RNA–Protein interactions for RNA: ENST00000467302.5

PRPF38B-204, Transcript of pre-mRNA processing factor 38B, humanhuman

TSL 1 (best)

Gene PRPF38B, Length 2,043 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38B-204ENST00000467302 BACH2Q9BYV9 841 aa19.41■□□□□ 0.7
PRPF38B-204ENST00000467302 MLECQ14165 292 aa19.41■□□□□ 0.7
PRPF38B-204ENST00000467302 NBR1Q14596 966 aa19.41■□□□□ 0.7
PRPF38B-204ENST00000467302 AMER1Q5JTC6 1135 aaPredicted RBP19.4■□□□□ 0.7
PRPF38B-204ENST00000467302 NPC1L1Q9UHC9 1359 aa19.4■□□□□ 0.7
PRPF38B-204ENST00000467302 PPP2R1AP30153 589 aa19.39■□□□□ 0.69
PRPF38B-204ENST00000467302 A2ML1A8K2U0 1454 aa19.39■□□□□ 0.69
PRPF38B-204ENST00000467302 ESF1Q9H501 851 aaKnown RBP19.39■□□□□ 0.69
PRPF38B-204ENST00000467302 CRBNQ96SW2 442 aa19.38■□□□□ 0.69
PRPF38B-204ENST00000467302 STAG3Q9UJ98 1225 aa19.37■□□□□ 0.69
PRPF38B-204ENST00000467302 ZNF521Q96K83 1311 aa19.36■□□□□ 0.69
PRPF38B-204ENST00000467302 ZMYM3Q14202 1370 aa19.36■□□□□ 0.69
PRPF38B-204ENST00000467302 PLEKHH1Q9ULM0 1364 aa19.36■□□□□ 0.69
PRPF38B-204ENST00000467302 ALKQ9UM73 1620 aa19.35■□□□□ 0.69
PRPF38B-204ENST00000467302 DUSP27Q5VZP5 1158 aa19.34■□□□□ 0.69
PRPF38B-204ENST00000467302 TULP4Q9NRJ4 1543 aa19.33■□□□□ 0.68
PRPF38B-204ENST00000467302 RIMS2Q9UQ26 1411 aa19.33■□□□□ 0.68
PRPF38B-204ENST00000467302 C20orf194Q5TEA3 1177 aa19.32■□□□□ 0.68
PRPF38B-204ENST00000467302 PUS7Q96PZ0 661 aaKnown RBP19.32■□□□□ 0.68
PRPF38B-204ENST00000467302 WDR43Q15061 677 aaKnown RBP eCLIP19.32■□□□□ 0.68
PRPF38B-204ENST00000467302 NPM2Q86SE8 214 aaKnown RBP19.31■□□□□ 0.68
PRPF38B-204ENST00000467302 PTPRMP28827 1452 aa19.31■□□□□ 0.68
PRPF38B-204ENST00000467302 KDM2BQ8NHM5 1336 aa19.31■□□□□ 0.68
PRPF38B-204ENST00000467302 SETD1AO15047 1707 aaKnown RBP19.31■□□□□ 0.68
PRPF38B-204ENST00000467302 YTHDC2Q9H6S0 1430 aaKnown RBP19.31■□□□□ 0.68
PRPF38B-204ENST00000467302 EVC2Q86UK5 1308 aa19.3■□□□□ 0.68
PRPF38B-204ENST00000467302 USP32Q8NFA0 1604 aa19.3■□□□□ 0.68
PRPF38B-204ENST00000467302 TNRQ92752 1358 aa19.3■□□□□ 0.68
PRPF38B-204ENST00000467302 CARD14Q9BXL6 1004 aa19.29■□□□□ 0.68
PRPF38B-204ENST00000467302 GOLGA2Q08379 1002 aa19.28■□□□□ 0.68
PRPF38B-204ENST00000467302 SENP3Q9H4L4 574 aaPredicted RBP19.27■□□□□ 0.68
PRPF38B-204ENST00000467302 DLC1Q96QB1 1528 aa19.27■□□□□ 0.68
PRPF38B-204ENST00000467302 UBR1Q8IWV7 1749 aa19.27■□□□□ 0.67
PRPF38B-204ENST00000467302 STK26Q9P289 416 aa19.27■□□□□ 0.67
PRPF38B-204ENST00000467302 RTL5Q5HYW3 569 aaPredicted RBP19.26■□□□□ 0.67
PRPF38B-204ENST00000467302 SKAP1Q86WV1 359 aa19.26■□□□□ 0.67
PRPF38B-204ENST00000467302 TRMT2AQ8IZ69 625 aaKnown RBP19.26■□□□□ 0.67
PRPF38B-204ENST00000467302 NRXN3Q9Y4C0 1643 aa19.26■□□□□ 0.67
PRPF38B-204ENST00000467302 SLFN5Q08AF3 891 aa19.25■□□□□ 0.67
PRPF38B-204ENST00000467302 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.25■□□□□ 0.67
PRPF38B-204ENST00000467302 NINLQ9Y2I6 1382 aa19.24■□□□□ 0.67
PRPF38B-204ENST00000467302 SLC12A5Q9H2X9 1139 aa19.24■□□□□ 0.67
PRPF38B-204ENST00000467302 NSD3Q9BZ95 1437 aa19.24■□□□□ 0.67
PRPF38B-204ENST00000467302 CENPQQ7L2Z9 268 aaPredicted RBP19.24■□□□□ 0.67
PRPF38B-204ENST00000467302 FER1L4A9Z1Z3 1794 aa19.23■□□□□ 0.67
PRPF38B-204ENST00000467302 NLRP1Q9C000 1473 aa19.22■□□□□ 0.67
PRPF38B-204ENST00000467302 SAFB2Q14151 953 aaKnown RBP eCLIP19.21■□□□□ 0.67
PRPF38B-204ENST00000467302 C3P01024 1663 aa19.21■□□□□ 0.67
PRPF38B-204ENST00000467302 ANKRD36BQ8N2N9 1353 aa19.21■□□□□ 0.67
PRPF38B-204ENST00000467302 HDGFP51858 240 aaKnown RBP19.2■□□□□ 0.66
PRPF38B-204ENST00000467302 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.2■□□□□ 0.66
PRPF38B-204ENST00000467302 KNDC1Q76NI1 1749 aa19.2■□□□□ 0.66
PRPF38B-204ENST00000467302 TRHP20396 242 aaPredicted RBP19.2■□□□□ 0.66
PRPF38B-204ENST00000467302 PRAM1Q96QH2 718 aa19.2■□□□□ 0.66
PRPF38B-204ENST00000467302 POGKQ9P215 609 aa19.19■□□□□ 0.66
PRPF38B-204ENST00000467302 ATAD2Q6PL18 1390 aa19.19■□□□□ 0.66
PRPF38B-204ENST00000467302 USP35Q9P2H5 1018 aa19.18■□□□□ 0.66
PRPF38B-204ENST00000467302 TMEM2Q9UHN6 1383 aa19.18■□□□□ 0.66
PRPF38B-204ENST00000467302 CABP2Q9NPB3 220 aa19.18■□□□□ 0.66
PRPF38B-204ENST00000467302 SPINK5Q9NQ38 1064 aaPredicted RBP19.18■□□□□ 0.66
PRPF38B-204ENST00000467302 CCDC146Q8IYE0 955 aa19.17■□□□□ 0.66
PRPF38B-204ENST00000467302 DDRGK1Q96HY6 314 aa19.17■□□□□ 0.66
PRPF38B-204ENST00000467302 ABCC11Q96J66 1382 aa19.17■□□□□ 0.66
PRPF38B-204ENST00000467302 NKTRP30414 1462 aaKnown RBP19.16■□□□□ 0.66
PRPF38B-204ENST00000467302 NSD2O96028 1365 aa19.16■□□□□ 0.66
PRPF38B-204ENST00000467302 APAF1O14727 1248 aa19.16■□□□□ 0.66
PRPF38B-204ENST00000467302 LAS1LQ9Y4W2 734 aaKnown RBP19.15■□□□□ 0.66
PRPF38B-204ENST00000467302 SRPK2P78362 688 aaKnown RBP19.15■□□□□ 0.66
PRPF38B-204ENST00000467302 MORC1Q86VD1 984 aa19.15■□□□□ 0.66
PRPF38B-204ENST00000467302 NGEFQ8N5V2 710 aa19.15■□□□□ 0.66
PRPF38B-204ENST00000467302 CGNL1Q0VF96 1302 aa19.15■□□□□ 0.66
PRPF38B-204ENST00000467302 MINK1Q8N4C8 1332 aaPredicted RBP19.15■□□□□ 0.66
PRPF38B-204ENST00000467302 PPM1GO15355 546 aaPredicted RBP19.14■□□□□ 0.65
PRPF38B-204ENST00000467302 E9PSI1 815 aa19.13■□□□□ 0.65
PRPF38B-204ENST00000467302 CPS1P31327 1500 aa19.13■□□□□ 0.65
PRPF38B-204ENST00000467302 NEFMP07197 916 aa19.13■□□□□ 0.65
PRPF38B-204ENST00000467302 C8orf34Q49A92 452 aa19.13■□□□□ 0.65
PRPF38B-204ENST00000467302 TECPR2O15040 1411 aa19.13■□□□□ 0.65
PRPF38B-204ENST00000467302 FAM161AQ3B820 660 aa19.12■□□□□ 0.65
PRPF38B-204ENST00000467302 A0A1W2PP64 1363 aa19.11■□□□□ 0.65
PRPF38B-204ENST00000467302 POLR3AO14802 1390 aaPredicted RBP19.11■□□□□ 0.65
PRPF38B-204ENST00000467302 FAM135BQ49AJ0 1406 aa19.1■□□□□ 0.65
PRPF38B-204ENST00000467302 METP08581 1390 aa19.1■□□□□ 0.65
PRPF38B-204ENST00000467302 ANKRD26Q9UPS8 1709 aa19.1■□□□□ 0.65
PRPF38B-204ENST00000467302 PLEKHG1Q9ULL1 1385 aa19.09■□□□□ 0.65
PRPF38B-204ENST00000467302 BCAR3O75815 825 aa19.09■□□□□ 0.65
PRPF38B-204ENST00000467302 DMRT2Q9Y5R5 561 aa19.09■□□□□ 0.65
PRPF38B-204ENST00000467302 SLIT1O75093 1534 aa19.09■□□□□ 0.65
PRPF38B-204ENST00000467302 CDK19Q9BWU1 502 aa19.08■□□□□ 0.65
PRPF38B-204ENST00000467302 CD163L1Q9NR16 1453 aa19.08■□□□□ 0.65
PRPF38B-204ENST00000467302 SIRT1Q96EB6 747 aa19.08■□□□□ 0.64
PRPF38B-204ENST00000467302 TERF2IPQ9NYB0 399 aa19.08■□□□□ 0.64
PRPF38B-204ENST00000467302 ARHGAP23Q9P227 1491 aa19.07■□□□□ 0.64
PRPF38B-204ENST00000467302 ADAMTS13Q76LX8 1427 aa19.07■□□□□ 0.64
PRPF38B-204ENST00000467302 TNNT2P45379 298 aaPredicted RBP19.07■□□□□ 0.64
PRPF38B-204ENST00000467302 CEBPAP49715 358 aaPredicted RBP19.07■□□□□ 0.64
PRPF38B-204ENST00000467302 SHPRHQ149N8 1683 aa19.06■□□□□ 0.64
PRPF38B-204ENST00000467302 MED14O60244 1454 aa19.06■□□□□ 0.64
PRPF38B-204ENST00000467302 ATP7BP35670 1465 aa19.06■□□□□ 0.64
PRPF38B-204ENST00000467302 WAPLQ7Z5K2 1190 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 96.5 ms