RNA–Protein interactions for RNA: ENST00000468477.1

CDHR3-206, Transcript of cadherin related family member 3, humanhuman

TSL 2

Gene CDHR3, Length 482 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR3-206ENST00000468477 ZBTB24O43167 697 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-206ENST00000468477 PDIA4P13667 645 aaKnown RBP5.93□□□□□ -1.46
CDHR3-206ENST00000468477 TTLL12Q14166 644 aaPredicted RBP5.93□□□□□ -1.46
CDHR3-206ENST00000468477 SLC27A5Q9Y2P5 690 aa5.93□□□□□ -1.46
CDHR3-206ENST00000468477 BARGINQ6ZT62 677 aa5.92□□□□□ -1.46
CDHR3-206ENST00000468477 ZC3H15Q8WU90 426 aaKnown RBP5.92□□□□□ -1.46
CDHR3-206ENST00000468477 PPEF1O14829 653 aaPredicted RBP5.91□□□□□ -1.46
CDHR3-206ENST00000468477 ZMYND10O75800 440 aa5.91□□□□□ -1.46
CDHR3-206ENST00000468477 CD2BP2O95400 341 aaKnown RBP5.91□□□□□ -1.46
CDHR3-206ENST00000468477 ZNF598Q86UK7 904 aaKnown RBP5.91□□□□□ -1.46
CDHR3-206ENST00000468477 DIXDC1Q155Q3 683 aa5.9□□□□□ -1.46
CDHR3-206ENST00000468477 MSS51Q4VC12 460 aa5.9□□□□□ -1.46
CDHR3-206ENST00000468477 ZNF697Q5TEC3 545 aa5.9□□□□□ -1.46
CDHR3-206ENST00000468477 SPRYD7Q5W111 196 aa5.9□□□□□ -1.46
CDHR3-206ENST00000468477 BRICD5Q6PL45 260 aa5.9□□□□□ -1.46
CDHR3-206ENST00000468477 FAM217BQ9NTX9 383 aaPredicted RBP5.9□□□□□ -1.46
CDHR3-206ENST00000468477 SSTR3P32745 418 aaPredicted RBP5.89□□□□□ -1.47
CDHR3-206ENST00000468477 THAP11Q96EK4 314 aa5.89□□□□□ -1.47
CDHR3-206ENST00000468477 USB1Q9BQ65 265 aaKnown RBP5.89□□□□□ -1.47
CDHR3-206ENST00000468477 FCF1Q9Y324 198 aaKnown RBP5.89□□□□□ -1.47
CDHR3-206ENST00000468477 HOXA2O43364 376 aa5.88□□□□□ -1.47
CDHR3-206ENST00000468477 HMGB1P09429 215 aaKnown RBP5.88□□□□□ -1.47
CDHR3-206ENST00000468477 CDK11BP21127 795 aaKnown RBP5.88□□□□□ -1.47
CDHR3-206ENST00000468477 RPIAP49247 311 aa5.88□□□□□ -1.47
CDHR3-206ENST00000468477 PKDCCQ504Y2 493 aa5.88□□□□□ -1.47
CDHR3-206ENST00000468477 TRAF7Q6Q0C0 670 aa5.88□□□□□ -1.47
CDHR3-206ENST00000468477 AK7Q96M32 723 aa5.88□□□□□ -1.47
CDHR3-206ENST00000468477 CDK11AQ9UQ88 783 aaPredicted RBP5.88□□□□□ -1.47
CDHR3-206ENST00000468477 IGSF3O75054 1194 aa5.87□□□□□ -1.47
CDHR3-206ENST00000468477 AMHR2Q16671 573 aa5.87□□□□□ -1.47
CDHR3-206ENST00000468477 PRR20EP86478 221 aa5.86□□□□□ -1.47
CDHR3-206ENST00000468477 PRR20CP86479 221 aa5.86□□□□□ -1.47
CDHR3-206ENST00000468477 PRR20DP86480 221 aa5.86□□□□□ -1.47
CDHR3-206ENST00000468477 PRR20BP86481 221 aa5.86□□□□□ -1.47
CDHR3-206ENST00000468477 PRR20AP86496 221 aa5.86□□□□□ -1.47
CDHR3-206ENST00000468477 RNF19BQ6ZMZ0 732 aa5.86□□□□□ -1.47
CDHR3-206ENST00000468477 LIAT1Q6ZQX7 453 aa5.86□□□□□ -1.47
CDHR3-206ENST00000468477 FAM160A2Q8N612 972 aaPredicted RBP5.86□□□□□ -1.47
CDHR3-206ENST00000468477 C1orf115Q9H7X2 142 aa5.86□□□□□ -1.47
CDHR3-206ENST00000468477 C6orf229H3BNL8 230 aa5.85□□□□□ -1.47
CDHR3-206ENST00000468477 LCE2BO14633 110 aa5.85□□□□□ -1.47
CDHR3-206ENST00000468477 GIGYF2Q6Y7W6 1299 aaKnown RBP5.85□□□□□ -1.47
CDHR3-206ENST00000468477 CCDC24Q8N4L8 307 aa5.85□□□□□ -1.47
CDHR3-206ENST00000468477 FDX1P10109 184 aa5.84□□□□□ -1.47
CDHR3-206ENST00000468477 MMP16P51512 607 aa5.84□□□□□ -1.47
CDHR3-206ENST00000468477 FOXC1Q12948 553 aa5.84□□□□□ -1.47
CDHR3-206ENST00000468477 PRDM9Q9NQV7 894 aa5.84□□□□□ -1.47
CDHR3-206ENST00000468477 SPDYE5A6NIY4 337 aa5.83□□□□□ -1.48
CDHR3-206ENST00000468477 TNFRSF10AO00220 468 aa5.83□□□□□ -1.48
CDHR3-206ENST00000468477 DGAT1O75907 488 aa5.83□□□□□ -1.48
CDHR3-206ENST00000468477 HSP90B1P14625 803 aaKnown RBP5.83□□□□□ -1.48
CDHR3-206ENST00000468477 RETREG3Q86VR2 466 aa5.83□□□□□ -1.48
CDHR3-206ENST00000468477 BEGAINQ9BUH8 593 aa5.83□□□□□ -1.48
CDHR3-206ENST00000468477 FAM187AA6NFU0 413 aa5.82□□□□□ -1.48
CDHR3-206ENST00000468477 ARID3CA6NKF2 412 aa5.82□□□□□ -1.48
CDHR3-206ENST00000468477 TRIM66O15016 1216 aa5.82□□□□□ -1.48
CDHR3-206ENST00000468477 DXOO77932 396 aaKnown RBP5.82□□□□□ -1.48
CDHR3-206ENST00000468477 PLA2G2CQ5R387 149 aa5.82□□□□□ -1.48
CDHR3-206ENST00000468477 CYP4X1Q8N118 509 aa5.82□□□□□ -1.48
CDHR3-206ENST00000468477 SLC24A3Q9HC58 644 aa5.82□□□□□ -1.48
CDHR3-206ENST00000468477 APBB1O00213 710 aa5.81□□□□□ -1.48
CDHR3-206ENST00000468477 GDF9O60383 454 aa5.81□□□□□ -1.48
CDHR3-206ENST00000468477 JUNDP17535 347 aa5.81□□□□□ -1.48
CDHR3-206ENST00000468477 MTMR2Q13614 643 aa5.81□□□□□ -1.48
CDHR3-206ENST00000468477 KCTD17Q8N5Z5 321 aa5.81□□□□□ -1.48
CDHR3-206ENST00000468477 SPIRE2Q8WWL2 714 aa5.81□□□□□ -1.48
CDHR3-206ENST00000468477 REPIN1Q9BWE0 567 aaKnown RBP5.81□□□□□ -1.48
CDHR3-206ENST00000468477 TTC24A2A3L6 582 aaPredicted RBP5.8□□□□□ -1.48
CDHR3-206ENST00000468477 RAD21O60216 631 aa5.8□□□□□ -1.48
CDHR3-206ENST00000468477 MS4A1P11836 297 aa5.8□□□□□ -1.48
CDHR3-206ENST00000468477 GJA5P36382 358 aa5.8□□□□□ -1.48
CDHR3-206ENST00000468477 GUCA2AQ02747 115 aa5.8□□□□□ -1.48
CDHR3-206ENST00000468477 TRIM32Q13049 653 aa5.8□□□□□ -1.48
CDHR3-206ENST00000468477 PARP9Q8IXQ6 854 aa5.8□□□□□ -1.48
CDHR3-206ENST00000468477 HLA-CQ95604 372 aa5.8□□□□□ -1.48
CDHR3-206ENST00000468477 EMID1Q96A84 441 aaPredicted RBP5.8□□□□□ -1.48
CDHR3-206ENST00000468477 PDE4DQ08499 809 aa5.79□□□□□ -1.48
CDHR3-206ENST00000468477 TRIM67Q6ZTA4 783 aa5.79□□□□□ -1.48
CDHR3-206ENST00000468477 NUDT12Q9BQG2 462 aa5.79□□□□□ -1.48
CDHR3-206ENST00000468477 MOXD2PA6NHM9 499 aa5.78□□□□□ -1.48
CDHR3-206ENST00000468477 WNT7BP56706 349 aa5.78□□□□□ -1.48
CDHR3-206ENST00000468477 SYMPKQ92797 1274 aaKnown RBP5.78□□□□□ -1.48
CDHR3-206ENST00000468477 TBC1D2Q9BYX2 928 aa5.78□□□□□ -1.48
CDHR3-206ENST00000468477 WNT7AO00755 349 aa5.77□□□□□ -1.49
CDHR3-206ENST00000468477 CCNYL3P0C7X3 344 aa5.77□□□□□ -1.49
CDHR3-206ENST00000468477 NDUFV2P19404 249 aa5.77□□□□□ -1.49
CDHR3-206ENST00000468477 ZNF787Q6DD87 383 aa5.77□□□□□ -1.49
CDHR3-206ENST00000468477 ZBTB3Q9H5J0 574 aa5.77□□□□□ -1.49
CDHR3-206ENST00000468477 PKD2L1Q9P0L9 805 aa5.77□□□□□ -1.49
CDHR3-206ENST00000468477 NUTM2BA6NNL0 878 aaPredicted RBP5.76□□□□□ -1.49
CDHR3-206ENST00000468477 NUTM2EB1AL46 878 aaPredicted RBP5.76□□□□□ -1.49
CDHR3-206ENST00000468477 PTPRNQ16849 979 aa5.76□□□□□ -1.49
CDHR3-206ENST00000468477 NUTM2DQ5VT03 806 aaPredicted RBP5.76□□□□□ -1.49
CDHR3-206ENST00000468477 DESI1Q6ICB0 168 aa5.76□□□□□ -1.49
CDHR3-206ENST00000468477 RIC3Q7Z5B4 369 aa5.76□□□□□ -1.49
CDHR3-206ENST00000468477 NUTM2AQ8IVF1 878 aaPredicted RBP5.76□□□□□ -1.49
CDHR3-206ENST00000468477 SNIP1Q8TAD8 396 aaKnown RBP5.76□□□□□ -1.49
CDHR3-206ENST00000468477 PRR7Q8TB68 274 aa5.76□□□□□ -1.49
CDHR3-206ENST00000468477 PUS7Q96PZ0 661 aaKnown RBP5.76□□□□□ -1.49
CDHR3-206ENST00000468477 CHMP4AQ9BY43 222 aa5.76□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms