RNA–Protein interactions for RNA: ENST00000469804.1

KPNA4-202, Transcript of karyopherin subunit alpha 4, humanhuman

TSL 2

Gene KPNA4, Length 790 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNA4-202ENST00000469804 ATF3P18847 181 aa36.47■■■■□ 3.43
KPNA4-202ENST00000469804 PRAM1Q96QH2 718 aa36.45■■■■□ 3.43
KPNA4-202ENST00000469804 CDC42BPGQ6DT37 1551 aa36.44■■■■□ 3.42
KPNA4-202ENST00000469804 SAFB2Q14151 953 aaKnown RBP eCLIP36.44■■■■□ 3.42
KPNA4-202ENST00000469804 CADPS2Q86UW7 1296 aa36.44■■■■□ 3.42
KPNA4-202ENST00000469804 SIRT1Q96EB6 747 aa36.43■■■■□ 3.42
KPNA4-202ENST00000469804 SLAIN2Q9P270 581 aa36.42■■■■□ 3.42
KPNA4-202ENST00000469804 MST1RQ04912 1400 aa36.42■■■■□ 3.42
KPNA4-202ENST00000469804 POGKQ9P215 609 aa36.38■■■■□ 3.41
KPNA4-202ENST00000469804 ROCK2O75116 1388 aaKnown RBP36.38■■■■□ 3.41
KPNA4-202ENST00000469804 FMN2Q9NZ56 1722 aa36.37■■■■□ 3.41
KPNA4-202ENST00000469804 RALGAPBQ86X10 1494 aa36.36■■■■□ 3.41
KPNA4-202ENST00000469804 ADGRB2O60241 1585 aa36.34■■■■□ 3.41
KPNA4-202ENST00000469804 HSPA1LP34931 641 aa36.31■■■■□ 3.4
KPNA4-202ENST00000469804 C1orf167Q5SNV9 1468 aa36.31■■■■□ 3.4
KPNA4-202ENST00000469804 QRICH2Q9H0J4 1663 aa36.3■■■■□ 3.4
KPNA4-202ENST00000469804 RGPD8O14715 1765 aaPredicted RBP36.3■■■■□ 3.4
KPNA4-202ENST00000469804 MINK1Q8N4C8 1332 aaPredicted RBP36.29■■■■□ 3.4
KPNA4-202ENST00000469804 GPRASP1Q5JY77 1395 aa36.28■■■■□ 3.4
KPNA4-202ENST00000469804 HIRIP3Q9BW71 556 aaPredicted RBP36.27■■■■□ 3.4
KPNA4-202ENST00000469804 PHLPP1O60346 1717 aa36.27■■■■□ 3.4
KPNA4-202ENST00000469804 NUTM2FA1L443 756 aa36.26■■■■□ 3.4
KPNA4-202ENST00000469804 BRINP3Q76B58 766 aa36.25■■■■□ 3.39
KPNA4-202ENST00000469804 TIMELESSQ9UNS1 1208 aa36.24■■■■□ 3.39
KPNA4-202ENST00000469804 USP32Q8NFA0 1604 aa36.23■■■■□ 3.39
KPNA4-202ENST00000469804 NHSL1Q5SYE7 1610 aa36.22■■■■□ 3.39
KPNA4-202ENST00000469804 CARD11Q9BXL7 1154 aa36.2■■■■□ 3.39
KPNA4-202ENST00000469804 AHDC1Q5TGY3 1603 aaPredicted RBP36.19■■■■□ 3.38
KPNA4-202ENST00000469804 CENPJQ9HC77 1338 aaPredicted RBP36.19■■■■□ 3.38
KPNA4-202ENST00000469804 ORAI2Q96SN7 254 aa36.19■■■■□ 3.38
KPNA4-202ENST00000469804 COL16A1Q07092 1604 aaPredicted RBP36.17■■■■□ 3.38
KPNA4-202ENST00000469804 DDX17Q92841 729 aaKnown RBP36.13■■■■□ 3.37
KPNA4-202ENST00000469804 TULP4Q9NRJ4 1543 aa36.13■■■■□ 3.37
KPNA4-202ENST00000469804 EIF3AQ14152 1382 aaKnown RBP36.12■■■■□ 3.37
KPNA4-202ENST00000469804 WASLO00401 505 aaPredicted RBP36.11■■■■□ 3.37
KPNA4-202ENST00000469804 ESCO1Q5FWF5 840 aa36.11■■■■□ 3.37
KPNA4-202ENST00000469804 KIF1AQ12756 1690 aa36.1■■■■□ 3.37
KPNA4-202ENST00000469804 ANKARQ7Z5J8 1434 aa36.08■■■■□ 3.37
KPNA4-202ENST00000469804 PRR36Q9H6K5 1346 aa36.08■■■■□ 3.37
KPNA4-202ENST00000469804 ITSN1Q15811 1721 aa36.06■■■■□ 3.36
KPNA4-202ENST00000469804 ATP7BP35670 1465 aa36.05■■■■□ 3.36
KPNA4-202ENST00000469804 TOPAZ1Q8N9V7 1692 aa36.03■■■■□ 3.36
KPNA4-202ENST00000469804 CDK19Q9BWU1 502 aa36.03■■■■□ 3.36
KPNA4-202ENST00000469804 PHF8Q9UPP1 1060 aa35.97■■■■□ 3.35
KPNA4-202ENST00000469804 FOXO3O43524 673 aa35.96■■■■□ 3.35
KPNA4-202ENST00000469804 USP47Q96K76 1375 aa35.96■■■■□ 3.35
KPNA4-202ENST00000469804 SHPRHQ149N8 1683 aa35.96■■■■□ 3.35
KPNA4-202ENST00000469804 PXDNQ92626 1479 aa35.95■■■■□ 3.35
KPNA4-202ENST00000469804 PMFBP1Q8TBY8 1022 aa35.95■■■■□ 3.35
KPNA4-202ENST00000469804 NUDT16Q96DE0 195 aaKnown RBP35.95■■■■□ 3.35
KPNA4-202ENST00000469804 XPCQ01831 940 aaPredicted RBP35.94■■■■□ 3.34
KPNA4-202ENST00000469804 CABP2Q9NPB3 220 aa35.94■■■■□ 3.34
KPNA4-202ENST00000469804 SBNO2Q9Y2G9 1366 aa35.93■■■■□ 3.34
KPNA4-202ENST00000469804 SRPK2P78362 688 aaKnown RBP35.93■■■■□ 3.34
KPNA4-202ENST00000469804 SOS2Q07890 1332 aaPredicted RBP35.92■■■■□ 3.34
KPNA4-202ENST00000469804 NPHP3Q7Z494 1330 aa35.92■■■■□ 3.34
KPNA4-202ENST00000469804 ST20-MTHFSA0A0A6YYL1 179 aa35.91■■■■□ 3.34
KPNA4-202ENST00000469804 JCADQ9P266 1359 aa35.9■■■■□ 3.34
KPNA4-202ENST00000469804 EVC2Q86UK5 1308 aa35.9■■■■□ 3.34
KPNA4-202ENST00000469804 MED1Q15648 1581 aaPredicted RBP35.87■■■■□ 3.33
KPNA4-202ENST00000469804 TRPM3Q9HCF6 1732 aaPredicted RBP35.84■■■■□ 3.33
KPNA4-202ENST00000469804 LRRC59Q96AG4 307 aaKnown RBP35.84■■■■□ 3.33
KPNA4-202ENST00000469804 TESK2Q96S53 571 aa35.84■■■■□ 3.33
KPNA4-202ENST00000469804 PPIP5K1Q6PFW1 1433 aa35.83■■■■□ 3.33
KPNA4-202ENST00000469804 CCDC61Q9Y6R9 512 aa35.83■■■■□ 3.33
KPNA4-202ENST00000469804 KRT28Q7Z3Y7 464 aa35.82■■■■□ 3.32
KPNA4-202ENST00000469804 PNPLA6Q8IY17 1366 aa35.81■■■■□ 3.32
KPNA4-202ENST00000469804 NGDNQ8NEJ9 315 aaKnown RBP35.78■■■■□ 3.32
KPNA4-202ENST00000469804 PSME1Q06323 249 aa35.77■■■■□ 3.32
KPNA4-202ENST00000469804 LRP6O75581 1613 aa35.76■■■■□ 3.32
KPNA4-202ENST00000469804 COL22A1Q8NFW1 1626 aaPredicted RBP35.76■■■■□ 3.32
KPNA4-202ENST00000469804 ACEP12821 1306 aa35.75■■■■□ 3.31
KPNA4-202ENST00000469804 ALS2Q96Q42 1657 aa35.74■■■■□ 3.31
KPNA4-202ENST00000469804 POLR3AO14802 1390 aaPredicted RBP35.74■■■■□ 3.31
KPNA4-202ENST00000469804 DISP3Q9P2K9 1392 aa35.74■■■■□ 3.31
KPNA4-202ENST00000469804 PLEKHG3A1L390 1219 aa35.73■■■■□ 3.31
KPNA4-202ENST00000469804 TNS3Q68CZ2 1445 aa35.73■■■■□ 3.31
KPNA4-202ENST00000469804 AKAP12Q02952 1782 aa35.72■■■■□ 3.31
KPNA4-202ENST00000469804 CABP1Q9NZU7 370 aa35.72■■■■□ 3.31
KPNA4-202ENST00000469804 SPATA31A3Q5VYP0 1347 aa35.72■■■■□ 3.31
KPNA4-202ENST00000469804 ATAD2Q6PL18 1390 aa35.72■■■■□ 3.31
KPNA4-202ENST00000469804 SBNO1A3KN83 1393 aa35.7■■■■□ 3.31
KPNA4-202ENST00000469804 SPATA31A6Q5VVP1 1343 aa35.7■■■■□ 3.31
KPNA4-202ENST00000469804 NUTM2BA6NNL0 878 aaPredicted RBP35.68■■■■□ 3.3
KPNA4-202ENST00000469804 NUTM2EB1AL46 878 aaPredicted RBP35.68■■■■□ 3.3
KPNA4-202ENST00000469804 NUTM2AQ8IVF1 878 aaPredicted RBP35.68■■■■□ 3.3
KPNA4-202ENST00000469804 HSPA5P11021 654 aaKnown RBP35.67■■■■□ 3.3
KPNA4-202ENST00000469804 ABCA3Q99758 1704 aa35.66■■■■□ 3.3
KPNA4-202ENST00000469804 EIF4G2P78344 907 aaKnown RBP eCLIP35.66■■■■□ 3.3
KPNA4-202ENST00000469804 TMF1P82094 1093 aa35.63■■■■□ 3.29
KPNA4-202ENST00000469804 LMOD2Q6P5Q4 547 aa35.63■■■■□ 3.29
KPNA4-202ENST00000469804 MON2Q7Z3U7 1717 aa35.63■■■■□ 3.29
KPNA4-202ENST00000469804 PAK3O75914 559 aaPredicted RBP35.61■■■■□ 3.29
KPNA4-202ENST00000469804 PLEKHG5O94827 1062 aa35.6■■■■□ 3.29
KPNA4-202ENST00000469804 MARF1Q9Y4F3 1742 aaKnown RBP35.6■■■■□ 3.29
KPNA4-202ENST00000469804 CRYBG1Q9Y4K1 1723 aa35.6■■■■□ 3.29
KPNA4-202ENST00000469804 NRKQ7Z2Y5 1582 aa35.59■■■■□ 3.29
KPNA4-202ENST00000469804 USP6P35125 1406 aa35.59■■■■□ 3.29
KPNA4-202ENST00000469804 SLC24A1O60721 1099 aa35.59■■■■□ 3.29
KPNA4-202ENST00000469804 TMC1Q8TDI8 760 aa35.59■■■■□ 3.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms