RNA–Protein interactions for RNA: ENST00000470578.1

PKDCC-203, Transcript of protein kinase domain containing, cytoplasmic, humanhuman

TSL 3

Gene PKDCC, Length 765 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKDCC-203ENST00000470578 NHSL1Q5SYE7 1610 aa23.59■■□□□ 1.37
PKDCC-203ENST00000470578 WAPLQ7Z5K2 1190 aa23.59■■□□□ 1.37
PKDCC-203ENST00000470578 SIN3AQ96ST3 1273 aa23.59■■□□□ 1.37
PKDCC-203ENST00000470578 PHF23Q9BUL5 403 aaPredicted RBP23.58■■□□□ 1.37
PKDCC-203ENST00000470578 ARHGEF28Q8N1W1 1705 aaKnown RBP23.57■■□□□ 1.36
PKDCC-203ENST00000470578 NEUROD1Q13562 356 aa23.57■■□□□ 1.36
PKDCC-203ENST00000470578 C1orf167Q5SNV9 1468 aa23.56■■□□□ 1.36
PKDCC-203ENST00000470578 FMN2Q9NZ56 1722 aa23.56■■□□□ 1.36
PKDCC-203ENST00000470578 BRINP3Q76B58 766 aa23.56■■□□□ 1.36
PKDCC-203ENST00000470578 L3MBTL2Q969R5 705 aa23.52■■□□□ 1.36
PKDCC-203ENST00000470578 SIRT1Q96EB6 747 aa23.52■■□□□ 1.36
PKDCC-203ENST00000470578 PRAM1Q96QH2 718 aa23.52■■□□□ 1.36
PKDCC-203ENST00000470578 SAFB2Q14151 953 aaKnown RBP eCLIP23.51■■□□□ 1.35
PKDCC-203ENST00000470578 TRAK1Q9UPV9 953 aa23.51■■□□□ 1.35
PKDCC-203ENST00000470578 ADGRB2O60241 1585 aa23.51■■□□□ 1.35
PKDCC-203ENST00000470578 POGKQ9P215 609 aa23.5■■□□□ 1.35
PKDCC-203ENST00000470578 TRPM1Q7Z4N2 1603 aa23.49■■□□□ 1.35
PKDCC-203ENST00000470578 SHPRHQ149N8 1683 aa23.49■■□□□ 1.35
PKDCC-203ENST00000470578 PCGF6Q9BYE7 350 aa23.48■■□□□ 1.35
PKDCC-203ENST00000470578 RGPD8O14715 1765 aaPredicted RBP23.47■■□□□ 1.35
PKDCC-203ENST00000470578 RGS17Q9UGC6 210 aaPredicted RBP23.47■■□□□ 1.35
PKDCC-203ENST00000470578 JCADQ9P266 1359 aa23.47■■□□□ 1.35
PKDCC-203ENST00000470578 KIF1AQ12756 1690 aa23.45■■□□□ 1.34
PKDCC-203ENST00000470578 TONSLQ96HA7 1378 aa23.45■■□□□ 1.34
PKDCC-203ENST00000470578 NUTM2FA1L443 756 aa23.45■■□□□ 1.34
PKDCC-203ENST00000470578 ORAI2Q96SN7 254 aa23.44■■□□□ 1.34
PKDCC-203ENST00000470578 ESCO1Q5FWF5 840 aa23.42■■□□□ 1.34
PKDCC-203ENST00000470578 DDX17Q92841 729 aaKnown RBP23.42■■□□□ 1.34
PKDCC-203ENST00000470578 NBPF1Q3BBV0 1214 aa23.41■■□□□ 1.34
PKDCC-203ENST00000470578 USP32Q8NFA0 1604 aa23.41■■□□□ 1.34
PKDCC-203ENST00000470578 MINK1Q8N4C8 1332 aaPredicted RBP23.4■■□□□ 1.34
PKDCC-203ENST00000470578 HIRIP3Q9BW71 556 aaPredicted RBP23.4■■□□□ 1.34
PKDCC-203ENST00000470578 QRICH2Q9H0J4 1663 aa23.39■■□□□ 1.34
PKDCC-203ENST00000470578 TULP4Q9NRJ4 1543 aa23.37■■□□□ 1.33
PKDCC-203ENST00000470578 ROCK2O75116 1388 aaKnown RBP23.37■■□□□ 1.33
PKDCC-203ENST00000470578 EIF3AQ14152 1382 aaKnown RBP23.37■■□□□ 1.33
PKDCC-203ENST00000470578 ITSN1Q15811 1721 aa23.36■■□□□ 1.33
PKDCC-203ENST00000470578 ANKARQ7Z5J8 1434 aa23.36■■□□□ 1.33
PKDCC-203ENST00000470578 NPHP3Q7Z494 1330 aa23.35■■□□□ 1.33
PKDCC-203ENST00000470578 PXDNQ92626 1479 aa23.35■■□□□ 1.33
PKDCC-203ENST00000470578 SPATA31A6Q5VVP1 1343 aa23.34■■□□□ 1.33
PKDCC-203ENST00000470578 LRP6O75581 1613 aa23.34■■□□□ 1.33
PKDCC-203ENST00000470578 POTEAQ6S8J7 498 aa23.34■■□□□ 1.33
PKDCC-203ENST00000470578 LRRC59Q96AG4 307 aaKnown RBP23.34■■□□□ 1.33
PKDCC-203ENST00000470578 SOS2Q07890 1332 aaPredicted RBP23.33■■□□□ 1.33
PKDCC-203ENST00000470578 PNPLA6Q8IY17 1366 aa23.32■■□□□ 1.32
PKDCC-203ENST00000470578 WASLO00401 505 aaPredicted RBP23.31■■□□□ 1.32
PKDCC-203ENST00000470578 FOXO3O43524 673 aa23.31■■□□□ 1.32
PKDCC-203ENST00000470578 RALGAPBQ86X10 1494 aa23.3■■□□□ 1.32
PKDCC-203ENST00000470578 NBPF8Q3BBV2 869 aa23.3■■□□□ 1.32
PKDCC-203ENST00000470578 CENPJQ9HC77 1338 aaPredicted RBP23.3■■□□□ 1.32
PKDCC-203ENST00000470578 COL22A1Q8NFW1 1626 aaPredicted RBP23.3■■□□□ 1.32
PKDCC-203ENST00000470578 XPCQ01831 940 aaPredicted RBP23.29■■□□□ 1.32
PKDCC-203ENST00000470578 PHF8Q9UPP1 1060 aa23.29■■□□□ 1.32
PKDCC-203ENST00000470578 ATP7BP35670 1465 aa23.29■■□□□ 1.32
PKDCC-203ENST00000470578 TOPAZ1Q8N9V7 1692 aa23.28■■□□□ 1.32
PKDCC-203ENST00000470578 MEX3CQ5U5Q3 659 aaKnown RBP23.27■■□□□ 1.32
PKDCC-203ENST00000470578 PRR36Q9H6K5 1346 aa23.27■■□□□ 1.32
PKDCC-203ENST00000470578 GPRASP1Q5JY77 1395 aa23.27■■□□□ 1.31
PKDCC-203ENST00000470578 NUTM2BA6NNL0 878 aaPredicted RBP23.26■■□□□ 1.31
PKDCC-203ENST00000470578 NUTM2EB1AL46 878 aaPredicted RBP23.26■■□□□ 1.31
PKDCC-203ENST00000470578 NUTM2AQ8IVF1 878 aaPredicted RBP23.26■■□□□ 1.31
PKDCC-203ENST00000470578 CLSPNQ9HAW4 1339 aa23.25■■□□□ 1.31
PKDCC-203ENST00000470578 PMFBP1Q8TBY8 1022 aa23.23■■□□□ 1.31
PKDCC-203ENST00000470578 CDK19Q9BWU1 502 aa23.22■■□□□ 1.31
PKDCC-203ENST00000470578 TRPM3Q9HCF6 1732 aaPredicted RBP23.22■■□□□ 1.31
PKDCC-203ENST00000470578 TNS3Q68CZ2 1445 aa23.21■■□□□ 1.31
PKDCC-203ENST00000470578 MARF1Q9Y4F3 1742 aaKnown RBP23.2■■□□□ 1.3
PKDCC-203ENST00000470578 KRT28Q7Z3Y7 464 aa23.2■■□□□ 1.3
PKDCC-203ENST00000470578 CARD11Q9BXL7 1154 aa23.2■■□□□ 1.3
PKDCC-203ENST00000470578 NUDT16Q96DE0 195 aaKnown RBP23.19■■□□□ 1.3
PKDCC-203ENST00000470578 PSME1Q06323 249 aa23.18■■□□□ 1.3
PKDCC-203ENST00000470578 CCER1Q8TC90 406 aaPredicted RBP23.18■■□□□ 1.3
PKDCC-203ENST00000470578 ABCA3Q99758 1704 aa23.17■■□□□ 1.3
PKDCC-203ENST00000470578 SPATA31A3Q5VYP0 1347 aa23.17■■□□□ 1.3
PKDCC-203ENST00000470578 SRPK2P78362 688 aaKnown RBP23.17■■□□□ 1.3
PKDCC-203ENST00000470578 SBNO1A3KN83 1393 aa23.16■■□□□ 1.3
PKDCC-203ENST00000470578 ALS2Q96Q42 1657 aa23.16■■□□□ 1.3
PKDCC-203ENST00000470578 NGDNQ8NEJ9 315 aaKnown RBP23.16■■□□□ 1.3
PKDCC-203ENST00000470578 ZNF772Q68DY9 489 aaPredicted RBP23.15■■□□□ 1.3
PKDCC-203ENST00000470578 EVC2Q86UK5 1308 aa23.13■■□□□ 1.29
PKDCC-203ENST00000470578 ADAMTS2O95450 1211 aa23.13■■□□□ 1.29
PKDCC-203ENST00000470578 C8orf37Q96NL8 207 aa23.13■■□□□ 1.29
PKDCC-203ENST00000470578 CABP2Q9NPB3 220 aa23.13■■□□□ 1.29
PKDCC-203ENST00000470578 PPIP5K1Q6PFW1 1433 aa23.13■■□□□ 1.29
PKDCC-203ENST00000470578 ARHGEF10O15013 1369 aa23.13■■□□□ 1.29
PKDCC-203ENST00000470578 LMOD2Q6P5Q4 547 aa23.12■■□□□ 1.29
PKDCC-203ENST00000470578 CCDC61Q9Y6R9 512 aa23.12■■□□□ 1.29
PKDCC-203ENST00000470578 SBNO2Q9Y2G9 1366 aa23.11■■□□□ 1.29
PKDCC-203ENST00000470578 TIMELESSQ9UNS1 1208 aa23.1■■□□□ 1.29
PKDCC-203ENST00000470578 AFF2P51816 1311 aa23.09■■□□□ 1.29
PKDCC-203ENST00000470578 POLR3AO14802 1390 aaPredicted RBP23.09■■□□□ 1.29
PKDCC-203ENST00000470578 PLEKHG5O94827 1062 aa23.08■■□□□ 1.29
PKDCC-203ENST00000470578 ACEP12821 1306 aa23.08■■□□□ 1.28
PKDCC-203ENST00000470578 CRYBG1Q9Y4K1 1723 aa23.07■■□□□ 1.28
PKDCC-203ENST00000470578 PAK3O75914 559 aaPredicted RBP23.06■■□□□ 1.28
PKDCC-203ENST00000470578 RXRBP28702 533 aa23.06■■□□□ 1.28
PKDCC-203ENST00000470578 HAP1P54257 671 aaPredicted RBP23.06■■□□□ 1.28
PKDCC-203ENST00000470578 PLEKHG3A1L390 1219 aa23.05■■□□□ 1.28
PKDCC-203ENST00000470578 NGLY1Q96IV0 654 aa23.05■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms