RNA–Protein interactions for RNA: ENST00000469114.1

UPK3B-204, Transcript of uroplakin 3B, humanhuman

TSL 3

Gene UPK3B, Length 530 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-204ENST00000469114 FOXD1Q16676 465 aa29.55■■■□□ 2.32
UPK3B-204ENST00000469114 PPLO60437 1756 aa29.54■■■□□ 2.32
UPK3B-204ENST00000469114 NPHP3Q7Z494 1330 aa29.53■■■□□ 2.32
UPK3B-204ENST00000469114 CDC42BPGQ6DT37 1551 aa29.53■■■□□ 2.32
UPK3B-204ENST00000469114 MYOM2P54296 1465 aa29.53■■■□□ 2.32
UPK3B-204ENST00000469114 ESCO1Q5FWF5 840 aa29.5■■■□□ 2.31
UPK3B-204ENST00000469114 MARF1Q9Y4F3 1742 aaKnown RBP29.49■■■□□ 2.31
UPK3B-204ENST00000469114 RRBP1Q9P2E9 1410 aaKnown RBP29.48■■■□□ 2.31
UPK3B-204ENST00000469114 SRCAPQ6ZRS2 3230 aa29.48■■■□□ 2.31
UPK3B-204ENST00000469114 PXDNQ92626 1479 aa29.48■■■□□ 2.31
UPK3B-204ENST00000469114 ZRANB1Q9UGI0 708 aa29.47■■■□□ 2.31
UPK3B-204ENST00000469114 BCL9LQ86UU0 1499 aa29.45■■■□□ 2.31
UPK3B-204ENST00000469114 SLC4A1APQ9BWU0 796 aaKnown RBP29.45■■■□□ 2.31
UPK3B-204ENST00000469114 LRPPRCP42704 1394 aaKnown RBP29.44■■■□□ 2.3
UPK3B-204ENST00000469114 CCDC125Q86Z20 511 aa29.44■■■□□ 2.3
UPK3B-204ENST00000469114 FOXO3O43524 673 aa29.42■■■□□ 2.3
UPK3B-204ENST00000469114 EP400Q96L91 3159 aa29.4■■■□□ 2.3
UPK3B-204ENST00000469114 XPCQ01831 940 aaPredicted RBP29.4■■■□□ 2.3
UPK3B-204ENST00000469114 GJD4Q96KN9 370 aaPredicted RBP29.39■■■□□ 2.3
UPK3B-204ENST00000469114 TNKS1BP1Q9C0C2 1729 aaKnown RBP29.39■■■□□ 2.3
UPK3B-204ENST00000469114 TECPR2O15040 1411 aa29.37■■■□□ 2.29
UPK3B-204ENST00000469114 NUTM2FA1L443 756 aa29.35■■■□□ 2.29
UPK3B-204ENST00000469114 STK26Q9P289 416 aa29.35■■■□□ 2.29
UPK3B-204ENST00000469114 ADGRF5Q8IZF2 1346 aa29.35■■■□□ 2.29
UPK3B-204ENST00000469114 WAPLQ7Z5K2 1190 aa29.34■■■□□ 2.29
UPK3B-204ENST00000469114 KNDC1Q76NI1 1749 aa29.33■■■□□ 2.29
UPK3B-204ENST00000469114 KIF1AQ12756 1690 aa29.32■■■□□ 2.28
UPK3B-204ENST00000469114 UNC5CLQ8IV45 518 aa29.32■■■□□ 2.28
UPK3B-204ENST00000469114 FMN2Q9NZ56 1722 aa29.31■■■□□ 2.28
UPK3B-204ENST00000469114 CCDC144AA2RUR9 1427 aa29.31■■■□□ 2.28
UPK3B-204ENST00000469114 ABCC11Q96J66 1382 aa29.31■■■□□ 2.28
UPK3B-204ENST00000469114 SLIT2O94813 1529 aa29.3■■■□□ 2.28
UPK3B-204ENST00000469114 RALGAPBQ86X10 1494 aa29.3■■■□□ 2.28
UPK3B-204ENST00000469114 ANKRD30BQ9BXX2 1392 aa29.3■■■□□ 2.28
UPK3B-204ENST00000469114 SPATA31A3Q5VYP0 1347 aa29.3■■■□□ 2.28
UPK3B-204ENST00000469114 IFT172Q9UG01 1749 aa29.29■■■□□ 2.28
UPK3B-204ENST00000469114 GLI3P10071 1580 aa29.29■■■□□ 2.28
UPK3B-204ENST00000469114 USP32Q8NFA0 1604 aa29.27■■■□□ 2.28
UPK3B-204ENST00000469114 RGL3Q3MIN7 710 aa29.27■■■□□ 2.28
UPK3B-204ENST00000469114 BLMP54132 1417 aaPredicted RBP29.27■■■□□ 2.28
UPK3B-204ENST00000469114 PLEKHH1Q9ULM0 1364 aa29.26■■■□□ 2.28
UPK3B-204ENST00000469114 SPATA31E1Q6ZUB1 1445 aa29.26■■■□□ 2.27
UPK3B-204ENST00000469114 TMEM132EQ6IEE7 984 aa29.25■■■□□ 2.27
UPK3B-204ENST00000469114 KRT28Q7Z3Y7 464 aa29.23■■■□□ 2.27
UPK3B-204ENST00000469114 BRWD3Q6RI45 1802 aa29.22■■■□□ 2.27
UPK3B-204ENST00000469114 PIK3C2GO75747 1445 aa29.22■■■□□ 2.27
UPK3B-204ENST00000469114 YTHDC2Q9H6S0 1430 aaKnown RBP29.22■■■□□ 2.27
UPK3B-204ENST00000469114 HAP1P54257 671 aaPredicted RBP29.21■■■□□ 2.27
UPK3B-204ENST00000469114 TNS3Q68CZ2 1445 aa29.2■■■□□ 2.26
UPK3B-204ENST00000469114 PSME1Q06323 249 aa29.18■■■□□ 2.26
UPK3B-204ENST00000469114 SF3B2Q13435 895 aaKnown RBP29.18■■■□□ 2.26
UPK3B-204ENST00000469114 RGPD8O14715 1765 aaPredicted RBP29.17■■■□□ 2.26
UPK3B-204ENST00000469114 VPS72Q15906 364 aa29.17■■■□□ 2.26
UPK3B-204ENST00000469114 SEPT12Q8IYM1 358 aa29.17■■■□□ 2.26
UPK3B-204ENST00000469114 SIRT1Q96EB6 747 aa29.17■■■□□ 2.26
UPK3B-204ENST00000469114 NWD2Q9ULI1 1742 aa29.17■■■□□ 2.26
UPK3B-204ENST00000469114 PHF8Q9UPP1 1060 aa29.16■■■□□ 2.26
UPK3B-204ENST00000469114 PLCH1Q4KWH8 1693 aa29.15■■■□□ 2.26
UPK3B-204ENST00000469114 DEFB132Q7Z7B7 95 aa29.14■■■□□ 2.26
UPK3B-204ENST00000469114 MPHOSPH9Q99550 1183 aa29.13■■■□□ 2.25
UPK3B-204ENST00000469114 SBNO1A3KN83 1393 aa29.13■■■□□ 2.25
UPK3B-204ENST00000469114 CABLES1Q8TDN4 633 aa29.12■■■□□ 2.25
UPK3B-204ENST00000469114 CCDC9Q9Y3X0 531 aaKnown RBP29.12■■■□□ 2.25
UPK3B-204ENST00000469114 ABCA3Q99758 1704 aa29.11■■■□□ 2.25
UPK3B-204ENST00000469114 ARHGEF10O15013 1369 aa29.11■■■□□ 2.25
UPK3B-204ENST00000469114 NRXN1Q9ULB1 1477 aa29.1■■■□□ 2.25
UPK3B-204ENST00000469114 ONECUT3O60422 494 aaPredicted RBP29.09■■■□□ 2.25
UPK3B-204ENST00000469114 PLEKHG5O94827 1062 aa29.09■■■□□ 2.25
UPK3B-204ENST00000469114 LMOD2Q6P5Q4 547 aa29.09■■■□□ 2.25
UPK3B-204ENST00000469114 C14orf93Q9H972 538 aaKnown RBP29.09■■■□□ 2.25
UPK3B-204ENST00000469114 DHX57Q6P158 1386 aaKnown RBP29.09■■■□□ 2.25
UPK3B-204ENST00000469114 KRT27Q7Z3Y8 459 aa29.08■■■□□ 2.25
UPK3B-204ENST00000469114 LRP5O75197 1615 aa29.05■■■□□ 2.24
UPK3B-204ENST00000469114 CFAP70Q5T0N1 1121 aa29.03■■■□□ 2.24
UPK3B-204ENST00000469114 PRAM1Q96QH2 718 aa29.03■■■□□ 2.24
UPK3B-204ENST00000469114 ANKARQ7Z5J8 1434 aa29.03■■■□□ 2.24
UPK3B-204ENST00000469114 SAFB2Q14151 953 aaKnown RBP eCLIP29.02■■■□□ 2.24
UPK3B-204ENST00000469114 A0A0G2JS52 829 aa29.01■■■□□ 2.23
UPK3B-204ENST00000469114 FAM83GA6ND36 823 aa29.01■■■□□ 2.23
UPK3B-204ENST00000469114 MYT1Q01538 1121 aa29.01■■■□□ 2.23
UPK3B-204ENST00000469114 DLC1Q96QB1 1528 aa28.99■■■□□ 2.23
UPK3B-204ENST00000469114 BAG6P46379 1132 aa28.99■■■□□ 2.23
UPK3B-204ENST00000469114 PMFBP1Q8TBY8 1022 aa28.99■■■□□ 2.23
UPK3B-204ENST00000469114 POGKQ9P215 609 aa28.99■■■□□ 2.23
UPK3B-204ENST00000469114 NRAPQ86VF7 1730 aa28.99■■■□□ 2.23
UPK3B-204ENST00000469114 ADGRB2O60241 1585 aa28.97■■■□□ 2.23
UPK3B-204ENST00000469114 ACIN1Q9UKV3 1341 aaKnown RBP28.95■■■□□ 2.23
UPK3B-204ENST00000469114 TRPM3Q9HCF6 1732 aaPredicted RBP28.95■■■□□ 2.23
UPK3B-204ENST00000469114 FAM98CQ17RN3 349 aaKnown RBP28.95■■■□□ 2.22
UPK3B-204ENST00000469114 COL14A1Q05707 1796 aaKnown RBP28.95■■■□□ 2.22
UPK3B-204ENST00000469114 BTG4Q9NY30 223 aa28.94■■■□□ 2.22
UPK3B-204ENST00000469114 GPRASP1Q5JY77 1395 aa28.93■■■□□ 2.22
UPK3B-204ENST00000469114 ALS2Q96Q42 1657 aa28.93■■■□□ 2.22
UPK3B-204ENST00000469114 RGPD1P0DJD0 1748 aa28.91■■■□□ 2.22
UPK3B-204ENST00000469114 EIF3AQ14152 1382 aaKnown RBP28.91■■■□□ 2.22
UPK3B-204ENST00000469114 PSDA5PKW4 1024 aaPredicted RBP28.91■■■□□ 2.22
UPK3B-204ENST00000469114 HRCP23327 699 aa28.88■■■□□ 2.21
UPK3B-204ENST00000469114 ADGRB1O14514 1584 aa28.87■■■□□ 2.21
UPK3B-204ENST00000469114 TULP4Q9NRJ4 1543 aa28.86■■■□□ 2.21
UPK3B-204ENST00000469114 HIRIP3Q9BW71 556 aaPredicted RBP28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms