RNA–Protein interactions for RNA: ENST00000466901.5

COPS7B-218, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 3

Gene COPS7B, Length 598 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-218ENST00000466901 PHLPP1O60346 1717 aa11.26□□□□□ -0.61
COPS7B-218ENST00000466901 SAFB2Q14151 953 aaKnown RBP eCLIP11.25□□□□□ -0.61
COPS7B-218ENST00000466901 DLC1Q96QB1 1528 aa11.25□□□□□ -0.61
COPS7B-218ENST00000466901 KIAA1210Q9ULL0 1709 aa11.24□□□□□ -0.61
COPS7B-218ENST00000466901 C1orf167Q5SNV9 1468 aa11.24□□□□□ -0.61
COPS7B-218ENST00000466901 CDC42BPGQ6DT37 1551 aa11.24□□□□□ -0.61
COPS7B-218ENST00000466901 TONSLQ96HA7 1378 aa11.23□□□□□ -0.61
COPS7B-218ENST00000466901 DISP3Q9P2K9 1392 aa11.23□□□□□ -0.61
COPS7B-218ENST00000466901 NUTM2FA1L443 756 aa11.22□□□□□ -0.61
COPS7B-218ENST00000466901 NBPF1Q3BBV0 1214 aa11.22□□□□□ -0.61
COPS7B-218ENST00000466901 ESCO1Q5FWF5 840 aa11.22□□□□□ -0.61
COPS7B-218ENST00000466901 AHDC1Q5TGY3 1603 aaPredicted RBP11.22□□□□□ -0.61
COPS7B-218ENST00000466901 ORAI2Q96SN7 254 aa11.22□□□□□ -0.61
COPS7B-218ENST00000466901 JCADQ9P266 1359 aa11.21□□□□□ -0.61
COPS7B-218ENST00000466901 COL16A1Q07092 1604 aaPredicted RBP11.2□□□□□ -0.62
COPS7B-218ENST00000466901 MINK1Q8N4C8 1332 aaPredicted RBP11.2□□□□□ -0.62
COPS7B-218ENST00000466901 DDX17Q92841 729 aaKnown RBP11.2□□□□□ -0.62
COPS7B-218ENST00000466901 HIRIP3Q9BW71 556 aaPredicted RBP11.2□□□□□ -0.62
COPS7B-218ENST00000466901 ARHGEF28Q8N1W1 1705 aaKnown RBP11.2□□□□□ -0.62
COPS7B-218ENST00000466901 FMN2Q9NZ56 1722 aa11.2□□□□□ -0.62
COPS7B-218ENST00000466901 NHSL1Q5SYE7 1610 aa11.2□□□□□ -0.62
COPS7B-218ENST00000466901 LRRC59Q96AG4 307 aaKnown RBP11.19□□□□□ -0.62
COPS7B-218ENST00000466901 MED1Q15648 1581 aaPredicted RBP11.19□□□□□ -0.62
COPS7B-218ENST00000466901 ROCK2O75116 1388 aaKnown RBP11.17□□□□□ -0.62
COPS7B-218ENST00000466901 TRPM1Q7Z4N2 1603 aa11.17□□□□□ -0.62
COPS7B-218ENST00000466901 NPHP3Q7Z494 1330 aa11.17□□□□□ -0.62
COPS7B-218ENST00000466901 WASLO00401 505 aaPredicted RBP11.17□□□□□ -0.62
COPS7B-218ENST00000466901 FOXO3O43524 673 aa11.17□□□□□ -0.62
COPS7B-218ENST00000466901 NBPF8Q3BBV2 869 aa11.17□□□□□ -0.62
COPS7B-218ENST00000466901 PHF23Q9BUL5 403 aaPredicted RBP11.17□□□□□ -0.62
COPS7B-218ENST00000466901 RGPD8O14715 1765 aaPredicted RBP11.17□□□□□ -0.62
COPS7B-218ENST00000466901 EIF3AQ14152 1382 aaKnown RBP11.16□□□□□ -0.62
COPS7B-218ENST00000466901 ADGRB2O60241 1585 aa11.16□□□□□ -0.62
COPS7B-218ENST00000466901 SOS2Q07890 1332 aaPredicted RBP11.16□□□□□ -0.62
COPS7B-218ENST00000466901 SPATA31A6Q5VVP1 1343 aa11.16□□□□□ -0.62
COPS7B-218ENST00000466901 CLSPNQ9HAW4 1339 aa11.16□□□□□ -0.62
COPS7B-218ENST00000466901 CENPJQ9HC77 1338 aaPredicted RBP11.15□□□□□ -0.62
COPS7B-218ENST00000466901 SHPRHQ149N8 1683 aa11.15□□□□□ -0.62
COPS7B-218ENST00000466901 PHF8Q9UPP1 1060 aa11.15□□□□□ -0.62
COPS7B-218ENST00000466901 ANKARQ7Z5J8 1434 aa11.15□□□□□ -0.62
COPS7B-218ENST00000466901 KIF1AQ12756 1690 aa11.14□□□□□ -0.63
COPS7B-218ENST00000466901 XPCQ01831 940 aaPredicted RBP11.14□□□□□ -0.63
COPS7B-218ENST00000466901 CCER1Q8TC90 406 aaPredicted RBP11.14□□□□□ -0.63
COPS7B-218ENST00000466901 CDK19Q9BWU1 502 aa11.14□□□□□ -0.63
COPS7B-218ENST00000466901 NUTM2BA6NNL0 878 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-218ENST00000466901 NUTM2EB1AL46 878 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-218ENST00000466901 PSME1Q06323 249 aa11.13□□□□□ -0.63
COPS7B-218ENST00000466901 MEX3CQ5U5Q3 659 aaKnown RBP11.13□□□□□ -0.63
COPS7B-218ENST00000466901 NUTM2AQ8IVF1 878 aaPredicted RBP11.13□□□□□ -0.63
COPS7B-218ENST00000466901 PMFBP1Q8TBY8 1022 aa11.13□□□□□ -0.63
COPS7B-218ENST00000466901 CARD11Q9BXL7 1154 aa11.13□□□□□ -0.63
COPS7B-218ENST00000466901 TULP4Q9NRJ4 1543 aa11.13□□□□□ -0.63
COPS7B-218ENST00000466901 USP32Q8NFA0 1604 aa11.13□□□□□ -0.63
COPS7B-218ENST00000466901 KRT28Q7Z3Y7 464 aa11.12□□□□□ -0.63
COPS7B-218ENST00000466901 NUDT16Q96DE0 195 aaKnown RBP11.12□□□□□ -0.63
COPS7B-218ENST00000466901 TIMELESSQ9UNS1 1208 aa11.12□□□□□ -0.63
COPS7B-218ENST00000466901 GPRASP1Q5JY77 1395 aa11.12□□□□□ -0.63
COPS7B-218ENST00000466901 PNPLA6Q8IY17 1366 aa11.12□□□□□ -0.63
COPS7B-218ENST00000466901 PXDNQ92626 1479 aa11.12□□□□□ -0.63
COPS7B-218ENST00000466901 PRR36Q9H6K5 1346 aa11.11□□□□□ -0.63
COPS7B-218ENST00000466901 SRPK2P78362 688 aaKnown RBP11.11□□□□□ -0.63
COPS7B-218ENST00000466901 RALGAPBQ86X10 1494 aa11.11□□□□□ -0.63
COPS7B-218ENST00000466901 QRICH2Q9H0J4 1663 aa11.11□□□□□ -0.63
COPS7B-218ENST00000466901 NGDNQ8NEJ9 315 aaKnown RBP11.1□□□□□ -0.63
COPS7B-218ENST00000466901 LRP6O75581 1613 aa11.09□□□□□ -0.63
COPS7B-218ENST00000466901 ITSN1Q15811 1721 aa11.09□□□□□ -0.63
COPS7B-218ENST00000466901 CCDC61Q9Y6R9 512 aa11.09□□□□□ -0.63
COPS7B-218ENST00000466901 SPATA31A3Q5VYP0 1347 aa11.09□□□□□ -0.63
COPS7B-218ENST00000466901 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
COPS7B-218ENST00000466901 ATP7BP35670 1465 aa11.08□□□□□ -0.64
COPS7B-218ENST00000466901 LMOD2Q6P5Q4 547 aa11.08□□□□□ -0.64
COPS7B-218ENST00000466901 ILDR2Q71H61 639 aa11.08□□□□□ -0.64
COPS7B-218ENST00000466901 CABP2Q9NPB3 220 aa11.08□□□□□ -0.64
COPS7B-218ENST00000466901 SBNO1A3KN83 1393 aa11.07□□□□□ -0.64
COPS7B-218ENST00000466901 ADAMTS2O95450 1211 aa11.07□□□□□ -0.64
COPS7B-218ENST00000466901 RGS17Q9UGC6 210 aaPredicted RBP11.07□□□□□ -0.64
COPS7B-218ENST00000466901 COL22A1Q8NFW1 1626 aaPredicted RBP11.06□□□□□ -0.64
COPS7B-218ENST00000466901 PLEKHG3A1L390 1219 aa11.06□□□□□ -0.64
COPS7B-218ENST00000466901 C8orf37Q96NL8 207 aa11.06□□□□□ -0.64
COPS7B-218ENST00000466901 TNS3Q68CZ2 1445 aa11.06□□□□□ -0.64
COPS7B-218ENST00000466901 ARHGEF10O15013 1369 aa11.05□□□□□ -0.64
COPS7B-218ENST00000466901 PAK3O75914 559 aaPredicted RBP11.05□□□□□ -0.64
COPS7B-218ENST00000466901 ZNF772Q68DY9 489 aaPredicted RBP11.05□□□□□ -0.64
COPS7B-218ENST00000466901 NGLY1Q96IV0 654 aa11.05□□□□□ -0.64
COPS7B-218ENST00000466901 ACEP12821 1306 aa11.05□□□□□ -0.64
COPS7B-218ENST00000466901 TOPAZ1Q8N9V7 1692 aa11.04□□□□□ -0.64
COPS7B-218ENST00000466901 SBNO2Q9Y2G9 1366 aa11.04□□□□□ -0.64
COPS7B-218ENST00000466901 PPIP5K1Q6PFW1 1433 aa11.04□□□□□ -0.64
COPS7B-218ENST00000466901 HAP1P54257 671 aaPredicted RBP11.04□□□□□ -0.64
COPS7B-218ENST00000466901 CABP1Q9NZU7 370 aa11.04□□□□□ -0.64
COPS7B-218ENST00000466901 POLR3AO14802 1390 aaPredicted RBP11.03□□□□□ -0.64
COPS7B-218ENST00000466901 ST20-MTHFSA0A0A6YYL1 179 aa11.03□□□□□ -0.64
COPS7B-218ENST00000466901 SLC24A1O60721 1099 aa11.03□□□□□ -0.64
COPS7B-218ENST00000466901 PLEKHG5O94827 1062 aa11.03□□□□□ -0.64
COPS7B-218ENST00000466901 POTEAQ6S8J7 498 aa11.03□□□□□ -0.64
COPS7B-218ENST00000466901 TRPM3Q9HCF6 1732 aaPredicted RBP11.03□□□□□ -0.64
COPS7B-218ENST00000466901 AFF2P51816 1311 aa11.03□□□□□ -0.64
COPS7B-218ENST00000466901 CABLES1Q8TDN4 633 aa11.02□□□□□ -0.65
COPS7B-218ENST00000466901 ATAD2Q6PL18 1390 aa11.02□□□□□ -0.65
COPS7B-218ENST00000466901 ALS2Q96Q42 1657 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms