RNA–Protein interactions for RNA: ENST00000469278.5

SOX2-OT-204, SOX2 overlapping transcript, humanhuman

TSL 4

Gene SOX2-OT, Length 561 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-204ENST00000469278 GCGRP47871 477 aa9.8□□□□□ -0.84
SOX2-OT-204ENST00000469278 MSS51Q4VC12 460 aa9.8□□□□□ -0.84
SOX2-OT-204ENST00000469278 AMER1Q5JTC6 1135 aaPredicted RBP9.8□□□□□ -0.84
SOX2-OT-204ENST00000469278 BRICD5Q6PL45 260 aa9.8□□□□□ -0.84
SOX2-OT-204ENST00000469278 TRIM47Q96LD4 638 aa9.8□□□□□ -0.84
SOX2-OT-204ENST00000469278 TRIM32Q13049 653 aa9.79□□□□□ -0.84
SOX2-OT-204ENST00000469278 GRIPAP1Q4V328 841 aa9.79□□□□□ -0.84
SOX2-OT-204ENST00000469278 GNPATO15228 680 aa9.78□□□□□ -0.84
SOX2-OT-204ENST00000469278 RNF19BQ6ZMZ0 732 aa9.78□□□□□ -0.84
SOX2-OT-204ENST00000469278 NLRP7Q8WX94 980 aa9.78□□□□□ -0.84
SOX2-OT-204ENST00000469278 MRGPRX2Q96LB1 330 aa9.78□□□□□ -0.84
SOX2-OT-204ENST00000469278 KIFC2Q96AC6 838 aa9.77□□□□□ -0.85
SOX2-OT-204ENST00000469278 REPIN1Q9BWE0 567 aaKnown RBP9.77□□□□□ -0.85
SOX2-OT-204ENST00000469278 J3QL48 77 aa9.76□□□□□ -0.85
SOX2-OT-204ENST00000469278 Q3C1V9 767 aa9.75□□□□□ -0.85
SOX2-OT-204ENST00000469278 FAM181BA6NEQ2 426 aa9.74□□□□□ -0.85
SOX2-OT-204ENST00000469278 RBM26Q5T8P6 1007 aaKnown RBP9.74□□□□□ -0.85
SOX2-OT-204ENST00000469278 LCE2CQ5TA81 110 aa9.74□□□□□ -0.85
SOX2-OT-204ENST00000469278 SLC16A10Q8TF71 515 aa9.73□□□□□ -0.85
SOX2-OT-204ENST00000469278 HPS1Q92902 700 aa9.73□□□□□ -0.85
SOX2-OT-204ENST00000469278 SMYD5Q6GMV2 418 aa9.72□□□□□ -0.85
SOX2-OT-204ENST00000469278 MMP16P51512 607 aa9.71□□□□□ -0.86
SOX2-OT-204ENST00000469278 CCDC24Q8N4L8 307 aa9.7□□□□□ -0.86
SOX2-OT-204ENST00000469278 USB1Q9BQ65 265 aaKnown RBP9.68□□□□□ -0.86
SOX2-OT-204ENST00000469278 DXOO77932 396 aaKnown RBP9.67□□□□□ -0.86
SOX2-OT-204ENST00000469278 RC3H1Q5TC82 1133 aaKnown RBP9.67□□□□□ -0.86
SOX2-OT-204ENST00000469278 PHOX2BQ99453 314 aa9.67□□□□□ -0.86
SOX2-OT-204ENST00000469278 RTN4Q9NQC3 1192 aaKnown RBP9.67□□□□□ -0.86
SOX2-OT-204ENST00000469278 TESPA1A2RU30 521 aaPredicted RBP9.66□□□□□ -0.86
SOX2-OT-204ENST00000469278 GPR37O15354 613 aa9.66□□□□□ -0.86
SOX2-OT-204ENST00000469278 WNT7BP56706 349 aa9.66□□□□□ -0.86
SOX2-OT-204ENST00000469278 ALDH1A1P00352 501 aa9.65□□□□□ -0.86
SOX2-OT-204ENST00000469278 NXF1Q9UBU9 619 aaKnown RBP9.65□□□□□ -0.86
SOX2-OT-204ENST00000469278 SKOR1P84550 965 aa9.63□□□□□ -0.87
SOX2-OT-204ENST00000469278 IRF7Q92985 503 aa9.63□□□□□ -0.87
SOX2-OT-204ENST00000469278 KDM4AO75164 1064 aa9.62□□□□□ -0.87
SOX2-OT-204ENST00000469278 GMPRP36959 345 aa9.62□□□□□ -0.87
SOX2-OT-204ENST00000469278 ZSCAN1Q8NBB4 408 aa9.62□□□□□ -0.87
SOX2-OT-204ENST00000469278 BMP1P13497 986 aa9.6□□□□□ -0.87
SOX2-OT-204ENST00000469278 CD46P15529 392 aa9.6□□□□□ -0.87
SOX2-OT-204ENST00000469278 NPAS3Q8IXF0 933 aa9.6□□□□□ -0.87
SOX2-OT-204ENST00000469278 EHBP1Q8NDI1 1231 aa9.59□□□□□ -0.87
SOX2-OT-204ENST00000469278 WASF2Q9Y6W5 498 aa9.59□□□□□ -0.87
SOX2-OT-204ENST00000469278 CAPN5O15484 640 aaPredicted RBP9.58□□□□□ -0.88
SOX2-OT-204ENST00000469278 VEGFBP49765 207 aa9.58□□□□□ -0.88
SOX2-OT-204ENST00000469278 USP46P62068 366 aa9.58□□□□□ -0.88
SOX2-OT-204ENST00000469278 GPIHBP1Q8IV16 184 aa9.58□□□□□ -0.88
SOX2-OT-204ENST00000469278 JUNDP17535 347 aa9.56□□□□□ -0.88
SOX2-OT-204ENST00000469278 TRIM46Q7Z4K8 759 aa9.56□□□□□ -0.88
SOX2-OT-204ENST00000469278 HLA-CQ95604 372 aa9.56□□□□□ -0.88
SOX2-OT-204ENST00000469278 H3BM21 787 aa9.54□□□□□ -0.88
SOX2-OT-204ENST00000469278 HOXA2O43364 376 aa9.53□□□□□ -0.88
SOX2-OT-204ENST00000469278 NUDT12Q9BQG2 462 aa9.53□□□□□ -0.88
SOX2-OT-204ENST00000469278 SIAH2O43255 324 aa9.52□□□□□ -0.89
SOX2-OT-204ENST00000469278 LORP23490 312 aaPredicted RBP9.52□□□□□ -0.89
SOX2-OT-204ENST00000469278 GUCA2AQ02747 115 aa9.51□□□□□ -0.89
SOX2-OT-204ENST00000469278 ERBB4Q15303 1308 aa9.51□□□□□ -0.89
SOX2-OT-204ENST00000469278 MDM2Q00987 491 aaPredicted RBP9.5□□□□□ -0.89
SOX2-OT-204ENST00000469278 MAP2K5Q13163 448 aa9.49□□□□□ -0.89
SOX2-OT-204ENST00000469278 SYMPKQ92797 1274 aaKnown RBP9.49□□□□□ -0.89
SOX2-OT-204ENST00000469278 ZFP42Q96MM3 310 aa9.49□□□□□ -0.89
SOX2-OT-204ENST00000469278 LOC100996750A0A140TA64 210 aa9.48□□□□□ -0.89
SOX2-OT-204ENST00000469278 PTCRAQ6ISU1 281 aaPredicted RBP9.48□□□□□ -0.89
SOX2-OT-204ENST00000469278 RETREG3Q86VR2 466 aa9.48□□□□□ -0.89
SOX2-OT-204ENST00000469278 KRTAP4-6Q9BYQ5 205 aa9.48□□□□□ -0.89
SOX2-OT-204ENST00000469278 SH3BP2P78314 561 aa9.46□□□□□ -0.9
SOX2-OT-204ENST00000469278 SCARF1Q14162 830 aa9.46□□□□□ -0.9
SOX2-OT-204ENST00000469278 CCNYL3P0C7X3 344 aa9.45□□□□□ -0.9
SOX2-OT-204ENST00000469278 NUTM1Q86Y26 1132 aa9.45□□□□□ -0.9
SOX2-OT-204ENST00000469278 TLL2Q9Y6L7 1015 aa9.45□□□□□ -0.9
SOX2-OT-204ENST00000469278 MS4A1P11836 297 aa9.44□□□□□ -0.9
SOX2-OT-204ENST00000469278 PLEKHG3A1L390 1219 aa9.43□□□□□ -0.9
SOX2-OT-204ENST00000469278 MRPL14Q6P1L8 145 aaKnown RBP9.43□□□□□ -0.9
SOX2-OT-204ENST00000469278 C6orf229H3BNL8 230 aa9.42□□□□□ -0.9
SOX2-OT-204ENST00000469278 IRF6O14896 467 aa9.42□□□□□ -0.9
SOX2-OT-204ENST00000469278 NNTQ13423 1086 aa9.42□□□□□ -0.9
SOX2-OT-204ENST00000469278 LINC01559Q495D7 138 aa9.42□□□□□ -0.9
SOX2-OT-204ENST00000469278 UNC93B1Q9H1C4 597 aa9.42□□□□□ -0.9
SOX2-OT-204ENST00000469278 PURBQ96QR8 312 aaKnown RBP9.41□□□□□ -0.9
SOX2-OT-204ENST00000469278 FDX1P10109 184 aa9.4□□□□□ -0.9
SOX2-OT-204ENST00000469278 GPCPD1Q9NPB8 672 aa9.4□□□□□ -0.9
SOX2-OT-204ENST00000469278 ADH1CP00326 375 aa9.39□□□□□ -0.91
SOX2-OT-204ENST00000469278 CLCN1P35523 988 aa9.39□□□□□ -0.91
SOX2-OT-204ENST00000469278 PTPRNQ16849 979 aa9.39□□□□□ -0.91
SOX2-OT-204ENST00000469278 BAP1Q92560 729 aa9.39□□□□□ -0.91
SOX2-OT-204ENST00000469278 SOBPA7XYQ1 873 aa9.38□□□□□ -0.91
SOX2-OT-204ENST00000469278 VSIG8P0DPA2 414 aa9.38□□□□□ -0.91
SOX2-OT-204ENST00000469278 VARSP26640 1264 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-204ENST00000469278 WDR4P57081 412 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-204ENST00000469278 KRI1Q8N9T8 703 aaKnown RBP9.38□□□□□ -0.91
SOX2-OT-204ENST00000469278 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
SOX2-OT-204ENST00000469278 MINK1Q8N4C8 1332 aaPredicted RBP9.37□□□□□ -0.91
SOX2-OT-204ENST00000469278 SUZ12Q15022 739 aaKnown RBP9.37□□□□□ -0.91
SOX2-OT-204ENST00000469278 ZNF511Q8NB15 262 aa9.37□□□□□ -0.91
SOX2-OT-204ENST00000469278 TIMP2P16035 220 aa9.36□□□□□ -0.91
SOX2-OT-204ENST00000469278 EVA1BQ9NVM1 165 aa9.36□□□□□ -0.91
SOX2-OT-204ENST00000469278 TULP1O00294 542 aaPredicted RBP9.35□□□□□ -0.91
SOX2-OT-204ENST00000469278 MAN1A2O60476 641 aa9.35□□□□□ -0.91
SOX2-OT-204ENST00000469278 KCNH2Q12809 1159 aa9.35□□□□□ -0.91
SOX2-OT-204ENST00000469278 MPNDQ8N594 471 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms