RNA–Protein interactions for RNA: ENST00000467152.1

PDE6B-206, Transcript of phosphodiesterase 6B, humanhuman

TSL 1 (best)

Gene PDE6B, Length 545 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-206ENST00000467152 COL22A1Q8NFW1 1626 aaPredicted RBP27.09■■□□□ 1.93
PDE6B-206ENST00000467152 UPF1Q92900 1129 aaKnown RBP eCLIP27.07■■□□□ 1.92
PDE6B-206ENST00000467152 KNDC1Q76NI1 1749 aa27.07■■□□□ 1.92
PDE6B-206ENST00000467152 DDX17Q92841 729 aaKnown RBP27.05■■□□□ 1.92
PDE6B-206ENST00000467152 DHX57Q6P158 1386 aaKnown RBP27.05■■□□□ 1.92
PDE6B-206ENST00000467152 DCAF11Q8TEB1 546 aa27.04■■□□□ 1.92
PDE6B-206ENST00000467152 SOS2Q07890 1332 aaPredicted RBP27.04■■□□□ 1.92
PDE6B-206ENST00000467152 PIK3C2GO75747 1445 aa27.03■■□□□ 1.92
PDE6B-206ENST00000467152 C8orf37Q96NL8 207 aa27.03■■□□□ 1.92
PDE6B-206ENST00000467152 C14orf93Q9H972 538 aaKnown RBP27.03■■□□□ 1.92
PDE6B-206ENST00000467152 KDM2AQ9Y2K7 1162 aa27.03■■□□□ 1.92
PDE6B-206ENST00000467152 MARF1Q9Y4F3 1742 aaKnown RBP27.03■■□□□ 1.92
PDE6B-206ENST00000467152 NRXN1Q9ULB1 1477 aa27.02■■□□□ 1.92
PDE6B-206ENST00000467152 STAC3Q96MF2 364 aa27.02■■□□□ 1.92
PDE6B-206ENST00000467152 MYOM2P54296 1465 aa27.01■■□□□ 1.91
PDE6B-206ENST00000467152 RGS12O14924 1447 aa27.01■■□□□ 1.91
PDE6B-206ENST00000467152 SIN3AQ96ST3 1273 aa27■■□□□ 1.91
PDE6B-206ENST00000467152 TECPR2O15040 1411 aa26.99■■□□□ 1.91
PDE6B-206ENST00000467152 RBM6P78332 1123 aaKnown RBP26.99■■□□□ 1.91
PDE6B-206ENST00000467152 CFAP70Q5T0N1 1121 aa26.99■■□□□ 1.91
PDE6B-206ENST00000467152 TMEM132EQ6IEE7 984 aa26.99■■□□□ 1.91
PDE6B-206ENST00000467152 ORAI2Q96SN7 254 aa26.98■■□□□ 1.91
PDE6B-206ENST00000467152 PCGF6Q9BYE7 350 aa26.96■■□□□ 1.91
PDE6B-206ENST00000467152 QTRT2Q9H974 415 aaKnown RBP26.96■■□□□ 1.91
PDE6B-206ENST00000467152 NGLY1Q96IV0 654 aa26.95■■□□□ 1.9
PDE6B-206ENST00000467152 FMN2Q9NZ56 1722 aa26.95■■□□□ 1.9
PDE6B-206ENST00000467152 STK26Q9P289 416 aa26.94■■□□□ 1.9
PDE6B-206ENST00000467152 KIF1AQ12756 1690 aa26.94■■□□□ 1.9
PDE6B-206ENST00000467152 PXDNQ92626 1479 aa26.93■■□□□ 1.9
PDE6B-206ENST00000467152 NPHP3Q7Z494 1330 aa26.93■■□□□ 1.9
PDE6B-206ENST00000467152 LRPPRCP42704 1394 aaKnown RBP26.93■■□□□ 1.9
PDE6B-206ENST00000467152 ADAMTS2O95450 1211 aa26.92■■□□□ 1.9
PDE6B-206ENST00000467152 NEUROD1Q13562 356 aa26.92■■□□□ 1.9
PDE6B-206ENST00000467152 ABCC11Q96J66 1382 aa26.91■■□□□ 1.9
PDE6B-206ENST00000467152 TNKS1BP1Q9C0C2 1729 aaKnown RBP26.9■■□□□ 1.9
PDE6B-206ENST00000467152 L3MBTL2Q969R5 705 aa26.88■■□□□ 1.89
PDE6B-206ENST00000467152 YTHDC2Q9H6S0 1430 aaKnown RBP26.88■■□□□ 1.89
PDE6B-206ENST00000467152 USP21Q9UK80 565 aa26.87■■□□□ 1.89
PDE6B-206ENST00000467152 ATRNO75882 1429 aa26.86■■□□□ 1.89
PDE6B-206ENST00000467152 ESCO1Q5FWF5 840 aa26.86■■□□□ 1.89
PDE6B-206ENST00000467152 WAPLQ7Z5K2 1190 aa26.86■■□□□ 1.89
PDE6B-206ENST00000467152 FNBP4Q8N3X1 1017 aaPredicted RBP26.86■■□□□ 1.89
PDE6B-206ENST00000467152 SIRT1Q96EB6 747 aa26.86■■□□□ 1.89
PDE6B-206ENST00000467152 TRPC5Q9UL62 973 aaPredicted RBP26.86■■□□□ 1.89
PDE6B-206ENST00000467152 ATAD2Q6PL18 1390 aa26.85■■□□□ 1.89
PDE6B-206ENST00000467152 RGPD8O14715 1765 aaPredicted RBP26.81■■□□□ 1.88
PDE6B-206ENST00000467152 ADGRB1O14514 1584 aa26.8■■□□□ 1.88
PDE6B-206ENST00000467152 PLEKHH1Q9ULM0 1364 aa26.79■■□□□ 1.88
PDE6B-206ENST00000467152 EP400Q96L91 3159 aa26.78■■□□□ 1.88
PDE6B-206ENST00000467152 FOXO3O43524 673 aa26.78■■□□□ 1.88
PDE6B-206ENST00000467152 USP32Q8NFA0 1604 aa26.78■■□□□ 1.88
PDE6B-206ENST00000467152 BCL9LQ86UU0 1499 aa26.77■■□□□ 1.88
PDE6B-206ENST00000467152 TRAK1Q9UPV9 953 aa26.76■■□□□ 1.87
PDE6B-206ENST00000467152 NBPF1Q3BBV0 1214 aa26.75■■□□□ 1.87
PDE6B-206ENST00000467152 ABCA3Q99758 1704 aa26.74■■□□□ 1.87
PDE6B-206ENST00000467152 PRAM1Q96QH2 718 aa26.74■■□□□ 1.87
PDE6B-206ENST00000467152 XPCQ01831 940 aaPredicted RBP26.72■■□□□ 1.87
PDE6B-206ENST00000467152 NWD2Q9ULI1 1742 aa26.72■■□□□ 1.87
PDE6B-206ENST00000467152 NUTM2FA1L443 756 aa26.71■■□□□ 1.87
PDE6B-206ENST00000467152 ADGRB2O60241 1585 aa26.71■■□□□ 1.87
PDE6B-206ENST00000467152 DLC1Q96QB1 1528 aa26.7■■□□□ 1.87
PDE6B-206ENST00000467152 SPATA31A3Q5VYP0 1347 aa26.7■■□□□ 1.87
PDE6B-206ENST00000467152 PLCH1Q4KWH8 1693 aa26.7■■□□□ 1.87
PDE6B-206ENST00000467152 POGKQ9P215 609 aa26.7■■□□□ 1.86
PDE6B-206ENST00000467152 SLIT2O94813 1529 aa26.7■■□□□ 1.86
PDE6B-206ENST00000467152 SAFB2Q14151 953 aaKnown RBP eCLIP26.69■■□□□ 1.86
PDE6B-206ENST00000467152 TNS3Q68CZ2 1445 aa26.69■■□□□ 1.86
PDE6B-206ENST00000467152 GLI3P10071 1580 aa26.68■■□□□ 1.86
PDE6B-206ENST00000467152 KIAA1210Q9ULL0 1709 aa26.68■■□□□ 1.86
PDE6B-206ENST00000467152 NBPF8Q3BBV2 869 aa26.66■■□□□ 1.86
PDE6B-206ENST00000467152 BRWD3Q6RI45 1802 aa26.65■■□□□ 1.86
PDE6B-206ENST00000467152 GJD4Q96KN9 370 aaPredicted RBP26.65■■□□□ 1.86
PDE6B-206ENST00000467152 TONSLQ96HA7 1378 aa26.64■■□□□ 1.86
PDE6B-206ENST00000467152 ANKARQ7Z5J8 1434 aa26.64■■□□□ 1.85
PDE6B-206ENST00000467152 RALGAPBQ86X10 1494 aa26.63■■□□□ 1.85
PDE6B-206ENST00000467152 KRT28Q7Z3Y7 464 aa26.63■■□□□ 1.85
PDE6B-206ENST00000467152 CCDC125Q86Z20 511 aa26.63■■□□□ 1.85
PDE6B-206ENST00000467152 SBNO1A3KN83 1393 aa26.62■■□□□ 1.85
PDE6B-206ENST00000467152 UNC5CLQ8IV45 518 aa26.62■■□□□ 1.85
PDE6B-206ENST00000467152 PHF8Q9UPP1 1060 aa26.62■■□□□ 1.85
PDE6B-206ENST00000467152 PSME1Q06323 249 aa26.61■■□□□ 1.85
PDE6B-206ENST00000467152 ARHGEF10O15013 1369 aa26.6■■□□□ 1.85
PDE6B-206ENST00000467152 TRPM3Q9HCF6 1732 aaPredicted RBP26.6■■□□□ 1.85
PDE6B-206ENST00000467152 CLSPNQ9HAW4 1339 aa26.6■■□□□ 1.85
PDE6B-206ENST00000467152 MINK1Q8N4C8 1332 aaPredicted RBP26.59■■□□□ 1.85
PDE6B-206ENST00000467152 SRCAPQ6ZRS2 3230 aa26.57■■□□□ 1.84
PDE6B-206ENST00000467152 HIRIP3Q9BW71 556 aaPredicted RBP26.57■■□□□ 1.84
PDE6B-206ENST00000467152 ALS2Q96Q42 1657 aa26.57■■□□□ 1.84
PDE6B-206ENST00000467152 HAP1P54257 671 aaPredicted RBP26.56■■□□□ 1.84
PDE6B-206ENST00000467152 EIF3AQ14152 1382 aaKnown RBP26.56■■□□□ 1.84
PDE6B-206ENST00000467152 ITSN1Q15811 1721 aa26.55■■□□□ 1.84
PDE6B-206ENST00000467152 NRAPQ86VF7 1730 aa26.55■■□□□ 1.84
PDE6B-206ENST00000467152 TRPM1Q7Z4N2 1603 aa26.54■■□□□ 1.84
PDE6B-206ENST00000467152 ARHGEF28Q8N1W1 1705 aaKnown RBP26.53■■□□□ 1.84
PDE6B-206ENST00000467152 WASLO00401 505 aaPredicted RBP26.53■■□□□ 1.84
PDE6B-206ENST00000467152 ZRANB1Q9UGI0 708 aa26.53■■□□□ 1.84
PDE6B-206ENST00000467152 BLMP54132 1417 aaPredicted RBP26.53■■□□□ 1.84
PDE6B-206ENST00000467152 TULP4Q9NRJ4 1543 aa26.53■■□□□ 1.84
PDE6B-206ENST00000467152 ROCK2O75116 1388 aaKnown RBP26.52■■□□□ 1.84
PDE6B-206ENST00000467152 CCER1Q8TC90 406 aaPredicted RBP26.52■■□□□ 1.84
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms