RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 WAPLQ7Z5K2 1190 aa14.12□□□□□ -0.15
RTFDC1-205ENST00000466260 C14orf93Q9H972 538 aaKnown RBP14.12□□□□□ -0.15
RTFDC1-205ENST00000466260 FAM135BQ49AJ0 1406 aa14.12□□□□□ -0.15
RTFDC1-205ENST00000466260 PLEKHH1Q9ULM0 1364 aa14.11□□□□□ -0.15
RTFDC1-205ENST00000466260 DCCP43146 1447 aa14.11□□□□□ -0.15
RTFDC1-205ENST00000466260 MST1RQ04912 1400 aa14.11□□□□□ -0.15
RTFDC1-205ENST00000466260 PRAG1Q86YV5 1406 aa14.1□□□□□ -0.15
RTFDC1-205ENST00000466260 RGPD8O14715 1765 aaPredicted RBP14.1□□□□□ -0.15
RTFDC1-205ENST00000466260 SAFB2Q14151 953 aaKnown RBP eCLIP14.1□□□□□ -0.15
RTFDC1-205ENST00000466260 ARHGEF28Q8N1W1 1705 aaKnown RBP14.1□□□□□ -0.15
RTFDC1-205ENST00000466260 DISP3Q9P2K9 1392 aa14.09□□□□□ -0.15
RTFDC1-205ENST00000466260 ADGRB1O14514 1584 aa14.09□□□□□ -0.15
RTFDC1-205ENST00000466260 MED1Q15648 1581 aaPredicted RBP14.09□□□□□ -0.15
RTFDC1-205ENST00000466260 FMN2Q9NZ56 1722 aa14.09□□□□□ -0.15
RTFDC1-205ENST00000466260 KIAA1210Q9ULL0 1709 aa14.09□□□□□ -0.15
RTFDC1-205ENST00000466260 CDC42BPGQ6DT37 1551 aa14.09□□□□□ -0.15
RTFDC1-205ENST00000466260 COL16A1Q07092 1604 aaPredicted RBP14.08□□□□□ -0.15
RTFDC1-205ENST00000466260 NHSL1Q5SYE7 1610 aa14.08□□□□□ -0.15
RTFDC1-205ENST00000466260 TECPR2O15040 1411 aa14.08□□□□□ -0.15
RTFDC1-205ENST00000466260 NUTM2FA1L443 756 aa14.08□□□□□ -0.16
RTFDC1-205ENST00000466260 PCGF6Q9BYE7 350 aa14.08□□□□□ -0.16
RTFDC1-205ENST00000466260 TRAK1Q9UPV9 953 aa14.08□□□□□ -0.16
RTFDC1-205ENST00000466260 ABCC11Q96J66 1382 aa14.08□□□□□ -0.16
RTFDC1-205ENST00000466260 AHDC1Q5TGY3 1603 aaPredicted RBP14.06□□□□□ -0.16
RTFDC1-205ENST00000466260 BRINP3Q76B58 766 aa14.06□□□□□ -0.16
RTFDC1-205ENST00000466260 DDX17Q92841 729 aaKnown RBP14.05□□□□□ -0.16
RTFDC1-205ENST00000466260 L3MBTL2Q969R5 705 aa14.05□□□□□ -0.16
RTFDC1-205ENST00000466260 PRAM1Q96QH2 718 aa14.05□□□□□ -0.16
RTFDC1-205ENST00000466260 POGKQ9P215 609 aa14.05□□□□□ -0.16
RTFDC1-205ENST00000466260 C1orf167Q5SNV9 1468 aa14.05□□□□□ -0.16
RTFDC1-205ENST00000466260 DLC1Q96QB1 1528 aa14.05□□□□□ -0.16
RTFDC1-205ENST00000466260 TRPM1Q7Z4N2 1603 aa14.04□□□□□ -0.16
RTFDC1-205ENST00000466260 SHPRHQ149N8 1683 aa14.02□□□□□ -0.16
RTFDC1-205ENST00000466260 STAC3Q96MF2 364 aa14.02□□□□□ -0.17
RTFDC1-205ENST00000466260 ORAI2Q96SN7 254 aa14.02□□□□□ -0.17
RTFDC1-205ENST00000466260 MINK1Q8N4C8 1332 aaPredicted RBP14.01□□□□□ -0.17
RTFDC1-205ENST00000466260 HIRIP3Q9BW71 556 aaPredicted RBP14.01□□□□□ -0.17
RTFDC1-205ENST00000466260 TONSLQ96HA7 1378 aa14□□□□□ -0.17
RTFDC1-205ENST00000466260 NBPF1Q3BBV0 1214 aa14□□□□□ -0.17
RTFDC1-205ENST00000466260 ESCO1Q5FWF5 840 aa14□□□□□ -0.17
RTFDC1-205ENST00000466260 QRICH2Q9H0J4 1663 aa14□□□□□ -0.17
RTFDC1-205ENST00000466260 ADGRB2O60241 1585 aa14□□□□□ -0.17
RTFDC1-205ENST00000466260 KIF1AQ12756 1690 aa13.99□□□□□ -0.17
RTFDC1-205ENST00000466260 USP32Q8NFA0 1604 aa13.99□□□□□ -0.17
RTFDC1-205ENST00000466260 JCADQ9P266 1359 aa13.98□□□□□ -0.17
RTFDC1-205ENST00000466260 XPCQ01831 940 aaPredicted RBP13.97□□□□□ -0.17
RTFDC1-205ENST00000466260 SIRT1Q96EB6 747 aa13.97□□□□□ -0.17
RTFDC1-205ENST00000466260 ITSN1Q15811 1721 aa13.96□□□□□ -0.17
RTFDC1-205ENST00000466260 NUTM2BA6NNL0 878 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-205ENST00000466260 NUTM2EB1AL46 878 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-205ENST00000466260 MYCNP04198 464 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-205ENST00000466260 NUTM2AQ8IVF1 878 aaPredicted RBP13.95□□□□□ -0.18
RTFDC1-205ENST00000466260 ROCK2O75116 1388 aaKnown RBP13.95□□□□□ -0.18
RTFDC1-205ENST00000466260 LRP6O75581 1613 aa13.94□□□□□ -0.18
RTFDC1-205ENST00000466260 FOXO3O43524 673 aa13.93□□□□□ -0.18
RTFDC1-205ENST00000466260 NBPF8Q3BBV2 869 aa13.93□□□□□ -0.18
RTFDC1-205ENST00000466260 MEX3CQ5U5Q3 659 aaKnown RBP13.93□□□□□ -0.18
RTFDC1-205ENST00000466260 TULP4Q9NRJ4 1543 aa13.93□□□□□ -0.18
RTFDC1-205ENST00000466260 PMFBP1Q8TBY8 1022 aa13.92□□□□□ -0.18
RTFDC1-205ENST00000466260 NPHP3Q7Z494 1330 aa13.91□□□□□ -0.18
RTFDC1-205ENST00000466260 PLEKHG5O94827 1062 aa13.91□□□□□ -0.18
RTFDC1-205ENST00000466260 ILDR2Q71H61 639 aa13.91□□□□□ -0.18
RTFDC1-205ENST00000466260 LRRC59Q96AG4 307 aaKnown RBP13.91□□□□□ -0.18
RTFDC1-205ENST00000466260 PNPLA6Q8IY17 1366 aa13.91□□□□□ -0.18
RTFDC1-205ENST00000466260 PXDNQ92626 1479 aa13.91□□□□□ -0.18
RTFDC1-205ENST00000466260 WASLO00401 505 aaPredicted RBP13.9□□□□□ -0.18
RTFDC1-205ENST00000466260 PHF8Q9UPP1 1060 aa13.9□□□□□ -0.18
RTFDC1-205ENST00000466260 TOPAZ1Q8N9V7 1692 aa13.9□□□□□ -0.18
RTFDC1-205ENST00000466260 ANKARQ7Z5J8 1434 aa13.9□□□□□ -0.19
RTFDC1-205ENST00000466260 SOS2Q07890 1332 aaPredicted RBP13.9□□□□□ -0.19
RTFDC1-205ENST00000466260 SPATA31A6Q5VVP1 1343 aa13.9□□□□□ -0.19
RTFDC1-205ENST00000466260 PRR36Q9H6K5 1346 aa13.9□□□□□ -0.19
RTFDC1-205ENST00000466260 CENPJQ9HC77 1338 aaPredicted RBP13.9□□□□□ -0.19
RTFDC1-205ENST00000466260 RALGAPBQ86X10 1494 aa13.89□□□□□ -0.19
RTFDC1-205ENST00000466260 EIF3AQ14152 1382 aaKnown RBP13.89□□□□□ -0.19
RTFDC1-205ENST00000466260 CCER1Q8TC90 406 aaPredicted RBP13.89□□□□□ -0.19
RTFDC1-205ENST00000466260 ATP7BP35670 1465 aa13.88□□□□□ -0.19
RTFDC1-205ENST00000466260 MARF1Q9Y4F3 1742 aaKnown RBP13.88□□□□□ -0.19
RTFDC1-205ENST00000466260 COL22A1Q8NFW1 1626 aaPredicted RBP13.88□□□□□ -0.19
RTFDC1-205ENST00000466260 KRT28Q7Z3Y7 464 aa13.87□□□□□ -0.19
RTFDC1-205ENST00000466260 CDK19Q9BWU1 502 aa13.87□□□□□ -0.19
RTFDC1-205ENST00000466260 CARD11Q9BXL7 1154 aa13.87□□□□□ -0.19
RTFDC1-205ENST00000466260 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-205ENST00000466260 ABCA3Q99758 1704 aa13.87□□□□□ -0.19
RTFDC1-205ENST00000466260 TRPM3Q9HCF6 1732 aaPredicted RBP13.87□□□□□ -0.19
RTFDC1-205ENST00000466260 ADAMTS2O95450 1211 aa13.86□□□□□ -0.19
RTFDC1-205ENST00000466260 SRPK2P78362 688 aaKnown RBP13.86□□□□□ -0.19
RTFDC1-205ENST00000466260 LMOD2Q6P5Q4 547 aa13.86□□□□□ -0.19
RTFDC1-205ENST00000466260 PSME1Q06323 249 aa13.85□□□□□ -0.19
RTFDC1-205ENST00000466260 NUDT16Q96DE0 195 aaKnown RBP13.85□□□□□ -0.19
RTFDC1-205ENST00000466260 NGDNQ8NEJ9 315 aaKnown RBP13.84□□□□□ -0.19
RTFDC1-205ENST00000466260 C8orf37Q96NL8 207 aa13.84□□□□□ -0.19
RTFDC1-205ENST00000466260 CABP2Q9NPB3 220 aa13.84□□□□□ -0.19
RTFDC1-205ENST00000466260 TNS3Q68CZ2 1445 aa13.83□□□□□ -0.2
RTFDC1-205ENST00000466260 ALS2Q96Q42 1657 aa13.83□□□□□ -0.2
RTFDC1-205ENST00000466260 RGS17Q9UGC6 210 aaPredicted RBP13.83□□□□□ -0.2
RTFDC1-205ENST00000466260 GPRASP1Q5JY77 1395 aa13.83□□□□□ -0.2
RTFDC1-205ENST00000466260 HAP1P54257 671 aaPredicted RBP13.82□□□□□ -0.2
RTFDC1-205ENST00000466260 SPATA31A3Q5VYP0 1347 aa13.82□□□□□ -0.2
RTFDC1-205ENST00000466260 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms