RNA–Protein interactions for RNA: ENST00000470998.1

HDAC8-216, Transcript of histone deacetylase 8, humanhuman

TSL 3

Gene HDAC8, Length 329 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-216ENST00000470998 RAB3GAP2Q9H2M9 1393 aa8.23□□□□□ -1.09
HDAC8-216ENST00000470998 PTPRKQ15262 1439 aa8.23□□□□□ -1.09
HDAC8-216ENST00000470998 NCOA1Q15788 1441 aa8.23□□□□□ -1.09
HDAC8-216ENST00000470998 KIF3CO14782 793 aa8.23□□□□□ -1.09
HDAC8-216ENST00000470998 CRISPLD2Q9H0B8 497 aa8.23□□□□□ -1.09
HDAC8-216ENST00000470998 ADGBQ8N7X0 1667 aa8.23□□□□□ -1.09
HDAC8-216ENST00000470998 ARHGEF5Q12774 1597 aa8.22□□□□□ -1.09
HDAC8-216ENST00000470998 PLA2R1Q13018 1463 aa8.22□□□□□ -1.09
HDAC8-216ENST00000470998 KIF3BO15066 747 aa8.22□□□□□ -1.09
HDAC8-216ENST00000470998 FOXK1P85037 733 aa8.22□□□□□ -1.09
HDAC8-216ENST00000470998 PPP1R15BQ5SWA1 713 aa8.22□□□□□ -1.09
HDAC8-216ENST00000470998 CADPS2Q86UW7 1296 aa8.22□□□□□ -1.09
HDAC8-216ENST00000470998 PLPP6Q8IY26 295 aa8.22□□□□□ -1.09
HDAC8-216ENST00000470998 TSHZ2Q9NRE2 1034 aa8.22□□□□□ -1.09
HDAC8-216ENST00000470998 NCKAP5LQ9HCH0 1330 aa8.22□□□□□ -1.09
HDAC8-216ENST00000470998 DSG2Q14126 1118 aa8.21□□□□□ -1.1
HDAC8-216ENST00000470998 ZNF316A6NFI3 1004 aaPredicted RBP8.2□□□□□ -1.1
HDAC8-216ENST00000470998 FAM50AQ14320 339 aaKnown RBP8.2□□□□□ -1.1
HDAC8-216ENST00000470998 WASHC2CQ9Y4E1 1318 aa8.2□□□□□ -1.1
HDAC8-216ENST00000470998 IQSEC2Q5JU85 1478 aa8.19□□□□□ -1.1
HDAC8-216ENST00000470998 KDM5DQ9BY66 1539 aa8.19□□□□□ -1.1
HDAC8-216ENST00000470998 MAST1Q9Y2H9 1570 aa8.19□□□□□ -1.1
HDAC8-216ENST00000470998 PZPP20742 1482 aa8.19□□□□□ -1.1
HDAC8-216ENST00000470998 STRCQ7RTU9 1775 aa8.18□□□□□ -1.1
HDAC8-216ENST00000470998 ROCK1Q13464 1354 aa8.18□□□□□ -1.1
HDAC8-216ENST00000470998 TNRQ92752 1358 aa8.18□□□□□ -1.1
HDAC8-216ENST00000470998 A2ML1A8K2U0 1454 aa8.18□□□□□ -1.1
HDAC8-216ENST00000470998 CAMSAP1Q5T5Y3 1602 aa8.18□□□□□ -1.1
HDAC8-216ENST00000470998 PTPN23Q9H3S7 1636 aa8.18□□□□□ -1.1
HDAC8-216ENST00000470998 CLTCQ00610 1675 aaKnown RBP8.18□□□□□ -1.1
HDAC8-216ENST00000470998 MFSD10Q14728 455 aa8.17□□□□□ -1.1
HDAC8-216ENST00000470998 ZSWIM6Q9HCJ5 1215 aa8.17□□□□□ -1.1
HDAC8-216ENST00000470998 CEP170BQ9Y4F5 1589 aaPredicted RBP8.17□□□□□ -1.1
HDAC8-216ENST00000470998 TBC1D12O60347 775 aa8.16□□□□□ -1.1
HDAC8-216ENST00000470998 HOXB3P14651 431 aaPredicted RBP8.16□□□□□ -1.1
HDAC8-216ENST00000470998 ZNF142P52746 1687 aaPredicted RBP8.16□□□□□ -1.1
HDAC8-216ENST00000470998 THEMISQ8N1K5 641 aaPredicted RBP8.16□□□□□ -1.1
HDAC8-216ENST00000470998 NLRP1Q9C000 1473 aa8.16□□□□□ -1.1
HDAC8-216ENST00000470998 SHANK2Q9UPX8 1470 aa8.16□□□□□ -1.1
HDAC8-216ENST00000470998 MYO3AQ8NEV4 1616 aa8.15□□□□□ -1.1
HDAC8-216ENST00000470998 NAIPQ13075 1403 aa8.15□□□□□ -1.1
HDAC8-216ENST00000470998 ST18O60284 1047 aa8.15□□□□□ -1.1
HDAC8-216ENST00000470998 FBXO31Q5XUX0 539 aaPredicted RBP8.15□□□□□ -1.1
HDAC8-216ENST00000470998 DIEXFQ68CQ4 756 aaKnown RBP8.15□□□□□ -1.1
HDAC8-216ENST00000470998 UPF1Q92900 1129 aaKnown RBP eCLIP8.15□□□□□ -1.1
HDAC8-216ENST00000470998 LTBP4Q8N2S1 1624 aa8.14□□□□□ -1.11
HDAC8-216ENST00000470998 DUOX2Q9NRD8 1548 aa8.14□□□□□ -1.11
HDAC8-216ENST00000470998 ERBINQ96RT1 1412 aa8.14□□□□□ -1.11
HDAC8-216ENST00000470998 ANKLE2Q86XL3 938 aa8.14□□□□□ -1.11
HDAC8-216ENST00000470998 EIF2AK4Q9P2K8 1649 aaKnown RBP8.14□□□□□ -1.11
HDAC8-216ENST00000470998 ABCC5O15440 1437 aa8.13□□□□□ -1.11
HDAC8-216ENST00000470998 KIF15Q9NS87 1388 aa8.13□□□□□ -1.11
HDAC8-216ENST00000470998 SLC34A2O95436 690 aa8.13□□□□□ -1.11
HDAC8-216ENST00000470998 EMP3P54852 163 aa8.13□□□□□ -1.11
HDAC8-216ENST00000470998 RNF17Q9BXT8 1623 aaKnown RBP8.13□□□□□ -1.11
HDAC8-216ENST00000470998 ARHGAP31Q2M1Z3 1444 aa8.12□□□□□ -1.11
HDAC8-216ENST00000470998 ANKRD30AQ9BXX3 1397 aa8.12□□□□□ -1.11
HDAC8-216ENST00000470998 DNMT1P26358 1616 aaKnown RBP8.12□□□□□ -1.11
HDAC8-216ENST00000470998 ITGAEP38570 1179 aa8.12□□□□□ -1.11
HDAC8-216ENST00000470998 PCDHGA4Q9Y5G9 962 aa8.12□□□□□ -1.11
HDAC8-216ENST00000470998 ABCC3O15438 1527 aa8.12□□□□□ -1.11
HDAC8-216ENST00000470998 DAPK1P53355 1430 aa8.12□□□□□ -1.11
HDAC8-216ENST00000470998 ZC3H13Q5T200 1668 aaKnown RBP8.11□□□□□ -1.11
HDAC8-216ENST00000470998 GCC2Q8IWJ2 1684 aa8.11□□□□□ -1.11
HDAC8-216ENST00000470998 KANK1Q14678 1352 aa8.11□□□□□ -1.11
HDAC8-216ENST00000470998 ZNF335Q9H4Z2 1342 aaPredicted RBP8.11□□□□□ -1.11
HDAC8-216ENST00000470998 SPATA31D1Q6ZQQ2 1576 aa8.11□□□□□ -1.11
HDAC8-216ENST00000470998 HOXB1P14653 301 aaPredicted RBP8.11□□□□□ -1.11
HDAC8-216ENST00000470998 MAP3K9P80192 1104 aa8.11□□□□□ -1.11
HDAC8-216ENST00000470998 ARSIQ5FYB1 569 aa8.11□□□□□ -1.11
HDAC8-216ENST00000470998 RRP7BPQ9NSQ0 103 aa8.11□□□□□ -1.11
HDAC8-216ENST00000470998 MED14O60244 1454 aa8.11□□□□□ -1.11
HDAC8-216ENST00000470998 ADGRL2O95490 1459 aa8.11□□□□□ -1.11
HDAC8-216ENST00000470998 UGGT1Q9NYU2 1555 aa8.1□□□□□ -1.11
HDAC8-216ENST00000470998 E2F4Q16254 413 aa8.1□□□□□ -1.11
HDAC8-216ENST00000470998 MARVELD3Q96A59 401 aa8.1□□□□□ -1.11
HDAC8-216ENST00000470998 ERVK-7P63135 1459 aa8.1□□□□□ -1.11
HDAC8-216ENST00000470998 CPS1P31327 1500 aa8.09□□□□□ -1.11
HDAC8-216ENST00000470998 PTCD2Q8WV60 388 aaKnown RBP8.09□□□□□ -1.11
HDAC8-216ENST00000470998 NPHP4O75161 1426 aaPredicted RBP8.09□□□□□ -1.11
HDAC8-216ENST00000470998 PRDM15P57071 1507 aaPredicted RBP8.08□□□□□ -1.12
HDAC8-216ENST00000470998 LMTK2Q8IWU2 1503 aa8.08□□□□□ -1.12
HDAC8-216ENST00000470998 MROH1Q8NDA8 1641 aa8.08□□□□□ -1.12
HDAC8-216ENST00000470998 CENPBP07199 599 aaPredicted RBP8.08□□□□□ -1.12
HDAC8-216ENST00000470998 NUDT7P0C024 238 aa8.08□□□□□ -1.12
HDAC8-216ENST00000470998 DEPDC5O75140 1603 aa8.07□□□□□ -1.12
HDAC8-216ENST00000470998 ERBB3P21860 1342 aa8.07□□□□□ -1.12
HDAC8-216ENST00000470998 UBAP1LF5GYI3 381 aa8.07□□□□□ -1.12
HDAC8-216ENST00000470998 TOM1O60784 492 aa8.07□□□□□ -1.12
HDAC8-216ENST00000470998 GPR153Q6NV75 609 aa8.07□□□□□ -1.12
HDAC8-216ENST00000470998 VSIG10Q8N0Z9 540 aa8.07□□□□□ -1.12
HDAC8-216ENST00000470998 OXER1Q8TDS5 423 aa8.07□□□□□ -1.12
HDAC8-216ENST00000470998 TONSLQ96HA7 1378 aa8.07□□□□□ -1.12
HDAC8-216ENST00000470998 NEURL4Q96JN8 1562 aa8.06□□□□□ -1.12
HDAC8-216ENST00000470998 POTEMA6NI47 508 aa8.06□□□□□ -1.12
HDAC8-216ENST00000470998 POTEGQ6S5H5 508 aa8.06□□□□□ -1.12
HDAC8-216ENST00000470998 KHSRPQ92945 711 aaKnown RBP eCLIP8.06□□□□□ -1.12
HDAC8-216ENST00000470998 CHIC2Q9UKJ5 165 aa8.06□□□□□ -1.12
HDAC8-216ENST00000470998 EID1Q9Y6B2 187 aa8.06□□□□□ -1.12
HDAC8-216ENST00000470998 CROCC2H7BZ55 1655 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms