RNA–Protein interactions for RNA: ENST00000469366.1

MACF1-212, Transcript of microtubule-actin crosslinking factor 1, humanhuman

TSL 3

Gene MACF1, Length 460 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MACF1-212ENST00000469366 JCADQ9P266 1359 aa17.16■□□□□ 0.34
MACF1-212ENST00000469366 CDC42BPGQ6DT37 1551 aa17.16■□□□□ 0.34
MACF1-212ENST00000469366 DDX17Q92841 729 aaKnown RBP17.16■□□□□ 0.34
MACF1-212ENST00000469366 ORAI2Q96SN7 254 aa17.16■□□□□ 0.34
MACF1-212ENST00000469366 RGS17Q9UGC6 210 aaPredicted RBP17.14■□□□□ 0.33
MACF1-212ENST00000469366 DLC1Q96QB1 1528 aa17.12■□□□□ 0.33
MACF1-212ENST00000469366 PRAM1Q96QH2 718 aa17.12■□□□□ 0.33
MACF1-212ENST00000469366 SIN3AQ96ST3 1273 aa17.12■□□□□ 0.33
MACF1-212ENST00000469366 SHPRHQ149N8 1683 aa17.12■□□□□ 0.33
MACF1-212ENST00000469366 TRIM26Q12899 539 aaPredicted RBP17.11■□□□□ 0.33
MACF1-212ENST00000469366 PHF23Q9BUL5 403 aaPredicted RBP17.11■□□□□ 0.33
MACF1-212ENST00000469366 FMN2Q9NZ56 1722 aa17.1■□□□□ 0.33
MACF1-212ENST00000469366 TRAK1Q9UPV9 953 aa17.1■□□□□ 0.33
MACF1-212ENST00000469366 LRP6O75581 1613 aa17.1■□□□□ 0.33
MACF1-212ENST00000469366 NUTM2FA1L443 756 aa17.09■□□□□ 0.33
MACF1-212ENST00000469366 SAFB2Q14151 953 aaKnown RBP eCLIP17.09■□□□□ 0.33
MACF1-212ENST00000469366 SOS2Q07890 1332 aaPredicted RBP17.08■□□□□ 0.32
MACF1-212ENST00000469366 SPATA31A6Q5VVP1 1343 aa17.08■□□□□ 0.32
MACF1-212ENST00000469366 ESCO1Q5FWF5 840 aa17.08■□□□□ 0.32
MACF1-212ENST00000469366 LRRC59Q96AG4 307 aaKnown RBP17.08■□□□□ 0.32
MACF1-212ENST00000469366 L3MBTL2Q969R5 705 aa17.07■□□□□ 0.32
MACF1-212ENST00000469366 RGPD8O14715 1765 aaPredicted RBP17.07■□□□□ 0.32
MACF1-212ENST00000469366 POGKQ9P215 609 aa17.06■□□□□ 0.32
MACF1-212ENST00000469366 KIAA1210Q9ULL0 1709 aa17.06■□□□□ 0.32
MACF1-212ENST00000469366 NBPF1Q3BBV0 1214 aa17.05■□□□□ 0.32
MACF1-212ENST00000469366 PNPLA6Q8IY17 1366 aa17.04■□□□□ 0.32
MACF1-212ENST00000469366 SOCS7O14512 581 aa17.04■□□□□ 0.32
MACF1-212ENST00000469366 ARHGEF28Q8N1W1 1705 aaKnown RBP17.04■□□□□ 0.32
MACF1-212ENST00000469366 ADGRB2O60241 1585 aa17.03■□□□□ 0.32
MACF1-212ENST00000469366 FOXO3O43524 673 aa17.03■□□□□ 0.32
MACF1-212ENST00000469366 NEUROD1Q13562 356 aa17.03■□□□□ 0.32
MACF1-212ENST00000469366 POTEAQ6S8J7 498 aa17.03■□□□□ 0.32
MACF1-212ENST00000469366 PXDNQ92626 1479 aa17.03■□□□□ 0.32
MACF1-212ENST00000469366 NUTM2BA6NNL0 878 aaPredicted RBP17.02■□□□□ 0.32
MACF1-212ENST00000469366 NUTM2EB1AL46 878 aaPredicted RBP17.02■□□□□ 0.32
MACF1-212ENST00000469366 NUTM2AQ8IVF1 878 aaPredicted RBP17.02■□□□□ 0.32
MACF1-212ENST00000469366 HIRIP3Q9BW71 556 aaPredicted RBP17.02■□□□□ 0.32
MACF1-212ENST00000469366 USP32Q8NFA0 1604 aa17.02■□□□□ 0.31
MACF1-212ENST00000469366 NPHP3Q7Z494 1330 aa17.01■□□□□ 0.31
MACF1-212ENST00000469366 MINK1Q8N4C8 1332 aaPredicted RBP17.01■□□□□ 0.31
MACF1-212ENST00000469366 XPCQ01831 940 aaPredicted RBP17.01■□□□□ 0.31
MACF1-212ENST00000469366 KIF1AQ12756 1690 aa16.99■□□□□ 0.31
MACF1-212ENST00000469366 PRR36Q9H6K5 1346 aa16.98■□□□□ 0.31
MACF1-212ENST00000469366 PHF8Q9UPP1 1060 aa16.98■□□□□ 0.31
MACF1-212ENST00000469366 ANKARQ7Z5J8 1434 aa16.97■□□□□ 0.31
MACF1-212ENST00000469366 COL22A1Q8NFW1 1626 aaPredicted RBP16.97■□□□□ 0.31
MACF1-212ENST00000469366 WASLO00401 505 aaPredicted RBP16.97■□□□□ 0.31
MACF1-212ENST00000469366 MEX3CQ5U5Q3 659 aaKnown RBP16.97■□□□□ 0.31
MACF1-212ENST00000469366 KRT28Q7Z3Y7 464 aa16.96■□□□□ 0.31
MACF1-212ENST00000469366 TRPM1Q7Z4N2 1603 aa16.96■□□□□ 0.3
MACF1-212ENST00000469366 TULP4Q9NRJ4 1543 aa16.95■□□□□ 0.3
MACF1-212ENST00000469366 NBPF8Q3BBV2 869 aa16.94■□□□□ 0.3
MACF1-212ENST00000469366 PMFBP1Q8TBY8 1022 aa16.94■□□□□ 0.3
MACF1-212ENST00000469366 SPATA31A3Q5VYP0 1347 aa16.94■□□□□ 0.3
MACF1-212ENST00000469366 ADAMTS2O95450 1211 aa16.92■□□□□ 0.3
MACF1-212ENST00000469366 AFF2P51816 1311 aa16.92■□□□□ 0.3
MACF1-212ENST00000469366 ZNF772Q68DY9 489 aaPredicted RBP16.91■□□□□ 0.3
MACF1-212ENST00000469366 CDK19Q9BWU1 502 aa16.91■□□□□ 0.3
MACF1-212ENST00000469366 EIF3AQ14152 1382 aaKnown RBP16.9■□□□□ 0.3
MACF1-212ENST00000469366 NUDT16Q96DE0 195 aaKnown RBP16.9■□□□□ 0.3
MACF1-212ENST00000469366 C8orf37Q96NL8 207 aa16.9■□□□□ 0.3
MACF1-212ENST00000469366 ATP7BP35670 1465 aa16.9■□□□□ 0.3
MACF1-212ENST00000469366 PSME1Q06323 249 aa16.89■□□□□ 0.29
MACF1-212ENST00000469366 CENPJQ9HC77 1338 aaPredicted RBP16.89■□□□□ 0.29
MACF1-212ENST00000469366 SBNO1A3KN83 1393 aa16.89■□□□□ 0.29
MACF1-212ENST00000469366 TRPM3Q9HCF6 1732 aaPredicted RBP16.88■□□□□ 0.29
MACF1-212ENST00000469366 TNS3Q68CZ2 1445 aa16.87■□□□□ 0.29
MACF1-212ENST00000469366 NGLY1Q96IV0 654 aa16.87■□□□□ 0.29
MACF1-212ENST00000469366 QRICH2Q9H0J4 1663 aa16.87■□□□□ 0.29
MACF1-212ENST00000469366 MARF1Q9Y4F3 1742 aaKnown RBP16.87■□□□□ 0.29
MACF1-212ENST00000469366 ITSN1Q15811 1721 aa16.86■□□□□ 0.29
MACF1-212ENST00000469366 ROCK2O75116 1388 aaKnown RBP16.86■□□□□ 0.29
MACF1-212ENST00000469366 GPRASP1Q5JY77 1395 aa16.86■□□□□ 0.29
MACF1-212ENST00000469366 TOPAZ1Q8N9V7 1692 aa16.85■□□□□ 0.29
MACF1-212ENST00000469366 FNBP4Q8N3X1 1017 aaPredicted RBP16.85■□□□□ 0.29
MACF1-212ENST00000469366 TONSLQ96HA7 1378 aa16.85■□□□□ 0.29
MACF1-212ENST00000469366 NGDNQ8NEJ9 315 aaKnown RBP16.84■□□□□ 0.29
MACF1-212ENST00000469366 CABLES1Q8TDN4 633 aa16.84■□□□□ 0.29
MACF1-212ENST00000469366 QTRT2Q9H974 415 aaKnown RBP16.84■□□□□ 0.29
MACF1-212ENST00000469366 ALS2Q96Q42 1657 aa16.84■□□□□ 0.29
MACF1-212ENST00000469366 PLEKHG3A1L390 1219 aa16.83■□□□□ 0.28
MACF1-212ENST00000469366 CCDC61Q9Y6R9 512 aa16.83■□□□□ 0.28
MACF1-212ENST00000469366 RXRBP28702 533 aa16.82■□□□□ 0.28
MACF1-212ENST00000469366 LMOD2Q6P5Q4 547 aa16.82■□□□□ 0.28
MACF1-212ENST00000469366 PCGF6Q9BYE7 350 aa16.82■□□□□ 0.28
MACF1-212ENST00000469366 CABP2Q9NPB3 220 aa16.82■□□□□ 0.28
MACF1-212ENST00000469366 ABCA3Q99758 1704 aa16.82■□□□□ 0.28
MACF1-212ENST00000469366 POLR3AO14802 1390 aaPredicted RBP16.81■□□□□ 0.28
MACF1-212ENST00000469366 ARHGEF10O15013 1369 aa16.81■□□□□ 0.28
MACF1-212ENST00000469366 ACEP12821 1306 aa16.81■□□□□ 0.28
MACF1-212ENST00000469366 USP21Q9UK80 565 aa16.81■□□□□ 0.28
MACF1-212ENST00000469366 BCL9LQ86UU0 1499 aa16.8■□□□□ 0.28
MACF1-212ENST00000469366 RALGAPBQ86X10 1494 aa16.8■□□□□ 0.28
MACF1-212ENST00000469366 PLEKHG5O94827 1062 aa16.8■□□□□ 0.28
MACF1-212ENST00000469366 SRPK2P78362 688 aaKnown RBP16.8■□□□□ 0.28
MACF1-212ENST00000469366 RBM6P78332 1123 aaKnown RBP16.78■□□□□ 0.28
MACF1-212ENST00000469366 CARD11Q9BXL7 1154 aa16.78■□□□□ 0.28
MACF1-212ENST00000469366 SLIT2O94813 1529 aa16.78■□□□□ 0.28
MACF1-212ENST00000469366 CRYBG1Q9Y4K1 1723 aa16.78■□□□□ 0.28
MACF1-212ENST00000469366 CDK12Q9NYV4 1490 aaPredicted RBP16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms