RNA–Protein interactions for RNA: ENST00000469655.5

KCNC4-206, Transcript of potassium voltage-gated channel subfamily C member 4, humanhuman

TSL 1 (best)

Gene KCNC4, Length 3,487 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNC4-206ENST00000469655 PLXNC1O60486 1568 aa19.3■□□□□ 0.68
KCNC4-206ENST00000469655 GOLGA2Q08379 1002 aa19.3■□□□□ 0.68
KCNC4-206ENST00000469655 PLPPR3Q6T4P5 718 aa19.3■□□□□ 0.68
KCNC4-206ENST00000469655 PRDM15P57071 1507 aaPredicted RBP19.29■□□□□ 0.68
KCNC4-206ENST00000469655 RAPGEF3O95398 923 aa19.28■□□□□ 0.68
KCNC4-206ENST00000469655 WDR7Q9Y4E6 1490 aa19.28■□□□□ 0.68
KCNC4-206ENST00000469655 TBC1D2Q9BYX2 928 aa19.28■□□□□ 0.68
KCNC4-206ENST00000469655 KDM2BQ8NHM5 1336 aa19.28■□□□□ 0.68
KCNC4-206ENST00000469655 ANP32BQ92688 251 aaKnown RBP19.27■□□□□ 0.68
KCNC4-206ENST00000469655 RIPK4P57078 832 aa19.27■□□□□ 0.68
KCNC4-206ENST00000469655 PLCD3Q8N3E9 789 aa19.27■□□□□ 0.68
KCNC4-206ENST00000469655 VGLL3A8MV65 326 aa19.27■□□□□ 0.67
KCNC4-206ENST00000469655 U2SURPO15042 1029 aaKnown RBP19.26■□□□□ 0.67
KCNC4-206ENST00000469655 ASXL2Q76L83 1435 aa19.26■□□□□ 0.67
KCNC4-206ENST00000469655 NAP1L2Q9ULW6 460 aaPredicted RBP19.26■□□□□ 0.67
KCNC4-206ENST00000469655 SCAF11Q99590 1463 aaKnown RBP19.24■□□□□ 0.67
KCNC4-206ENST00000469655 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
KCNC4-206ENST00000469655 UQCRHLA0A096LP55 91 aa19.24■□□□□ 0.67
KCNC4-206ENST00000469655 UQCRHP07919 91 aa19.24■□□□□ 0.67
KCNC4-206ENST00000469655 PLEKHH1Q9ULM0 1364 aa19.24■□□□□ 0.67
KCNC4-206ENST00000469655 ZFYVE16Q7Z3T8 1539 aa19.23■□□□□ 0.67
KCNC4-206ENST00000469655 CARD14Q9BXL6 1004 aa19.23■□□□□ 0.67
KCNC4-206ENST00000469655 USP19O94966 1318 aa19.23■□□□□ 0.67
KCNC4-206ENST00000469655 FOXD4L1Q9NU39 408 aa19.23■□□□□ 0.67
KCNC4-206ENST00000469655 EIF3AQ14152 1382 aaKnown RBP19.23■□□□□ 0.67
KCNC4-206ENST00000469655 CENPJQ9HC77 1338 aaPredicted RBP19.23■□□□□ 0.67
KCNC4-206ENST00000469655 UHRF1BP1LA0JNW5 1464 aa19.23■□□□□ 0.67
KCNC4-206ENST00000469655 GAS2L3Q86XJ1 694 aa19.23■□□□□ 0.67
KCNC4-206ENST00000469655 ANTXR1Q9H6X2 564 aa19.23■□□□□ 0.67
KCNC4-206ENST00000469655 CLASP1Q7Z460 1538 aa19.22■□□□□ 0.67
KCNC4-206ENST00000469655 E9PCH4 1651 aa19.22■□□□□ 0.67
KCNC4-206ENST00000469655 XPCQ01831 940 aaPredicted RBP19.22■□□□□ 0.67
KCNC4-206ENST00000469655 CFAP65Q6ZU64 1925 aaKnown RBP19.22■□□□□ 0.67
KCNC4-206ENST00000469655 ATP7AQ04656 1500 aa19.22■□□□□ 0.67
KCNC4-206ENST00000469655 EIF2AK4Q9P2K8 1649 aaKnown RBP19.21■□□□□ 0.67
KCNC4-206ENST00000469655 RTEL1-TNFRSF6BF6WH68 1400 aa19.21■□□□□ 0.67
KCNC4-206ENST00000469655 OSCARQ8IYS5 282 aa19.21■□□□□ 0.67
KCNC4-206ENST00000469655 IGHDP01880 384 aa19.2■□□□□ 0.66
KCNC4-206ENST00000469655 FBLN1P23142 703 aa19.19■□□□□ 0.66
KCNC4-206ENST00000469655 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.19■□□□□ 0.66
KCNC4-206ENST00000469655 CLTCL1P53675 1640 aa19.19■□□□□ 0.66
KCNC4-206ENST00000469655 ELL2O00472 640 aaPredicted RBP19.19■□□□□ 0.66
KCNC4-206ENST00000469655 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.19■□□□□ 0.66
KCNC4-206ENST00000469655 MORC1Q86VD1 984 aa19.19■□□□□ 0.66
KCNC4-206ENST00000469655 GTF2E1P29083 439 aaPredicted RBP19.18■□□□□ 0.66
KCNC4-206ENST00000469655 DUSP27Q5VZP5 1158 aa19.18■□□□□ 0.66
KCNC4-206ENST00000469655 NOS1P29475 1434 aa19.18■□□□□ 0.66
KCNC4-206ENST00000469655 NCLP19338 710 aaKnown RBP19.17■□□□□ 0.66
KCNC4-206ENST00000469655 U2AF1L5P0DN76 240 aaPredicted RBP19.17■□□□□ 0.66
KCNC4-206ENST00000469655 MFAP1P55081 439 aaKnown RBP19.17■□□□□ 0.66
KCNC4-206ENST00000469655 U2AF1Q01081 240 aaKnown RBP eCLIP19.17■□□□□ 0.66
KCNC4-206ENST00000469655 TPRNQ4KMQ1 711 aa19.16■□□□□ 0.66
KCNC4-206ENST00000469655 CHMP5Q9NZZ3 219 aa19.16■□□□□ 0.66
KCNC4-206ENST00000469655 PTPRTO14522 1441 aa19.16■□□□□ 0.66
KCNC4-206ENST00000469655 TRPM2O94759 1503 aa19.16■□□□□ 0.66
KCNC4-206ENST00000469655 IGSF3O75054 1194 aa19.16■□□□□ 0.66
KCNC4-206ENST00000469655 ZSCAN30Q86W11 494 aa19.16■□□□□ 0.66
KCNC4-206ENST00000469655 TSR2Q969E8 191 aaKnown RBP19.16■□□□□ 0.66
KCNC4-206ENST00000469655 CBX1P83916 185 aa19.15■□□□□ 0.66
KCNC4-206ENST00000469655 PAXIP1Q6ZW49 1069 aaPredicted RBP19.15■□□□□ 0.66
KCNC4-206ENST00000469655 SOX12O15370 315 aa19.15■□□□□ 0.66
KCNC4-206ENST00000469655 NASPP49321 788 aaPredicted RBP19.15■□□□□ 0.66
KCNC4-206ENST00000469655 OFD1O75665 1012 aa19.15■□□□□ 0.66
KCNC4-206ENST00000469655 SMAP1Q8IYB5 467 aaPredicted RBP19.15■□□□□ 0.66
KCNC4-206ENST00000469655 MADDQ8WXG6 1647 aa19.14■□□□□ 0.66
KCNC4-206ENST00000469655 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
KCNC4-206ENST00000469655 MAP7D2Q96T17 732 aa19.14■□□□□ 0.65
KCNC4-206ENST00000469655 CD109Q6YHK3 1445 aa19.14■□□□□ 0.65
KCNC4-206ENST00000469655 STAC3Q96MF2 364 aa19.13■□□□□ 0.65
KCNC4-206ENST00000469655 DNTTIP2Q5QJE6 756 aaKnown RBP19.12■□□□□ 0.65
KCNC4-206ENST00000469655 CABP2Q9NPB3 220 aa19.12■□□□□ 0.65
KCNC4-206ENST00000469655 APBB1O00213 710 aa19.12■□□□□ 0.65
KCNC4-206ENST00000469655 DDX11L8A8MPP1 907 aa19.11■□□□□ 0.65
KCNC4-206ENST00000469655 TSC1Q92574 1164 aa19.1■□□□□ 0.65
KCNC4-206ENST00000469655 JARID2Q92833 1246 aaPredicted RBP19.1■□□□□ 0.65
KCNC4-206ENST00000469655 ASXL1Q8IXJ9 1541 aa19.1■□□□□ 0.65
KCNC4-206ENST00000469655 SLFN5Q08AF3 891 aa19.1■□□□□ 0.65
KCNC4-206ENST00000469655 FTSJ3Q8IY81 847 aaKnown RBP19.1■□□□□ 0.65
KCNC4-206ENST00000469655 CYB5RLQ6IPT4 315 aa19.09■□□□□ 0.65
KCNC4-206ENST00000469655 SPHKAPQ2M3C7 1700 aa19.09■□□□□ 0.65
KCNC4-206ENST00000469655 PPP4R3BQ5MIZ7 849 aa19.09■□□□□ 0.65
KCNC4-206ENST00000469655 SRPK2P78362 688 aaKnown RBP19.08■□□□□ 0.64
KCNC4-206ENST00000469655 CDK11BP21127 795 aaKnown RBP19.08■□□□□ 0.64
KCNC4-206ENST00000469655 MTHFSP49914 203 aa19.08■□□□□ 0.64
KCNC4-206ENST00000469655 HSCBQ8IWL3 235 aa19.08■□□□□ 0.64
KCNC4-206ENST00000469655 FAM177BA6PVY3 158 aa19.07■□□□□ 0.64
KCNC4-206ENST00000469655 MPNDQ8N594 471 aa19.07■□□□□ 0.64
KCNC4-206ENST00000469655 NSD3Q9BZ95 1437 aa19.07■□□□□ 0.64
KCNC4-206ENST00000469655 ZBTB22O15209 634 aa19.07■□□□□ 0.64
KCNC4-206ENST00000469655 ERVK-7P63135 1459 aa19.06■□□□□ 0.64
KCNC4-206ENST00000469655 NUTM2FA1L443 756 aa19.06■□□□□ 0.64
KCNC4-206ENST00000469655 CCDC173Q0VFZ6 552 aa19.06■□□□□ 0.64
KCNC4-206ENST00000469655 GGNBP2Q9H3C7 697 aa19.06■□□□□ 0.64
KCNC4-206ENST00000469655 STAG3Q9UJ98 1225 aa19.06■□□□□ 0.64
KCNC4-206ENST00000469655 LAMC1P11047 1609 aa19.05■□□□□ 0.64
KCNC4-206ENST00000469655 MLECQ14165 292 aa19.05■□□□□ 0.64
KCNC4-206ENST00000469655 NPATQ14207 1427 aa19.05■□□□□ 0.64
KCNC4-206ENST00000469655 RLBP1P12271 317 aa19.05■□□□□ 0.64
KCNC4-206ENST00000469655 ITPRIPQ8IWB1 547 aa19.05■□□□□ 0.64
KCNC4-206ENST00000469655 TCP11L2Q8N4U5 519 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms