RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 CDC42BPGQ6DT37 1551 aa19.71■□□□□ 0.75
PTPN7-207ENST00000468385 FOXD1Q16676 465 aa19.7■□□□□ 0.74
PTPN7-207ENST00000468385 TRPC5Q9UL62 973 aaPredicted RBP19.7■□□□□ 0.74
PTPN7-207ENST00000468385 ADGRF5Q8IZF2 1346 aa19.7■□□□□ 0.74
PTPN7-207ENST00000468385 MYOM2P54296 1465 aa19.69■□□□□ 0.74
PTPN7-207ENST00000468385 ESCO1Q5FWF5 840 aa19.69■□□□□ 0.74
PTPN7-207ENST00000468385 NPHP3Q7Z494 1330 aa19.69■□□□□ 0.74
PTPN7-207ENST00000468385 ATRNO75882 1429 aa19.68■□□□□ 0.74
PTPN7-207ENST00000468385 PXDNQ92626 1479 aa19.68■□□□□ 0.74
PTPN7-207ENST00000468385 ATAD2Q6PL18 1390 aa19.67■□□□□ 0.74
PTPN7-207ENST00000468385 TECPR2O15040 1411 aa19.67■□□□□ 0.74
PTPN7-207ENST00000468385 SPATA31E1Q6ZUB1 1445 aa19.66■□□□□ 0.74
PTPN7-207ENST00000468385 WAPLQ7Z5K2 1190 aa19.65■□□□□ 0.74
PTPN7-207ENST00000468385 CCDC144AA2RUR9 1427 aa19.65■□□□□ 0.74
PTPN7-207ENST00000468385 FOXO3O43524 673 aa19.64■□□□□ 0.73
PTPN7-207ENST00000468385 XPCQ01831 940 aaPredicted RBP19.64■□□□□ 0.73
PTPN7-207ENST00000468385 LRPPRCP42704 1394 aaKnown RBP19.64■□□□□ 0.73
PTPN7-207ENST00000468385 BCL9LQ86UU0 1499 aa19.64■□□□□ 0.73
PTPN7-207ENST00000468385 PLEKHH1Q9ULM0 1364 aa19.63■□□□□ 0.73
PTPN7-207ENST00000468385 RGL3Q3MIN7 710 aa19.63■□□□□ 0.73
PTPN7-207ENST00000468385 STK26Q9P289 416 aa19.63■□□□□ 0.73
PTPN7-207ENST00000468385 IFT172Q9UG01 1749 aa19.62■□□□□ 0.73
PTPN7-207ENST00000468385 ABCC11Q96J66 1382 aa19.62■□□□□ 0.73
PTPN7-207ENST00000468385 ANKRD30BQ9BXX2 1392 aa19.62■□□□□ 0.73
PTPN7-207ENST00000468385 NUTM2FA1L443 756 aa19.62■□□□□ 0.73
PTPN7-207ENST00000468385 TMEM132EQ6IEE7 984 aa19.61■□□□□ 0.73
PTPN7-207ENST00000468385 KNDC1Q76NI1 1749 aa19.61■□□□□ 0.73
PTPN7-207ENST00000468385 PIK3C2GO75747 1445 aa19.6■□□□□ 0.73
PTPN7-207ENST00000468385 MARF1Q9Y4F3 1742 aaKnown RBP19.6■□□□□ 0.73
PTPN7-207ENST00000468385 MPHOSPH9Q99550 1183 aa19.59■□□□□ 0.73
PTPN7-207ENST00000468385 FMN2Q9NZ56 1722 aa19.57■□□□□ 0.72
PTPN7-207ENST00000468385 GJD4Q96KN9 370 aaPredicted RBP19.57■□□□□ 0.72
PTPN7-207ENST00000468385 YTHDC2Q9H6S0 1430 aaKnown RBP19.57■□□□□ 0.72
PTPN7-207ENST00000468385 SPATA31A3Q5VYP0 1347 aa19.56■□□□□ 0.72
PTPN7-207ENST00000468385 EP400Q96L91 3159 aa19.56■□□□□ 0.72
PTPN7-207ENST00000468385 SRCAPQ6ZRS2 3230 aa19.56■□□□□ 0.72
PTPN7-207ENST00000468385 SLIT2O94813 1529 aa19.55■□□□□ 0.72
PTPN7-207ENST00000468385 TNKS1BP1Q9C0C2 1729 aaKnown RBP19.54■□□□□ 0.72
PTPN7-207ENST00000468385 KIF1AQ12756 1690 aa19.54■□□□□ 0.72
PTPN7-207ENST00000468385 UNC5CLQ8IV45 518 aa19.53■□□□□ 0.72
PTPN7-207ENST00000468385 SIRT1Q96EB6 747 aa19.53■□□□□ 0.72
PTPN7-207ENST00000468385 KRT28Q7Z3Y7 464 aa19.52■□□□□ 0.72
PTPN7-207ENST00000468385 CCDC125Q86Z20 511 aa19.52■□□□□ 0.72
PTPN7-207ENST00000468385 RALGAPBQ86X10 1494 aa19.52■□□□□ 0.72
PTPN7-207ENST00000468385 GLI3P10071 1580 aa19.52■□□□□ 0.71
PTPN7-207ENST00000468385 C14orf93Q9H972 538 aaKnown RBP19.51■□□□□ 0.71
PTPN7-207ENST00000468385 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
PTPN7-207ENST00000468385 NRXN1Q9ULB1 1477 aa19.5■□□□□ 0.71
PTPN7-207ENST00000468385 ZRANB1Q9UGI0 708 aa19.5■□□□□ 0.71
PTPN7-207ENST00000468385 CFAP70Q5T0N1 1121 aa19.48■□□□□ 0.71
PTPN7-207ENST00000468385 PHF8Q9UPP1 1060 aa19.48■□□□□ 0.71
PTPN7-207ENST00000468385 TNS3Q68CZ2 1445 aa19.48■□□□□ 0.71
PTPN7-207ENST00000468385 RGPD8O14715 1765 aaPredicted RBP19.47■□□□□ 0.71
PTPN7-207ENST00000468385 DHX57Q6P158 1386 aaKnown RBP19.46■□□□□ 0.71
PTPN7-207ENST00000468385 PSME1Q06323 249 aa19.45■□□□□ 0.7
PTPN7-207ENST00000468385 CABLES1Q8TDN4 633 aa19.45■□□□□ 0.7
PTPN7-207ENST00000468385 SBNO1A3KN83 1393 aa19.44■□□□□ 0.7
PTPN7-207ENST00000468385 BLMP54132 1417 aaPredicted RBP19.44■□□□□ 0.7
PTPN7-207ENST00000468385 PRAM1Q96QH2 718 aa19.44■□□□□ 0.7
PTPN7-207ENST00000468385 HAP1P54257 671 aaPredicted RBP19.43■□□□□ 0.7
PTPN7-207ENST00000468385 SAFB2Q14151 953 aaKnown RBP eCLIP19.43■□□□□ 0.7
PTPN7-207ENST00000468385 VPS72Q15906 364 aa19.43■□□□□ 0.7
PTPN7-207ENST00000468385 BRWD3Q6RI45 1802 aa19.42■□□□□ 0.7
PTPN7-207ENST00000468385 DLC1Q96QB1 1528 aa19.42■□□□□ 0.7
PTPN7-207ENST00000468385 SEPT12Q8IYM1 358 aa19.42■□□□□ 0.7
PTPN7-207ENST00000468385 PLCH1Q4KWH8 1693 aa19.41■□□□□ 0.7
PTPN7-207ENST00000468385 PLEKHG5O94827 1062 aa19.41■□□□□ 0.7
PTPN7-207ENST00000468385 ABCA3Q99758 1704 aa19.41■□□□□ 0.7
PTPN7-207ENST00000468385 ACIN1Q9UKV3 1341 aaKnown RBP19.41■□□□□ 0.7
PTPN7-207ENST00000468385 ARHGEF10O15013 1369 aa19.41■□□□□ 0.7
PTPN7-207ENST00000468385 NWD2Q9ULI1 1742 aa19.4■□□□□ 0.7
PTPN7-207ENST00000468385 ONECUT3O60422 494 aaPredicted RBP19.4■□□□□ 0.7
PTPN7-207ENST00000468385 ANKARQ7Z5J8 1434 aa19.4■□□□□ 0.7
PTPN7-207ENST00000468385 LMOD2Q6P5Q4 547 aa19.39■□□□□ 0.69
PTPN7-207ENST00000468385 DEFB132Q7Z7B7 95 aa19.39■□□□□ 0.69
PTPN7-207ENST00000468385 PMFBP1Q8TBY8 1022 aa19.39■□□□□ 0.69
PTPN7-207ENST00000468385 ADGRB1O14514 1584 aa19.38■□□□□ 0.69
PTPN7-207ENST00000468385 ADGRB2O60241 1585 aa19.38■□□□□ 0.69
PTPN7-207ENST00000468385 POGKQ9P215 609 aa19.38■□□□□ 0.69
PTPN7-207ENST00000468385 FAM83GA6ND36 823 aa19.37■□□□□ 0.69
PTPN7-207ENST00000468385 CCDC9Q9Y3X0 531 aaKnown RBP19.36■□□□□ 0.69
PTPN7-207ENST00000468385 TRPM3Q9HCF6 1732 aaPredicted RBP19.35■□□□□ 0.69
PTPN7-207ENST00000468385 KRT27Q7Z3Y8 459 aa19.35■□□□□ 0.69
PTPN7-207ENST00000468385 TRAK1Q9UPV9 953 aa19.34■□□□□ 0.69
PTPN7-207ENST00000468385 NRAPQ86VF7 1730 aa19.34■□□□□ 0.69
PTPN7-207ENST00000468385 PRR36Q9H6K5 1346 aa19.33■□□□□ 0.69
PTPN7-207ENST00000468385 SF3B2Q13435 895 aaKnown RBP19.33■□□□□ 0.68
PTPN7-207ENST00000468385 HIRIP3Q9BW71 556 aaPredicted RBP19.33■□□□□ 0.68
PTPN7-207ENST00000468385 RAB3GAP2Q9H2M9 1393 aa19.32■□□□□ 0.68
PTPN7-207ENST00000468385 ALS2Q96Q42 1657 aa19.32■□□□□ 0.68
PTPN7-207ENST00000468385 BTG4Q9NY30 223 aa19.31■□□□□ 0.68
PTPN7-207ENST00000468385 TULP4Q9NRJ4 1543 aa19.3■□□□□ 0.68
PTPN7-207ENST00000468385 MINK1Q8N4C8 1332 aaPredicted RBP19.3■□□□□ 0.68
PTPN7-207ENST00000468385 EIF3AQ14152 1382 aaKnown RBP19.3■□□□□ 0.68
PTPN7-207ENST00000468385 GPRASP1Q5JY77 1395 aa19.3■□□□□ 0.68
PTPN7-207ENST00000468385 WASLO00401 505 aaPredicted RBP19.29■□□□□ 0.68
PTPN7-207ENST00000468385 FAM98CQ17RN3 349 aaKnown RBP19.29■□□□□ 0.68
PTPN7-207ENST00000468385 COL14A1Q05707 1796 aaKnown RBP19.29■□□□□ 0.68
PTPN7-207ENST00000468385 A0A0G2JS52 829 aa19.27■□□□□ 0.68
PTPN7-207ENST00000468385 MYT1Q01538 1121 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms