RNA–Protein interactions for RNA: ENST00000470258.5

NHLRC3-203, Transcript of NHL repeat containing 3, humanhuman

TSL 1 (best) BASIC

Gene NHLRC3, Length 3,298 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-203ENST00000470258 WWC1Q8IX03 1113 aa11.93□□□□□ -0.5
NHLRC3-203ENST00000470258 MAP7D2Q96T17 732 aa11.92□□□□□ -0.5
NHLRC3-203ENST00000470258 SSFA2P28290 1259 aa11.92□□□□□ -0.5
NHLRC3-203ENST00000470258 HNRNPMP52272 730 aaKnown RBP eCLIP11.92□□□□□ -0.5
NHLRC3-203ENST00000470258 AAMPQ13685 434 aa11.92□□□□□ -0.5
NHLRC3-203ENST00000470258 ATP10BO94823 1461 aa11.92□□□□□ -0.5
NHLRC3-203ENST00000470258 MAGI2Q86UL8 1455 aa11.92□□□□□ -0.5
NHLRC3-203ENST00000470258 ABCC10Q5T3U5 1492 aa11.91□□□□□ -0.5
NHLRC3-203ENST00000470258 MAP3K4Q9Y6R4 1608 aa11.91□□□□□ -0.5
NHLRC3-203ENST00000470258 ASXL2Q76L83 1435 aa11.91□□□□□ -0.5
NHLRC3-203ENST00000470258 NINLQ9Y2I6 1382 aa11.9□□□□□ -0.5
NHLRC3-203ENST00000470258 PPP1R9BQ96SB3 815 aa11.9□□□□□ -0.5
NHLRC3-203ENST00000470258 PPRC1Q5VV67 1664 aaKnown RBP11.9□□□□□ -0.5
NHLRC3-203ENST00000470258 RAB3GAP1Q15042 981 aa11.9□□□□□ -0.5
NHLRC3-203ENST00000470258 CAVIN1Q6NZI2 390 aaKnown RBP11.9□□□□□ -0.5
NHLRC3-203ENST00000470258 WDR7Q9Y4E6 1490 aa11.9□□□□□ -0.51
NHLRC3-203ENST00000470258 C9orf84Q5VXU9 1444 aa11.89□□□□□ -0.51
NHLRC3-203ENST00000470258 ITPRIPQ8IWB1 547 aa11.88□□□□□ -0.51
NHLRC3-203ENST00000470258 RTEL1-TNFRSF6BF6WH68 1400 aa11.88□□□□□ -0.51
NHLRC3-203ENST00000470258 KDM5DQ9BY66 1539 aa11.88□□□□□ -0.51
NHLRC3-203ENST00000470258 GPATCH8Q9UKJ3 1502 aaKnown RBP11.88□□□□□ -0.51
NHLRC3-203ENST00000470258 MCTP1Q6DN14 999 aa11.88□□□□□ -0.51
NHLRC3-203ENST00000470258 ADGBQ8N7X0 1667 aa11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 DNTTIP2Q5QJE6 756 aaKnown RBP11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 SMC5Q8IY18 1101 aa11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 RBM42Q9BTD8 480 aaKnown RBP11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 LNPKQ9C0E8 428 aa11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 TRPM1Q7Z4N2 1603 aa11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 CD2BP2O95400 341 aaKnown RBP11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 PTMSP20962 102 aa11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 MVPQ14764 893 aaKnown RBP11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 CIZ1Q9ULV3 898 aaPredicted RBP11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 ADGRL2O95490 1459 aa11.87□□□□□ -0.51
NHLRC3-203ENST00000470258 ABCA9Q8IUA7 1624 aa11.86□□□□□ -0.51
NHLRC3-203ENST00000470258 TROQ12816 1431 aaPredicted RBP11.86□□□□□ -0.51
NHLRC3-203ENST00000470258 GPRASP1Q5JY77 1395 aa11.86□□□□□ -0.51
NHLRC3-203ENST00000470258 CDCA8Q53HL2 280 aa11.86□□□□□ -0.51
NHLRC3-203ENST00000470258 SMAP1Q8IYB5 467 aaPredicted RBP11.86□□□□□ -0.51
NHLRC3-203ENST00000470258 DZIP1LQ8IYY4 767 aaKnown RBP11.86□□□□□ -0.51
NHLRC3-203ENST00000470258 DDIT3P35638 169 aa11.85□□□□□ -0.51
NHLRC3-203ENST00000470258 A2MP01023 1474 aa11.85□□□□□ -0.51
NHLRC3-203ENST00000470258 PTMAP06454 111 aaKnown RBP11.85□□□□□ -0.51
NHLRC3-203ENST00000470258 ZKSCAN2Q63HK3 967 aa11.85□□□□□ -0.51
NHLRC3-203ENST00000470258 TCP11L2Q8N4U5 519 aa11.85□□□□□ -0.51
NHLRC3-203ENST00000470258 NPM1P06748 294 aaKnown RBP eCLIP11.85□□□□□ -0.51
NHLRC3-203ENST00000470258 PIK3C2GO75747 1445 aa11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 BAG4O95429 457 aaKnown RBP11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 KLHL40Q2TBA0 621 aa11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 MPNDQ8N594 471 aa11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 GAS2L2Q8NHY3 880 aa11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 RBSNQ9H1K0 784 aa11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 SMC4Q9NTJ3 1288 aa11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 TERF1P54274 439 aa11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 NOL7Q9UMY1 257 aaKnown RBP11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 K7ELQ4 463 aaPredicted RBP11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 RNF214Q8ND24 703 aa11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 TSC1Q92574 1164 aa11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 SNX21Q969T3 373 aa11.84□□□□□ -0.51
NHLRC3-203ENST00000470258 JARID2Q92833 1246 aaPredicted RBP11.83□□□□□ -0.52
NHLRC3-203ENST00000470258 RBM27Q9P2N5 1060 aaKnown RBP11.83□□□□□ -0.52
NHLRC3-203ENST00000470258 ASXL1Q8IXJ9 1541 aa11.83□□□□□ -0.52
NHLRC3-203ENST00000470258 DYNC1I1O14576 645 aa11.83□□□□□ -0.52
NHLRC3-203ENST00000470258 FGD1P98174 961 aa11.83□□□□□ -0.52
NHLRC3-203ENST00000470258 ZSCAN23Q3MJ62 389 aa11.83□□□□□ -0.52
NHLRC3-203ENST00000470258 TSPOAP1O95153 1857 aa11.83□□□□□ -0.52
NHLRC3-203ENST00000470258 PRIM1P49642 420 aaKnown RBP11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 RBM25P49756 843 aaKnown RBP11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 MTERF4Q7Z6M4 381 aaKnown RBP11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 TSR2Q969E8 191 aaKnown RBP11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 ZMYM3Q14202 1370 aa11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 CBX1P83916 185 aa11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 PRDM15P57071 1507 aaPredicted RBP11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 PLEKHD1A6NEE1 506 aa11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 CSPP1Q1MSJ5 1256 aa11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 FOXD4L5Q5VV16 416 aaPredicted RBP11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 FOXD4L4Q8WXT5 416 aaPredicted RBP11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 ZKSCAN5Q9Y2L8 839 aa11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 NCOA3Q9Y6Q9 1424 aa11.82□□□□□ -0.52
NHLRC3-203ENST00000470258 ZNF500O60304 480 aaPredicted RBP11.81□□□□□ -0.52
NHLRC3-203ENST00000470258 SASS6Q6UVJ0 657 aa11.81□□□□□ -0.52
NHLRC3-203ENST00000470258 EIF2AK3Q9NZJ5 1116 aaKnown RBP11.81□□□□□ -0.52
NHLRC3-203ENST00000470258 TTC37Q6PGP7 1564 aa11.81□□□□□ -0.52
NHLRC3-203ENST00000470258 FAM135AQ9P2D6 1515 aa11.81□□□□□ -0.52
NHLRC3-203ENST00000470258 FAM177BA6PVY3 158 aa11.8□□□□□ -0.52
NHLRC3-203ENST00000470258 PRPF40AO75400 957 aaKnown RBP11.8□□□□□ -0.52
NHLRC3-203ENST00000470258 NGEFQ8N5V2 710 aa11.8□□□□□ -0.52
NHLRC3-203ENST00000470258 RUNDC1Q96C34 613 aa11.8□□□□□ -0.52
NHLRC3-203ENST00000470258 MORC1Q86VD1 984 aa11.79□□□□□ -0.52
NHLRC3-203ENST00000470258 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.79□□□□□ -0.52
NHLRC3-203ENST00000470258 TRIM27P14373 513 aa11.79□□□□□ -0.52
NHLRC3-203ENST00000470258 CCDC94Q9BW85 323 aaPredicted RBP11.79□□□□□ -0.52
NHLRC3-203ENST00000470258 MYO5CQ9NQX4 1742 aa11.79□□□□□ -0.52
NHLRC3-203ENST00000470258 SYCE3A1L190 88 aa11.78□□□□□ -0.52
NHLRC3-203ENST00000470258 ANKRD45Q5TZF3 282 aa11.78□□□□□ -0.52
NHLRC3-203ENST00000470258 CHAMP1Q96JM3 812 aa11.78□□□□□ -0.52
NHLRC3-203ENST00000470258 ITSN2Q9NZM3 1697 aa11.78□□□□□ -0.52
NHLRC3-203ENST00000470258 HS1BP3Q53T59 392 aa11.78□□□□□ -0.52
NHLRC3-203ENST00000470258 DDX19BQ9UMR2 479 aa11.78□□□□□ -0.52
NHLRC3-203ENST00000470258 ZNF445P59923 1031 aa11.78□□□□□ -0.52
NHLRC3-203ENST00000470258 DMTNQ08495 405 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms