RNA–Protein interactions for RNA: ENST00000470318.1

TSPAN1-204, Transcript of tetraspanin 1, humanhuman

TSL 2

Gene TSPAN1, Length 590 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN1-204ENST00000470318 C1orf167Q5SNV9 1468 aa22.28■■□□□ 1.16
TSPAN1-204ENST00000470318 PLEKHH1Q9ULM0 1364 aa22.27■■□□□ 1.16
TSPAN1-204ENST00000470318 BRINP3Q76B58 766 aa22.27■■□□□ 1.16
TSPAN1-204ENST00000470318 ADGRB2O60241 1585 aa22.26■■□□□ 1.15
TSPAN1-204ENST00000470318 WAPLQ7Z5K2 1190 aa22.26■■□□□ 1.15
TSPAN1-204ENST00000470318 SHPRHQ149N8 1683 aa22.25■■□□□ 1.15
TSPAN1-204ENST00000470318 SIN3AQ96ST3 1273 aa22.23■■□□□ 1.15
TSPAN1-204ENST00000470318 DISP3Q9P2K9 1392 aa22.23■■□□□ 1.15
TSPAN1-204ENST00000470318 TRPM1Q7Z4N2 1603 aa22.21■■□□□ 1.15
TSPAN1-204ENST00000470318 JCADQ9P266 1359 aa22.21■■□□□ 1.15
TSPAN1-204ENST00000470318 KIF1AQ12756 1690 aa22.2■■□□□ 1.15
TSPAN1-204ENST00000470318 L3MBTL2Q969R5 705 aa22.2■■□□□ 1.14
TSPAN1-204ENST00000470318 PRAM1Q96QH2 718 aa22.2■■□□□ 1.14
TSPAN1-204ENST00000470318 RGPD8O14715 1765 aaPredicted RBP22.2■■□□□ 1.14
TSPAN1-204ENST00000470318 NEUROD1Q13562 356 aa22.18■■□□□ 1.14
TSPAN1-204ENST00000470318 TRAK1Q9UPV9 953 aa22.18■■□□□ 1.14
TSPAN1-204ENST00000470318 POGKQ9P215 609 aa22.17■■□□□ 1.14
TSPAN1-204ENST00000470318 USP32Q8NFA0 1604 aa22.14■■□□□ 1.14
TSPAN1-204ENST00000470318 ORAI2Q96SN7 254 aa22.13■■□□□ 1.13
TSPAN1-204ENST00000470318 SAFB2Q14151 953 aaKnown RBP eCLIP22.12■■□□□ 1.13
TSPAN1-204ENST00000470318 ANKARQ7Z5J8 1434 aa22.12■■□□□ 1.13
TSPAN1-204ENST00000470318 SPATA31A6Q5VVP1 1343 aa22.11■■□□□ 1.13
TSPAN1-204ENST00000470318 ITSN1Q15811 1721 aa22.11■■□□□ 1.13
TSPAN1-204ENST00000470318 EIF3AQ14152 1382 aaKnown RBP22.11■■□□□ 1.13
TSPAN1-204ENST00000470318 TONSLQ96HA7 1378 aa22.11■■□□□ 1.13
TSPAN1-204ENST00000470318 NBPF1Q3BBV0 1214 aa22.1■■□□□ 1.13
TSPAN1-204ENST00000470318 ESCO1Q5FWF5 840 aa22.1■■□□□ 1.13
TSPAN1-204ENST00000470318 TULP4Q9NRJ4 1543 aa22.1■■□□□ 1.13
TSPAN1-204ENST00000470318 SOS2Q07890 1332 aaPredicted RBP22.09■■□□□ 1.13
TSPAN1-204ENST00000470318 NPHP3Q7Z494 1330 aa22.09■■□□□ 1.13
TSPAN1-204ENST00000470318 LRRC59Q96AG4 307 aaKnown RBP22.09■■□□□ 1.13
TSPAN1-204ENST00000470318 QRICH2Q9H0J4 1663 aa22.09■■□□□ 1.13
TSPAN1-204ENST00000470318 PXDNQ92626 1479 aa22.09■■□□□ 1.13
TSPAN1-204ENST00000470318 COL22A1Q8NFW1 1626 aaPredicted RBP22.07■■□□□ 1.12
TSPAN1-204ENST00000470318 DDX17Q92841 729 aaKnown RBP22.07■■□□□ 1.12
TSPAN1-204ENST00000470318 PCGF6Q9BYE7 350 aa22.07■■□□□ 1.12
TSPAN1-204ENST00000470318 NUTM2FA1L443 756 aa22.06■■□□□ 1.12
TSPAN1-204ENST00000470318 LRP6O75581 1613 aa22.06■■□□□ 1.12
TSPAN1-204ENST00000470318 MINK1Q8N4C8 1332 aaPredicted RBP22.06■■□□□ 1.12
TSPAN1-204ENST00000470318 PNPLA6Q8IY17 1366 aa22.05■■□□□ 1.12
TSPAN1-204ENST00000470318 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
TSPAN1-204ENST00000470318 ROCK2O75116 1388 aaKnown RBP22.04■■□□□ 1.12
TSPAN1-204ENST00000470318 TOPAZ1Q8N9V7 1692 aa22.04■■□□□ 1.12
TSPAN1-204ENST00000470318 GPRASP1Q5JY77 1395 aa22.03■■□□□ 1.12
TSPAN1-204ENST00000470318 WASLO00401 505 aaPredicted RBP22.03■■□□□ 1.12
TSPAN1-204ENST00000470318 HIRIP3Q9BW71 556 aaPredicted RBP22.03■■□□□ 1.12
TSPAN1-204ENST00000470318 CLSPNQ9HAW4 1339 aa22.03■■□□□ 1.12
TSPAN1-204ENST00000470318 RALGAPBQ86X10 1494 aa22.03■■□□□ 1.12
TSPAN1-204ENST00000470318 ATP7BP35670 1465 aa22.02■■□□□ 1.12
TSPAN1-204ENST00000470318 FOXO3O43524 673 aa22.01■■□□□ 1.11
TSPAN1-204ENST00000470318 PHF8Q9UPP1 1060 aa22.01■■□□□ 1.11
TSPAN1-204ENST00000470318 NBPF8Q3BBV2 869 aa22■■□□□ 1.11
TSPAN1-204ENST00000470318 CENPJQ9HC77 1338 aaPredicted RBP22■■□□□ 1.11
TSPAN1-204ENST00000470318 MARF1Q9Y4F3 1742 aaKnown RBP21.98■■□□□ 1.11
TSPAN1-204ENST00000470318 PRR36Q9H6K5 1346 aa21.98■■□□□ 1.11
TSPAN1-204ENST00000470318 TRPM3Q9HCF6 1732 aaPredicted RBP21.97■■□□□ 1.11
TSPAN1-204ENST00000470318 ILDR2Q71H61 639 aa21.95■■□□□ 1.1
TSPAN1-204ENST00000470318 RGS17Q9UGC6 210 aaPredicted RBP21.94■■□□□ 1.1
TSPAN1-204ENST00000470318 TNS3Q68CZ2 1445 aa21.94■■□□□ 1.1
TSPAN1-204ENST00000470318 SBNO1A3KN83 1393 aa21.93■■□□□ 1.1
TSPAN1-204ENST00000470318 XPCQ01831 940 aaPredicted RBP21.93■■□□□ 1.1
TSPAN1-204ENST00000470318 MEX3CQ5U5Q3 659 aaKnown RBP21.93■■□□□ 1.1
TSPAN1-204ENST00000470318 ALS2Q96Q42 1657 aa21.93■■□□□ 1.1
TSPAN1-204ENST00000470318 ABCA3Q99758 1704 aa21.92■■□□□ 1.1
TSPAN1-204ENST00000470318 SPATA31A3Q5VYP0 1347 aa21.92■■□□□ 1.1
TSPAN1-204ENST00000470318 PSME1Q06323 249 aa21.92■■□□□ 1.1
TSPAN1-204ENST00000470318 KRT28Q7Z3Y7 464 aa21.92■■□□□ 1.1
TSPAN1-204ENST00000470318 CDK19Q9BWU1 502 aa21.92■■□□□ 1.1
TSPAN1-204ENST00000470318 NUTM2BA6NNL0 878 aaPredicted RBP21.91■■□□□ 1.1
TSPAN1-204ENST00000470318 NUTM2EB1AL46 878 aaPredicted RBP21.91■■□□□ 1.1
TSPAN1-204ENST00000470318 NUTM2AQ8IVF1 878 aaPredicted RBP21.91■■□□□ 1.1
TSPAN1-204ENST00000470318 NUDT16Q96DE0 195 aaKnown RBP21.91■■□□□ 1.1
TSPAN1-204ENST00000470318 SBNO2Q9Y2G9 1366 aa21.9■■□□□ 1.1
TSPAN1-204ENST00000470318 PMFBP1Q8TBY8 1022 aa21.9■■□□□ 1.1
TSPAN1-204ENST00000470318 TIMELESSQ9UNS1 1208 aa21.9■■□□□ 1.1
TSPAN1-204ENST00000470318 CARD11Q9BXL7 1154 aa21.89■■□□□ 1.09
TSPAN1-204ENST00000470318 ARHGEF10O15013 1369 aa21.87■■□□□ 1.09
TSPAN1-204ENST00000470318 CCDC61Q9Y6R9 512 aa21.87■■□□□ 1.09
TSPAN1-204ENST00000470318 POLR3AO14802 1390 aaPredicted RBP21.87■■□□□ 1.09
TSPAN1-204ENST00000470318 EVC2Q86UK5 1308 aa21.85■■□□□ 1.09
TSPAN1-204ENST00000470318 SRPK2P78362 688 aaKnown RBP21.85■■□□□ 1.09
TSPAN1-204ENST00000470318 ZNF772Q68DY9 489 aaPredicted RBP21.85■■□□□ 1.09
TSPAN1-204ENST00000470318 CRYBG1Q9Y4K1 1723 aa21.85■■□□□ 1.09
TSPAN1-204ENST00000470318 PPIP5K1Q6PFW1 1433 aa21.84■■□□□ 1.09
TSPAN1-204ENST00000470318 NGDNQ8NEJ9 315 aaKnown RBP21.84■■□□□ 1.09
TSPAN1-204ENST00000470318 PLEKHG3A1L390 1219 aa21.83■■□□□ 1.09
TSPAN1-204ENST00000470318 POTEAQ6S8J7 498 aa21.82■■□□□ 1.08
TSPAN1-204ENST00000470318 AFF2P51816 1311 aa21.81■■□□□ 1.08
TSPAN1-204ENST00000470318 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.81■■□□□ 1.08
TSPAN1-204ENST00000470318 CCER1Q8TC90 406 aaPredicted RBP21.81■■□□□ 1.08
TSPAN1-204ENST00000470318 C8orf37Q96NL8 207 aa21.81■■□□□ 1.08
TSPAN1-204ENST00000470318 CABP2Q9NPB3 220 aa21.81■■□□□ 1.08
TSPAN1-204ENST00000470318 AKAP12Q02952 1782 aa21.81■■□□□ 1.08
TSPAN1-204ENST00000470318 ADAMTS2O95450 1211 aa21.8■■□□□ 1.08
TSPAN1-204ENST00000470318 ACEP12821 1306 aa21.8■■□□□ 1.08
TSPAN1-204ENST00000470318 ATAD2Q6PL18 1390 aa21.78■■□□□ 1.08
TSPAN1-204ENST00000470318 PHRF1Q9P1Y6 1649 aaKnown RBP21.78■■□□□ 1.08
TSPAN1-204ENST00000470318 BRD4O60885 1362 aaPredicted RBP21.77■■□□□ 1.08
TSPAN1-204ENST00000470318 PLCH1Q4KWH8 1693 aa21.77■■□□□ 1.08
TSPAN1-204ENST00000470318 SOCS7O14512 581 aa21.77■■□□□ 1.08
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms