RNA–Protein interactions for RNA: ENST00000468878.1

TRIM46-207, Transcript of tripartite motif containing 46, humanhuman

TSL 2

Gene TRIM46, Length 3,318 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM46-207ENST00000468878 BLMP54132 1417 aaPredicted RBP22.38■■□□□ 1.17
TRIM46-207ENST00000468878 NPATQ14207 1427 aa22.38■■□□□ 1.17
TRIM46-207ENST00000468878 THUMPD2Q9BTF0 503 aaKnown RBP22.38■■□□□ 1.17
TRIM46-207ENST00000468878 SLKQ9H2G2 1235 aaPredicted RBP22.37■■□□□ 1.17
TRIM46-207ENST00000468878 SHROOM2Q13796 1616 aa22.37■■□□□ 1.17
TRIM46-207ENST00000468878 HDGFL2Q7Z4V5 671 aaPredicted RBP22.36■■□□□ 1.17
TRIM46-207ENST00000468878 ERVK-7P63135 1459 aa22.36■■□□□ 1.17
TRIM46-207ENST00000468878 RIPK4P57078 832 aa22.36■■□□□ 1.17
TRIM46-207ENST00000468878 EXOSC9Q06265 439 aaKnown RBP22.36■■□□□ 1.17
TRIM46-207ENST00000468878 NCKAP5LQ9HCH0 1330 aa22.35■■□□□ 1.17
TRIM46-207ENST00000468878 FAM161AQ3B820 660 aa22.35■■□□□ 1.17
TRIM46-207ENST00000468878 TXNDC2Q86VQ3 553 aa22.35■■□□□ 1.17
TRIM46-207ENST00000468878 CDK19Q9BWU1 502 aa22.35■■□□□ 1.17
TRIM46-207ENST00000468878 PTPRTO14522 1441 aa22.35■■□□□ 1.17
TRIM46-207ENST00000468878 RLBP1P12271 317 aa22.35■■□□□ 1.17
TRIM46-207ENST00000468878 TERF2IPQ9NYB0 399 aa22.35■■□□□ 1.17
TRIM46-207ENST00000468878 MS4A1P11836 297 aa22.34■■□□□ 1.17
TRIM46-207ENST00000468878 UHRF1BP1LA0JNW5 1464 aa22.34■■□□□ 1.17
TRIM46-207ENST00000468878 ZNF518AQ6AHZ1 1483 aa22.34■■□□□ 1.17
TRIM46-207ENST00000468878 TRPM2O94759 1503 aa22.34■■□□□ 1.17
TRIM46-207ENST00000468878 IL27Q8NEV9 243 aa22.34■■□□□ 1.17
TRIM46-207ENST00000468878 ZBTB4Q9P1Z0 1013 aaPredicted RBP22.33■■□□□ 1.17
TRIM46-207ENST00000468878 CLASP1Q7Z460 1538 aa22.31■■□□□ 1.16
TRIM46-207ENST00000468878 ZMYM4Q5VZL5 1548 aa22.31■■□□□ 1.16
TRIM46-207ENST00000468878 ZRANB1Q9UGI0 708 aa22.31■■□□□ 1.16
TRIM46-207ENST00000468878 MADDQ8WXG6 1647 aa22.3■■□□□ 1.16
TRIM46-207ENST00000468878 RARSP54136 660 aaKnown RBP22.3■■□□□ 1.16
TRIM46-207ENST00000468878 MYH16Q9H6N6 1097 aa22.3■■□□□ 1.16
TRIM46-207ENST00000468878 DDRGK1Q96HY6 314 aa22.3■■□□□ 1.16
TRIM46-207ENST00000468878 ZNF521Q96K83 1311 aa22.29■■□□□ 1.16
TRIM46-207ENST00000468878 NKTRP30414 1462 aaKnown RBP22.29■■□□□ 1.16
TRIM46-207ENST00000468878 DIAPH1O60610 1272 aaKnown RBP22.28■■□□□ 1.16
TRIM46-207ENST00000468878 YEATS2Q9ULM3 1422 aa22.27■■□□□ 1.16
TRIM46-207ENST00000468878 RRS1Q15050 365 aaKnown RBP22.27■■□□□ 1.16
TRIM46-207ENST00000468878 PCDHB15Q9Y5E8 787 aa22.27■■□□□ 1.16
TRIM46-207ENST00000468878 FYB1O15117 783 aa22.26■■□□□ 1.15
TRIM46-207ENST00000468878 PRKAR2BP31323 418 aa22.26■■□□□ 1.15
TRIM46-207ENST00000468878 ZBTB7CA1YPR0 619 aa22.25■■□□□ 1.15
TRIM46-207ENST00000468878 APBB1O00213 710 aa22.25■■□□□ 1.15
TRIM46-207ENST00000468878 SPHKAPQ2M3C7 1700 aa22.25■■□□□ 1.15
TRIM46-207ENST00000468878 PIK3C2GO75747 1445 aa22.25■■□□□ 1.15
TRIM46-207ENST00000468878 SEC24BO95487 1268 aa22.25■■□□□ 1.15
TRIM46-207ENST00000468878 C14orf37Q86TY3 774 aa22.24■■□□□ 1.15
TRIM46-207ENST00000468878 C1orf115Q9H7X2 142 aa22.23■■□□□ 1.15
TRIM46-207ENST00000468878 UPF2Q9HAU5 1272 aaKnown RBP22.23■■□□□ 1.15
TRIM46-207ENST00000468878 SLC52A1Q9NWF4 448 aa22.23■■□□□ 1.15
TRIM46-207ENST00000468878 EMILIN1Q9Y6C2 1016 aa22.23■■□□□ 1.15
TRIM46-207ENST00000468878 TMPOP42166 694 aaKnown RBP22.23■■□□□ 1.15
TRIM46-207ENST00000468878 ZKSCAN2Q63HK3 967 aa22.23■■□□□ 1.15
TRIM46-207ENST00000468878 MFAP1P55081 439 aaKnown RBP22.22■■□□□ 1.15
TRIM46-207ENST00000468878 DZIP1LQ8IYY4 767 aaKnown RBP22.22■■□□□ 1.15
TRIM46-207ENST00000468878 PDZRN3Q9UPQ7 1066 aa22.22■■□□□ 1.15
TRIM46-207ENST00000468878 DCTN1Q14203 1278 aa22.21■■□□□ 1.15
TRIM46-207ENST00000468878 C8orf34Q49A92 452 aa22.21■■□□□ 1.15
TRIM46-207ENST00000468878 NME9Q86XW9 330 aa22.21■■□□□ 1.15
TRIM46-207ENST00000468878 KDM2BQ8NHM5 1336 aa22.21■■□□□ 1.15
TRIM46-207ENST00000468878 NOB1Q9ULX3 412 aaKnown RBP22.21■■□□□ 1.15
TRIM46-207ENST00000468878 A0A1W2PP64 1363 aa22.21■■□□□ 1.15
TRIM46-207ENST00000468878 SSH1Q8WYL5 1049 aa22.2■■□□□ 1.14
TRIM46-207ENST00000468878 RPGRIP1LQ68CZ1 1315 aa22.2■■□□□ 1.14
TRIM46-207ENST00000468878 POGZQ7Z3K3 1410 aa22.2■■□□□ 1.14
TRIM46-207ENST00000468878 TET3O43151 1660 aa22.18■■□□□ 1.14
TRIM46-207ENST00000468878 PDE3AQ14432 1141 aa22.18■■□□□ 1.14
TRIM46-207ENST00000468878 SLC26A8Q96RN1 970 aa22.18■■□□□ 1.14
TRIM46-207ENST00000468878 RWDD1Q9H446 243 aaPredicted RBP22.18■■□□□ 1.14
TRIM46-207ENST00000468878 CEBPAP49715 358 aaPredicted RBP22.18■■□□□ 1.14
TRIM46-207ENST00000468878 ABCA6Q8N139 1617 aa22.17■■□□□ 1.14
TRIM46-207ENST00000468878 CEP152O94986 1710 aa22.17■■□□□ 1.14
TRIM46-207ENST00000468878 KDM5AP29375 1690 aaKnown RBP22.16■■□□□ 1.14
TRIM46-207ENST00000468878 NUTM2GQ5VZR2 741 aa22.16■■□□□ 1.14
TRIM46-207ENST00000468878 LNPKQ9C0E8 428 aa22.16■■□□□ 1.14
TRIM46-207ENST00000468878 POLR3AO14802 1390 aaPredicted RBP22.16■■□□□ 1.14
TRIM46-207ENST00000468878 NFKBIBQ15653 356 aa22.15■■□□□ 1.14
TRIM46-207ENST00000468878 TRMT2AQ8IZ69 625 aaKnown RBP22.15■■□□□ 1.14
TRIM46-207ENST00000468878 PMFBP1Q8TBY8 1022 aa22.15■■□□□ 1.14
TRIM46-207ENST00000468878 FAM83GA6ND36 823 aa22.14■■□□□ 1.14
TRIM46-207ENST00000468878 FRAT2O75474 233 aaPredicted RBP22.14■■□□□ 1.13
TRIM46-207ENST00000468878 WDR63Q8IWG1 891 aa22.14■■□□□ 1.13
TRIM46-207ENST00000468878 SYNMO15061 1565 aa22.14■■□□□ 1.13
TRIM46-207ENST00000468878 MAP3K4Q9Y6R4 1608 aa22.13■■□□□ 1.13
TRIM46-207ENST00000468878 EFCAB6Q5THR3 1501 aa22.13■■□□□ 1.13
TRIM46-207ENST00000468878 RNF17Q9BXT8 1623 aaKnown RBP22.13■■□□□ 1.13
TRIM46-207ENST00000468878 PPRC1Q5VV67 1664 aaKnown RBP22.13■■□□□ 1.13
TRIM46-207ENST00000468878 PHACTR3Q96KR7 559 aa22.13■■□□□ 1.13
TRIM46-207ENST00000468878 KIF1BO60333 1816 aa22.12■■□□□ 1.13
TRIM46-207ENST00000468878 TRIM27P14373 513 aa22.12■■□□□ 1.13
TRIM46-207ENST00000468878 TMEM57Q8N5G2 664 aa22.12■■□□□ 1.13
TRIM46-207ENST00000468878 RBM33Q96EV2 1170 aaKnown RBP22.11■■□□□ 1.13
TRIM46-207ENST00000468878 ANKRD36BQ8N2N9 1353 aa22.11■■□□□ 1.13
TRIM46-207ENST00000468878 EIF5BO60841 1220 aaKnown RBP22.11■■□□□ 1.13
TRIM46-207ENST00000468878 KIDINS220Q9ULH0 1771 aa22.11■■□□□ 1.13
TRIM46-207ENST00000468878 NPC1L1Q9UHC9 1359 aa22.1■■□□□ 1.13
TRIM46-207ENST00000468878 LTV1Q96GA3 475 aaPredicted RBP22.1■■□□□ 1.13
TRIM46-207ENST00000468878 FOXD4L1Q9NU39 408 aa22.1■■□□□ 1.13
TRIM46-207ENST00000468878 MVPQ14764 893 aaKnown RBP22.09■■□□□ 1.13
TRIM46-207ENST00000468878 COG3Q96JB2 828 aa22.09■■□□□ 1.13
TRIM46-207ENST00000468878 INO80Q9ULG1 1556 aaPredicted RBP22.09■■□□□ 1.13
TRIM46-207ENST00000468878 IQGAP1P46940 1657 aa22.08■■□□□ 1.13
TRIM46-207ENST00000468878 ABCA9Q8IUA7 1624 aa22.08■■□□□ 1.13
TRIM46-207ENST00000468878 NECTIN2Q92692 538 aa22.08■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms