RNA–Protein interactions for RNA: ENST00000470585.5

SF3A3-205, Transcript of splicing factor 3a subunit 3, humanhuman

TSL 3

Gene SF3A3, Length 704 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A3-205ENST00000470585 NUP155O75694 1391 aa10.49□□□□□ -0.73
SF3A3-205ENST00000470585 METP08581 1390 aa10.49□□□□□ -0.73
SF3A3-205ENST00000470585 NCBP3Q53F19 620 aaKnown RBP10.48□□□□□ -0.73
SF3A3-205ENST00000470585 HFM1A2PYH4 1435 aa10.48□□□□□ -0.73
SF3A3-205ENST00000470585 USP21Q9UK80 565 aa10.47□□□□□ -0.73
SF3A3-205ENST00000470585 MYOM2P54296 1465 aa10.47□□□□□ -0.73
SF3A3-205ENST00000470585 NEXMIFQ5QGS0 1516 aa10.47□□□□□ -0.73
SF3A3-205ENST00000470585 NPHP3Q7Z494 1330 aa10.46□□□□□ -0.73
SF3A3-205ENST00000470585 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.46□□□□□ -0.74
SF3A3-205ENST00000470585 LRPPRCP42704 1394 aaKnown RBP10.45□□□□□ -0.74
SF3A3-205ENST00000470585 RPGRIP1LQ68CZ1 1315 aa10.45□□□□□ -0.74
SF3A3-205ENST00000470585 LOC105371045A0A1W2PR82 267 aa10.45□□□□□ -0.74
SF3A3-205ENST00000470585 VGFO15240 615 aaPredicted RBP10.45□□□□□ -0.74
SF3A3-205ENST00000470585 CDC42BPGQ6DT37 1551 aa10.44□□□□□ -0.74
SF3A3-205ENST00000470585 BLMP54132 1417 aaPredicted RBP10.44□□□□□ -0.74
SF3A3-205ENST00000470585 MARF1Q9Y4F3 1742 aaKnown RBP10.44□□□□□ -0.74
SF3A3-205ENST00000470585 BCL9LQ86UU0 1499 aa10.43□□□□□ -0.74
SF3A3-205ENST00000470585 KIF1BO60333 1816 aa10.43□□□□□ -0.74
SF3A3-205ENST00000470585 ADAMTS2O95450 1211 aa10.43□□□□□ -0.74
SF3A3-205ENST00000470585 ZNF326Q5BKZ1 582 aaKnown RBP10.43□□□□□ -0.74
SF3A3-205ENST00000470585 LRP5O75197 1615 aa10.42□□□□□ -0.74
SF3A3-205ENST00000470585 ROBO2Q9HCK4 1378 aa10.41□□□□□ -0.74
SF3A3-205ENST00000470585 GJD4Q96KN9 370 aaPredicted RBP10.41□□□□□ -0.74
SF3A3-205ENST00000470585 PXDNQ92626 1479 aa10.41□□□□□ -0.74
SF3A3-205ENST00000470585 CLTCL1P53675 1640 aa10.4□□□□□ -0.74
SF3A3-205ENST00000470585 DDX17Q92841 729 aaKnown RBP10.4□□□□□ -0.74
SF3A3-205ENST00000470585 TECPR2O15040 1411 aa10.4□□□□□ -0.75
SF3A3-205ENST00000470585 SLIT2O94813 1529 aa10.39□□□□□ -0.75
SF3A3-205ENST00000470585 ORAI2Q96SN7 254 aa10.39□□□□□ -0.75
SF3A3-205ENST00000470585 UNC5CLQ8IV45 518 aa10.38□□□□□ -0.75
SF3A3-205ENST00000470585 CCDC144AA2RUR9 1427 aa10.38□□□□□ -0.75
SF3A3-205ENST00000470585 KIF1AQ12756 1690 aa10.38□□□□□ -0.75
SF3A3-205ENST00000470585 SF3B2Q13435 895 aaKnown RBP10.37□□□□□ -0.75
SF3A3-205ENST00000470585 RALGAPBQ86X10 1494 aa10.36□□□□□ -0.75
SF3A3-205ENST00000470585 ONECUT3O60422 494 aaPredicted RBP10.36□□□□□ -0.75
SF3A3-205ENST00000470585 NWD2Q9ULI1 1742 aa10.36□□□□□ -0.75
SF3A3-205ENST00000470585 PPLO60437 1756 aa10.35□□□□□ -0.75
SF3A3-205ENST00000470585 NPM3O75607 178 aaKnown RBP10.35□□□□□ -0.75
SF3A3-205ENST00000470585 ESCO1Q5FWF5 840 aa10.35□□□□□ -0.75
SF3A3-205ENST00000470585 USP32Q8NFA0 1604 aa10.35□□□□□ -0.75
SF3A3-205ENST00000470585 GLI3P10071 1580 aa10.35□□□□□ -0.75
SF3A3-205ENST00000470585 SPATA31A3Q5VYP0 1347 aa10.34□□□□□ -0.75
SF3A3-205ENST00000470585 KNDC1Q76NI1 1749 aa10.34□□□□□ -0.75
SF3A3-205ENST00000470585 VPS72Q15906 364 aa10.34□□□□□ -0.75
SF3A3-205ENST00000470585 POTEHQ6S545 545 aa10.34□□□□□ -0.75
SF3A3-205ENST00000470585 SIRT1Q96EB6 747 aa10.34□□□□□ -0.75
SF3A3-205ENST00000470585 ABCC11Q96J66 1382 aa10.34□□□□□ -0.75
SF3A3-205ENST00000470585 NAIPQ13075 1403 aa10.33□□□□□ -0.76
SF3A3-205ENST00000470585 ANKRD30BQ9BXX2 1392 aa10.33□□□□□ -0.76
SF3A3-205ENST00000470585 ARHGEF10O15013 1369 aa10.32□□□□□ -0.76
SF3A3-205ENST00000470585 FOXO3O43524 673 aa10.32□□□□□ -0.76
SF3A3-205ENST00000470585 DISP2A7MBM2 1401 aa10.32□□□□□ -0.76
SF3A3-205ENST00000470585 BRWD3Q6RI45 1802 aa10.31□□□□□ -0.76
SF3A3-205ENST00000470585 SBNO1A3KN83 1393 aa10.31□□□□□ -0.76
SF3A3-205ENST00000470585 FMN2Q9NZ56 1722 aa10.31□□□□□ -0.76
SF3A3-205ENST00000470585 PSME1Q06323 249 aa10.31□□□□□ -0.76
SF3A3-205ENST00000470585 TNS3Q68CZ2 1445 aa10.31□□□□□ -0.76
SF3A3-205ENST00000470585 BAG6P46379 1132 aa10.3□□□□□ -0.76
SF3A3-205ENST00000470585 RRBP1Q9P2E9 1410 aaKnown RBP10.3□□□□□ -0.76
SF3A3-205ENST00000470585 KRT27Q7Z3Y8 459 aa10.29□□□□□ -0.76
SF3A3-205ENST00000470585 SEPT12Q8IYM1 358 aa10.29□□□□□ -0.76
SF3A3-205ENST00000470585 ACIN1Q9UKV3 1341 aaKnown RBP10.29□□□□□ -0.76
SF3A3-205ENST00000470585 NRXN1Q9ULB1 1477 aa10.28□□□□□ -0.76
SF3A3-205ENST00000470585 PLCH1Q4KWH8 1693 aa10.28□□□□□ -0.76
SF3A3-205ENST00000470585 PIK3C2GO75747 1445 aa10.27□□□□□ -0.77
SF3A3-205ENST00000470585 ANKARQ7Z5J8 1434 aa10.27□□□□□ -0.77
SF3A3-205ENST00000470585 CAPN15O75808 1086 aa10.27□□□□□ -0.77
SF3A3-205ENST00000470585 HRCP23327 699 aa10.27□□□□□ -0.77
SF3A3-205ENST00000470585 KRT28Q7Z3Y7 464 aa10.27□□□□□ -0.77
SF3A3-205ENST00000470585 U3KPZ7 1027 aaPredicted RBP10.27□□□□□ -0.77
SF3A3-205ENST00000470585 RGPD1P0DJD0 1748 aa10.27□□□□□ -0.77
SF3A3-205ENST00000470585 PARD3Q8TEW0 1356 aa10.26□□□□□ -0.77
SF3A3-205ENST00000470585 DEFB132Q7Z7B7 95 aa10.26□□□□□ -0.77
SF3A3-205ENST00000470585 SPINK5Q9NQ38 1064 aaPredicted RBP10.26□□□□□ -0.77
SF3A3-205ENST00000470585 ABCA3Q99758 1704 aa10.26□□□□□ -0.77
SF3A3-205ENST00000470585 IFT172Q9UG01 1749 aa10.26□□□□□ -0.77
SF3A3-205ENST00000470585 SPATA31E1Q6ZUB1 1445 aa10.25□□□□□ -0.77
SF3A3-205ENST00000470585 YTHDC2Q9H6S0 1430 aaKnown RBP10.25□□□□□ -0.77
SF3A3-205ENST00000470585 DSG3P32926 999 aa10.25□□□□□ -0.77
SF3A3-205ENST00000470585 HAP1P54257 671 aaPredicted RBP10.25□□□□□ -0.77
SF3A3-205ENST00000470585 SLC4A1APQ9BWU0 796 aaKnown RBP10.25□□□□□ -0.77
SF3A3-205ENST00000470585 EIF3AQ14152 1382 aaKnown RBP10.25□□□□□ -0.77
SF3A3-205ENST00000470585 ADGRB2O60241 1585 aa10.24□□□□□ -0.77
SF3A3-205ENST00000470585 ITGAEP38570 1179 aa10.24□□□□□ -0.77
SF3A3-205ENST00000470585 XPCQ01831 940 aaPredicted RBP10.24□□□□□ -0.77
SF3A3-205ENST00000470585 PHF8Q9UPP1 1060 aa10.24□□□□□ -0.77
SF3A3-205ENST00000470585 NRAPQ86VF7 1730 aa10.24□□□□□ -0.77
SF3A3-205ENST00000470585 WAPLQ7Z5K2 1190 aa10.23□□□□□ -0.77
SF3A3-205ENST00000470585 ADGRF5Q8IZF2 1346 aa10.23□□□□□ -0.77
SF3A3-205ENST00000470585 COL14A1Q05707 1796 aaKnown RBP10.23□□□□□ -0.77
SF3A3-205ENST00000470585 DLC1Q96QB1 1528 aa10.23□□□□□ -0.77
SF3A3-205ENST00000470585 THSD7AQ9UPZ6 1657 aa10.22□□□□□ -0.77
SF3A3-205ENST00000470585 CCDC9Q9Y3X0 531 aaKnown RBP10.21□□□□□ -0.77
SF3A3-205ENST00000470585 DHX57Q6P158 1386 aaKnown RBP10.21□□□□□ -0.78
SF3A3-205ENST00000470585 FAM83GA6ND36 823 aa10.2□□□□□ -0.78
SF3A3-205ENST00000470585 C11orf95C9JLR9 678 aaPredicted RBP10.2□□□□□ -0.78
SF3A3-205ENST00000470585 SPATA31A5Q5VU36 1347 aa10.2□□□□□ -0.78
SF3A3-205ENST00000470585 SPATA31A7Q8IWB4 1347 aa10.2□□□□□ -0.78
SF3A3-205ENST00000470585 C14orf93Q9H972 538 aaKnown RBP10.2□□□□□ -0.78
SF3A3-205ENST00000470585 STK26Q9P289 416 aa10.2□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms