RNA–Protein interactions for RNA: ENST00000466613.2

SDHB-203, Transcript of succinate dehydrogenase complex iron sulfur subunit B, humanhuman

TSL 2

Gene SDHB, Length 828 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHB-203ENST00000466613 WAPLQ7Z5K2 1190 aa24.4■■□□□ 1.5
SDHB-203ENST00000466613 PLEKHH1Q9ULM0 1364 aa24.4■■□□□ 1.5
SDHB-203ENST00000466613 DHX57Q6P158 1386 aaKnown RBP24.39■■□□□ 1.49
SDHB-203ENST00000466613 DDX17Q92841 729 aaKnown RBP24.38■■□□□ 1.49
SDHB-203ENST00000466613 LRRC59Q96AG4 307 aaKnown RBP24.37■■□□□ 1.49
SDHB-203ENST00000466613 ORAI2Q96SN7 254 aa24.37■■□□□ 1.49
SDHB-203ENST00000466613 FMN2Q9NZ56 1722 aa24.37■■□□□ 1.49
SDHB-203ENST00000466613 SIRT1Q96EB6 747 aa24.36■■□□□ 1.49
SDHB-203ENST00000466613 ADGRB1O14514 1584 aa24.35■■□□□ 1.49
SDHB-203ENST00000466613 DCAF11Q8TEB1 546 aa24.34■■□□□ 1.49
SDHB-203ENST00000466613 DLC1Q96QB1 1528 aa24.34■■□□□ 1.49
SDHB-203ENST00000466613 STAC3Q96MF2 364 aa24.33■■□□□ 1.49
SDHB-203ENST00000466613 MEX3CQ5U5Q3 659 aaKnown RBP24.32■■□□□ 1.48
SDHB-203ENST00000466613 POTEAQ6S8J7 498 aa24.32■■□□□ 1.48
SDHB-203ENST00000466613 KDM2AQ9Y2K7 1162 aa24.32■■□□□ 1.48
SDHB-203ENST00000466613 SOS2Q07890 1332 aaPredicted RBP24.32■■□□□ 1.48
SDHB-203ENST00000466613 PNPLA6Q8IY17 1366 aa24.31■■□□□ 1.48
SDHB-203ENST00000466613 ESCO1Q5FWF5 840 aa24.29■■□□□ 1.48
SDHB-203ENST00000466613 KIF1AQ12756 1690 aa24.28■■□□□ 1.48
SDHB-203ENST00000466613 NUTM2BA6NNL0 878 aaPredicted RBP24.28■■□□□ 1.48
SDHB-203ENST00000466613 NUTM2EB1AL46 878 aaPredicted RBP24.28■■□□□ 1.48
SDHB-203ENST00000466613 NUTM2AQ8IVF1 878 aaPredicted RBP24.28■■□□□ 1.48
SDHB-203ENST00000466613 RGPD8O14715 1765 aaPredicted RBP24.27■■□□□ 1.48
SDHB-203ENST00000466613 PRAM1Q96QH2 718 aa24.27■■□□□ 1.48
SDHB-203ENST00000466613 NPHP3Q7Z494 1330 aa24.27■■□□□ 1.48
SDHB-203ENST00000466613 NUTM2FA1L443 756 aa24.26■■□□□ 1.47
SDHB-203ENST00000466613 PXDNQ92626 1479 aa24.26■■□□□ 1.47
SDHB-203ENST00000466613 ADGRB2O60241 1585 aa24.25■■□□□ 1.47
SDHB-203ENST00000466613 COL22A1Q8NFW1 1626 aaPredicted RBP24.25■■□□□ 1.47
SDHB-203ENST00000466613 ZNF772Q68DY9 489 aaPredicted RBP24.23■■□□□ 1.47
SDHB-203ENST00000466613 POGKQ9P215 609 aa24.23■■□□□ 1.47
SDHB-203ENST00000466613 KIAA1210Q9ULL0 1709 aa24.23■■□□□ 1.47
SDHB-203ENST00000466613 ARHGEF28Q8N1W1 1705 aaKnown RBP24.22■■□□□ 1.47
SDHB-203ENST00000466613 SAFB2Q14151 953 aaKnown RBP eCLIP24.22■■□□□ 1.47
SDHB-203ENST00000466613 TRAK1Q9UPV9 953 aa24.22■■□□□ 1.47
SDHB-203ENST00000466613 FOXO3O43524 673 aa24.2■■□□□ 1.46
SDHB-203ENST00000466613 USP32Q8NFA0 1604 aa24.19■■□□□ 1.46
SDHB-203ENST00000466613 AFF2P51816 1311 aa24.16■■□□□ 1.46
SDHB-203ENST00000466613 XPCQ01831 940 aaPredicted RBP24.16■■□□□ 1.46
SDHB-203ENST00000466613 ANKARQ7Z5J8 1434 aa24.16■■□□□ 1.46
SDHB-203ENST00000466613 C8orf37Q96NL8 207 aa24.15■■□□□ 1.46
SDHB-203ENST00000466613 PHF8Q9UPP1 1060 aa24.14■■□□□ 1.45
SDHB-203ENST00000466613 MARF1Q9Y4F3 1742 aaKnown RBP24.14■■□□□ 1.45
SDHB-203ENST00000466613 ADAMTS2O95450 1211 aa24.13■■□□□ 1.45
SDHB-203ENST00000466613 HIRIP3Q9BW71 556 aaPredicted RBP24.12■■□□□ 1.45
SDHB-203ENST00000466613 MINK1Q8N4C8 1332 aaPredicted RBP24.11■■□□□ 1.45
SDHB-203ENST00000466613 TULP4Q9NRJ4 1543 aa24.11■■□□□ 1.45
SDHB-203ENST00000466613 EIF3AQ14152 1382 aaKnown RBP24.11■■□□□ 1.45
SDHB-203ENST00000466613 SPATA31A3Q5VYP0 1347 aa24.1■■□□□ 1.45
SDHB-203ENST00000466613 KRT28Q7Z3Y7 464 aa24.09■■□□□ 1.45
SDHB-203ENST00000466613 NGLY1Q96IV0 654 aa24.08■■□□□ 1.45
SDHB-203ENST00000466613 ITSN1Q15811 1721 aa24.07■■□□□ 1.44
SDHB-203ENST00000466613 WASLO00401 505 aaPredicted RBP24.07■■□□□ 1.44
SDHB-203ENST00000466613 RXRBP28702 533 aa24.07■■□□□ 1.44
SDHB-203ENST00000466613 TNS3Q68CZ2 1445 aa24.07■■□□□ 1.44
SDHB-203ENST00000466613 CDK12Q9NYV4 1490 aaPredicted RBP24.07■■□□□ 1.44
SDHB-203ENST00000466613 SIN3AQ96ST3 1273 aa24.06■■□□□ 1.44
SDHB-203ENST00000466613 PSME1Q06323 249 aa24.05■■□□□ 1.44
SDHB-203ENST00000466613 NBPF1Q3BBV0 1214 aa24.05■■□□□ 1.44
SDHB-203ENST00000466613 PRR36Q9H6K5 1346 aa24.05■■□□□ 1.44
SDHB-203ENST00000466613 SBNO1A3KN83 1393 aa24.04■■□□□ 1.44
SDHB-203ENST00000466613 PMFBP1Q8TBY8 1022 aa24.04■■□□□ 1.44
SDHB-203ENST00000466613 L3MBTL2Q969R5 705 aa24.04■■□□□ 1.44
SDHB-203ENST00000466613 TRPM3Q9HCF6 1732 aaPredicted RBP24.04■■□□□ 1.44
SDHB-203ENST00000466613 ABCA3Q99758 1704 aa24.02■■□□□ 1.44
SDHB-203ENST00000466613 FNBP4Q8N3X1 1017 aaPredicted RBP24.02■■□□□ 1.44
SDHB-203ENST00000466613 QTRT2Q9H974 415 aaKnown RBP24.02■■□□□ 1.44
SDHB-203ENST00000466613 TRPM1Q7Z4N2 1603 aa24.02■■□□□ 1.44
SDHB-203ENST00000466613 ATP7BP35670 1465 aa24.01■■□□□ 1.43
SDHB-203ENST00000466613 USP21Q9UK80 565 aa24.01■■□□□ 1.43
SDHB-203ENST00000466613 RBM6P78332 1123 aaKnown RBP23.99■■□□□ 1.43
SDHB-203ENST00000466613 NEUROD1Q13562 356 aa23.99■■□□□ 1.43
SDHB-203ENST00000466613 ARHGEF10O15013 1369 aa23.99■■□□□ 1.43
SDHB-203ENST00000466613 TOPAZ1Q8N9V7 1692 aa23.99■■□□□ 1.43
SDHB-203ENST00000466613 ALS2Q96Q42 1657 aa23.99■■□□□ 1.43
SDHB-203ENST00000466613 QRICH2Q9H0J4 1663 aa23.98■■□□□ 1.43
SDHB-203ENST00000466613 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.98■■□□□ 1.43
SDHB-203ENST00000466613 TRIM26Q12899 539 aaPredicted RBP23.97■■□□□ 1.43
SDHB-203ENST00000466613 GPRASP1Q5JY77 1395 aa23.97■■□□□ 1.43
SDHB-203ENST00000466613 RGS12O14924 1447 aa23.96■■□□□ 1.43
SDHB-203ENST00000466613 ATRNO75882 1429 aa23.96■■□□□ 1.43
SDHB-203ENST00000466613 TRPC5Q9UL62 973 aaPredicted RBP23.96■■□□□ 1.43
SDHB-203ENST00000466613 BCL9LQ86UU0 1499 aa23.95■■□□□ 1.42
SDHB-203ENST00000466613 NUDT16Q96DE0 195 aaKnown RBP23.95■■□□□ 1.42
SDHB-203ENST00000466613 CDK19Q9BWU1 502 aa23.95■■□□□ 1.42
SDHB-203ENST00000466613 LMOD2Q6P5Q4 547 aa23.94■■□□□ 1.42
SDHB-203ENST00000466613 CENPJQ9HC77 1338 aaPredicted RBP23.93■■□□□ 1.42
SDHB-203ENST00000466613 NGDNQ8NEJ9 315 aaKnown RBP23.93■■□□□ 1.42
SDHB-203ENST00000466613 SLIT2O94813 1529 aa23.93■■□□□ 1.42
SDHB-203ENST00000466613 HAP1P54257 671 aaPredicted RBP23.92■■□□□ 1.42
SDHB-203ENST00000466613 PLCH1Q4KWH8 1693 aa23.92■■□□□ 1.42
SDHB-203ENST00000466613 CABLES1Q8TDN4 633 aa23.91■■□□□ 1.42
SDHB-203ENST00000466613 NWD2Q9ULI1 1742 aa23.9■■□□□ 1.42
SDHB-203ENST00000466613 CRYBG1Q9Y4K1 1723 aa23.9■■□□□ 1.42
SDHB-203ENST00000466613 ROCK2O75116 1388 aaKnown RBP23.89■■□□□ 1.41
SDHB-203ENST00000466613 PLEKHG5O94827 1062 aa23.88■■□□□ 1.41
SDHB-203ENST00000466613 CCDC61Q9Y6R9 512 aa23.88■■□□□ 1.41
SDHB-203ENST00000466613 POLR3AO14802 1390 aaPredicted RBP23.87■■□□□ 1.41
SDHB-203ENST00000466613 UNC5CLQ8IV45 518 aa23.86■■□□□ 1.41
SDHB-203ENST00000466613 UPF1Q92900 1129 aaKnown RBP eCLIP23.85■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms