HIRIP3Q9BW71 556 aaPredicted RBP25.29■■□□□ 1.64
VPS72-204ENST00000471423 NUTM2FA1L443 756 aa25.27■■□□□ 1.64
VPS72-204ENST00000471423 PHLPP1O60346 1717 aa25.26■■□□□ 1.63
VPS72-204ENST00000471423 CARD11Q9BXL7 1154 aa25.25■■□□□ 1.63
VPS72-204ENST00000471423 CENPJQ9HC77 1338 aaPredicted RBP25.25■■□□□ 1.63
VPS72-204ENST00000471423 AHDC1Q5TGY3 1603 aaPredicted RBP25.25■■□□□ 1.63
VPS72-204ENST00000471423 QRICH2Q9H0J4 1663 aa25.25■■□□□ 1.63
VPS72-204ENST00000471423 ORAI2Q96SN7 254 aa25.24■■□□□ 1.63
VPS72-204ENST00000471423 NHSL1Q5SYE7 1610 aa25.23■■□□□ 1.63
VPS72-204ENST00000471423 EIF3AQ14152 1382 aaKnown RBP25.22■■□□□ 1.63
VPS72-204ENST00000471423 COL16A1Q07092 1604 aaPredicted RBP25.21■■□□□ 1.63
VPS72-204ENST00000471423 USP32Q8NFA0 1604 aa25.2■■□□□ 1.62
VPS72-204ENST00000471423 WASLO00401 505 aaPredicted RBP25.2■■□□□ 1.62
VPS72-204ENST00000471423 ESCO1Q5FWF5 840 aa25.2■■□□□ 1.62
VPS72-204ENST00000471423 RGPD8O14715 1765 aaPredicted RBP25.19■■□□□ 1.62
VPS72-204ENST00000471423 TULP4Q9NRJ4 1543 aa25.19■■□□□ 1.62
VPS72-204ENST00000471423 DDX17Q92841 729 aaKnown RBP25.18■■□□□ 1.62
VPS72-204ENST00000471423 ANKARQ7Z5J8 1434 aa25.18■■□□□ 1.62
VPS72-204ENST00000471423 KIF1AQ12756 1690 aa25.16■■□□□ 1.62
VPS72-204ENST00000471423 PRR36Q9H6K5 1346 aa25.14■■□□□ 1.62
VPS72-204ENST00000471423 CDK19Q9BWU1 502 aa25.13■■□□□ 1.61
VPS72-204ENST00000471423 ATP7BP35670 1465 aa25.13■■□□□ 1.61
VPS72-204ENST00000471423 PHF8Q9UPP1 1060 aa25.1■■□□□ 1.61
VPS72-204ENST00000471423 NPHP3Q7Z494 1330 aa25.1■■□□□ 1.61
VPS72-204ENST00000471423 ITSN1Q15811 1721 aa25.09■■□□□ 1.61
VPS72-204ENST00000471423 FOXO3O43524 673 aa25.09■■□□□ 1.61
VPS72-204ENST00000471423 PXDNQ92626 1479 aa25.09■■□□□ 1.61
VPS72-204ENST00000471423 TOPAZ1Q8N9V7 1692 aa25.08■■□□□ 1.61
VPS72-204ENST00000471423 NUDT16Q96DE0 195 aaKnown RBP25.08■■□□□ 1.61
VPS72-204ENST00000471423 JCADQ9P266 1359 aa25.07■■□□□ 1.6
VPS72-204ENST00000471423 SBNO2Q9Y2G9 1366 aa25.07■■□□□ 1.6
VPS72-204ENST00000471423 SRPK2P78362 688 aaKnown RBP25.07■■□□□ 1.6
VPS72-204ENST00000471423 SOS2Q07890 1332 aaPredicted RBP25.07■■□□□ 1.6
VPS72-204ENST00000471423 USP47Q96K76 1375 aa25.06■■□□□ 1.6
VPS72-204ENST00000471423 XPCQ01831 940 aaPredicted RBP25.06■■□□□ 1.6
VPS72-204ENST00000471423 PMFBP1Q8TBY8 1022 aa25.06■■□□□ 1.6
VPS72-204ENST00000471423 CABP2Q9NPB3 220 aa25.06■■□□□ 1.6
VPS72-204ENST00000471423 SHPRHQ149N8 1683 aa25.06■■□□□ 1.6
VPS72-204ENST00000471423 EVC2Q86UK5 1308 aa25.05■■□□□ 1.6
VPS72-204ENST00000471423 ST20-MTHFSA0A0A6YYL1 179 aa25.03■■□□□ 1.6
VPS72-204ENST00000471423 LRRC59Q96AG4 307 aaKnown RBP25.03■■□□□ 1.6
VPS72-204ENST00000471423 MED1Q15648 1581 aaPredicted RBP25.02■■□□□ 1.6
VPS72-204ENST00000471423 CCDC61Q9Y6R9 512 aa25■■□□□ 1.59
VPS72-204ENST00000471423 PPIP5K1Q6PFW1 1433 aa24.99■■□□□ 1.59
VPS72-204ENST00000471423 KRT28Q7Z3Y7 464 aa24.99■■□□□ 1.59
VPS72-204ENST00000471423 PNPLA6Q8IY17 1366 aa24.99■■□□□ 1.59
VPS72-204ENST00000471423 NGDNQ8NEJ9 315 aaKnown RBP24.98■■□□□ 1.59
VPS72-204ENST00000471423 TESK2Q96S53 571 aa24.98■■□□□ 1.59
VPS72-204ENST00000471423 PSME1Q06323 249 aa24.97■■□□□ 1.59
VPS72-204ENST00000471423 SPATA31A6Q5VVP1 1343 aa24.95■■□□□ 1.58
VPS72-204ENST00000471423 TRPM3Q9HCF6 1732 aaPredicted RBP24.95■■□□□ 1.58
VPS72-204ENST00000471423 POLR3AO14802 1390 aaPredicted RBP24.94■■□□□ 1.58
VPS72-204ENST00000471423 PLEKHG3A1L390 1219 aa24.94■■□□□ 1.58
VPS72-204ENST00000471423 TNS3Q68CZ2 1445 aa24.94■■□□□ 1.58
VPS72-204ENST00000471423 LRP6O75581 1613 aa24.94■■□□□ 1.58
VPS72-204ENST00000471423 ATAD2Q6PL18 1390 aa24.93■■□□□ 1.58
VPS72-204ENST00000471423 ACEP12821 1306 aa24.93■■□□□ 1.58
VPS72-204ENST00000471423 SPATA31A3Q5VYP0 1347 aa24.93■■□□□ 1.58
VPS72-204ENST00000471423 COL22A1Q8NFW1 1626 aaPredicted RBP24.93■■□□□ 1.58
VPS72-204ENST00000471423 SBNO1A3KN83 1393 aa24.93■■□□□ 1.58
VPS72-204ENST00000471423 CABP1Q9NZU7 370 aa24.91■■□□□ 1.58
VPS72-204ENST00000471423 NUTM2BA6NNL0 878 aaPredicted RBP24.9■■□□□ 1.58
VPS72-204ENST00000471423 NUTM2EB1AL46 878 aaPredicted RBP24.9■■□□□ 1.58
VPS72-204ENST00000471423 NUTM2AQ8IVF1 878 aaPredicted RBP24.9■■□□□ 1.58
VPS72-204ENST00000471423 DISP3Q9P2K9 1392 aa24.9■■□□□ 1.58
VPS72-204ENST00000471423 SLC24A1O60721 1099 aa24.88■■□□□ 1.57
VPS72-204ENST00000471423 ALS2Q96Q42 1657 aa24.88■■□□□ 1.57
VPS72-204ENST00000471423 EIF4G2P78344 907 aaKnown RBP eCLIP24.87■■□□□ 1.57
VPS72-204ENST00000471423 HSPA5P11021 654 aaKnown RBP24.86■■□□□ 1.57
VPS72-204ENST00000471423 TMF1P82094 1093 aa24.86■■□□□ 1.57
VPS72-204ENST00000471423 LMOD2Q6P5Q4 547 aa24.86■■□□□ 1.57
VPS72-204ENST00000471423 ARHGEF10O15013 1369 aa24.85■■□□□ 1.57
VPS72-204ENST00000471423 PAK3O75914 559 aaPredicted RBP24.85■■□□□ 1.57
VPS72-204ENST00000471423 PUS7Q96PZ0 661 aaKnown RBP24.84■■□□□ 1.57
VPS72-204ENST00000471423 MEX3CQ5U5Q3 659 aaKnown RBP24.83■■□□□ 1.57
VPS72-204ENST00000471423 USP6P35125 1406 aa24.83■■□□□ 1.57
VPS72-204ENST00000471423 AKAP12Q02952 1782 aa24.82■■□□□ 1.56
VPS72-204ENST00000471423 PHF23Q9BUL5 403 aaPredicted RBP24.82■■□□□ 1.56
VPS72-204ENST00000471423 TMC1Q8TDI8 760 aa24.81■■□□□ 1.56
VPS72-204ENST00000471423 ABCA3Q99758 1704 aa24.81■■□□□ 1.56
VPS72-204ENST00000471423 CPSF1Q10570 1443 aaKnown RBP24.8■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms