RNA–Protein interactions for RNA: ENST00000465312.5

SCAMP3-204, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 5

Gene SCAMP3, Length 715 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-204ENST00000465312 FAM135BQ49AJ0 1406 aa26.29■■□□□ 1.8
SCAMP3-204ENST00000465312 ADGRL3Q9HAR2 1447 aa26.29■■□□□ 1.8
SCAMP3-204ENST00000465312 ARHGEF28Q8N1W1 1705 aaKnown RBP26.28■■□□□ 1.8
SCAMP3-204ENST00000465312 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.28■■□□□ 1.8
SCAMP3-204ENST00000465312 SIRT1Q96EB6 747 aa26.25■■□□□ 1.79
SCAMP3-204ENST00000465312 CADPS2Q86UW7 1296 aa26.24■■□□□ 1.79
SCAMP3-204ENST00000465312 EIF3AQ14152 1382 aaKnown RBP26.23■■□□□ 1.79
SCAMP3-204ENST00000465312 MINK1Q8N4C8 1332 aaPredicted RBP26.23■■□□□ 1.79
SCAMP3-204ENST00000465312 FBXO41Q8TF61 875 aa26.23■■□□□ 1.79
SCAMP3-204ENST00000465312 HIRIP3Q9BW71 556 aaPredicted RBP26.21■■□□□ 1.79
SCAMP3-204ENST00000465312 DCCP43146 1447 aa26.2■■□□□ 1.78
SCAMP3-204ENST00000465312 GPRASP1Q5JY77 1395 aa26.2■■□□□ 1.78
SCAMP3-204ENST00000465312 CENPJQ9HC77 1338 aaPredicted RBP26.19■■□□□ 1.78
SCAMP3-204ENST00000465312 NUTM2FA1L443 756 aa26.17■■□□□ 1.78
SCAMP3-204ENST00000465312 SLAIN2Q9P270 581 aa26.17■■□□□ 1.78
SCAMP3-204ENST00000465312 CDC42BPGQ6DT37 1551 aa26.16■■□□□ 1.78
SCAMP3-204ENST00000465312 QRICH2Q9H0J4 1663 aa26.16■■□□□ 1.78
SCAMP3-204ENST00000465312 MST1RQ04912 1400 aa26.11■■□□□ 1.77
SCAMP3-204ENST00000465312 ADGRB2O60241 1585 aa26.1■■□□□ 1.77
SCAMP3-204ENST00000465312 ROBO1Q9Y6N7 1651 aa26.09■■□□□ 1.77
SCAMP3-204ENST00000465312 FMN2Q9NZ56 1722 aa26.09■■□□□ 1.77
SCAMP3-204ENST00000465312 USP47Q96K76 1375 aa26.08■■□□□ 1.77
SCAMP3-204ENST00000465312 C1orf167Q5SNV9 1468 aa26.07■■□□□ 1.76
SCAMP3-204ENST00000465312 WASLO00401 505 aaPredicted RBP26.07■■□□□ 1.76
SCAMP3-204ENST00000465312 ESCO1Q5FWF5 840 aa26.06■■□□□ 1.76
SCAMP3-204ENST00000465312 ILDR1Q86SU0 546 aaPredicted RBP26.06■■□□□ 1.76
SCAMP3-204ENST00000465312 SRPK2P78362 688 aaKnown RBP26.05■■□□□ 1.76
SCAMP3-204ENST00000465312 CDK19Q9BWU1 502 aa26.04■■□□□ 1.76
SCAMP3-204ENST00000465312 ST20-MTHFSA0A0A6YYL1 179 aa26.03■■□□□ 1.76
SCAMP3-204ENST00000465312 BRINP3Q76B58 766 aa26.02■■□□□ 1.76
SCAMP3-204ENST00000465312 ORAI2Q96SN7 254 aa26.02■■□□□ 1.76
SCAMP3-204ENST00000465312 EVC2Q86UK5 1308 aa26.02■■□□□ 1.76
SCAMP3-204ENST00000465312 TULP4Q9NRJ4 1543 aa26.01■■□□□ 1.75
SCAMP3-204ENST00000465312 RGPD8O14715 1765 aaPredicted RBP26■■□□□ 1.75
SCAMP3-204ENST00000465312 ANKARQ7Z5J8 1434 aa25.98■■□□□ 1.75
SCAMP3-204ENST00000465312 EIF4G2P78344 907 aaKnown RBP eCLIP25.98■■□□□ 1.75
SCAMP3-204ENST00000465312 CABP2Q9NPB3 220 aa25.98■■□□□ 1.75
SCAMP3-204ENST00000465312 HSPA1LP34931 641 aa25.97■■□□□ 1.75
SCAMP3-204ENST00000465312 NUDT16Q96DE0 195 aaKnown RBP25.96■■□□□ 1.75
SCAMP3-204ENST00000465312 PHLPP1O60346 1717 aa25.96■■□□□ 1.75
SCAMP3-204ENST00000465312 USP32Q8NFA0 1604 aa25.95■■□□□ 1.74
SCAMP3-204ENST00000465312 ITSN1Q15811 1721 aa25.94■■□□□ 1.74
SCAMP3-204ENST00000465312 PMFBP1Q8TBY8 1022 aa25.94■■□□□ 1.74
SCAMP3-204ENST00000465312 DDX17Q92841 729 aaKnown RBP25.94■■□□□ 1.74
SCAMP3-204ENST00000465312 PHF8Q9UPP1 1060 aa25.94■■□□□ 1.74
SCAMP3-204ENST00000465312 SBNO2Q9Y2G9 1366 aa25.94■■□□□ 1.74
SCAMP3-204ENST00000465312 KIF1AQ12756 1690 aa25.93■■□□□ 1.74
SCAMP3-204ENST00000465312 PRR36Q9H6K5 1346 aa25.93■■□□□ 1.74
SCAMP3-204ENST00000465312 ATP7BP35670 1465 aa25.92■■□□□ 1.74
SCAMP3-204ENST00000465312 HSPA5P11021 654 aaKnown RBP25.92■■□□□ 1.74
SCAMP3-204ENST00000465312 FOXO3O43524 673 aa25.91■■□□□ 1.74
SCAMP3-204ENST00000465312 SLC24A1O60721 1099 aa25.91■■□□□ 1.74
SCAMP3-204ENST00000465312 ZEB1P37275 1124 aaPredicted RBP25.91■■□□□ 1.74
SCAMP3-204ENST00000465312 TMF1P82094 1093 aa25.91■■□□□ 1.74
SCAMP3-204ENST00000465312 NGDNQ8NEJ9 315 aaKnown RBP25.9■■□□□ 1.74
SCAMP3-204ENST00000465312 NPHP3Q7Z494 1330 aa25.89■■□□□ 1.74
SCAMP3-204ENST00000465312 NHSL1Q5SYE7 1610 aa25.89■■□□□ 1.74
SCAMP3-204ENST00000465312 AHDC1Q5TGY3 1603 aaPredicted RBP25.89■■□□□ 1.74
SCAMP3-204ENST00000465312 XPCQ01831 940 aaPredicted RBP25.89■■□□□ 1.74
SCAMP3-204ENST00000465312 TESK2Q96S53 571 aa25.88■■□□□ 1.73
SCAMP3-204ENST00000465312 CCDC61Q9Y6R9 512 aa25.88■■□□□ 1.73
SCAMP3-204ENST00000465312 PPIP5K1Q6PFW1 1433 aa25.88■■□□□ 1.73
SCAMP3-204ENST00000465312 POLR3GLQ9BT43 218 aa25.87■■□□□ 1.73
SCAMP3-204ENST00000465312 ATAD2Q6PL18 1390 aa25.86■■□□□ 1.73
SCAMP3-204ENST00000465312 PSME1Q06323 249 aa25.86■■□□□ 1.73
SCAMP3-204ENST00000465312 TOPAZ1Q8N9V7 1692 aa25.85■■□□□ 1.73
SCAMP3-204ENST00000465312 TMC1Q8TDI8 760 aa25.85■■□□□ 1.73
SCAMP3-204ENST00000465312 DISP3Q9P2K9 1392 aa25.83■■□□□ 1.73
SCAMP3-204ENST00000465312 COL16A1Q07092 1604 aaPredicted RBP25.83■■□□□ 1.73
SCAMP3-204ENST00000465312 CDCA8Q53HL2 280 aa25.82■■□□□ 1.72
SCAMP3-204ENST00000465312 KRT28Q7Z3Y7 464 aa25.82■■□□□ 1.72
SCAMP3-204ENST00000465312 CABP1Q9NZU7 370 aa25.82■■□□□ 1.72
SCAMP3-204ENST00000465312 LMOD2Q6P5Q4 547 aa25.8■■□□□ 1.72
SCAMP3-204ENST00000465312 ACEP12821 1306 aa25.8■■□□□ 1.72
SCAMP3-204ENST00000465312 LRRC59Q96AG4 307 aaKnown RBP25.79■■□□□ 1.72
SCAMP3-204ENST00000465312 PAK3O75914 559 aaPredicted RBP25.78■■□□□ 1.72
SCAMP3-204ENST00000465312 SOS2Q07890 1332 aaPredicted RBP25.77■■□□□ 1.72
SCAMP3-204ENST00000465312 PXDNQ92626 1479 aa25.77■■□□□ 1.72
SCAMP3-204ENST00000465312 PLEKHG3A1L390 1219 aa25.76■■□□□ 1.71
SCAMP3-204ENST00000465312 JCADQ9P266 1359 aa25.75■■□□□ 1.71
SCAMP3-204ENST00000465312 PLEKHG5O94827 1062 aa25.75■■□□□ 1.71
SCAMP3-204ENST00000465312 PUS7Q96PZ0 661 aaKnown RBP25.73■■□□□ 1.71
SCAMP3-204ENST00000465312 POLR3AO14802 1390 aaPredicted RBP25.72■■□□□ 1.71
SCAMP3-204ENST00000465312 HDGFL2Q7Z4V5 671 aaPredicted RBP25.72■■□□□ 1.71
SCAMP3-204ENST00000465312 SLC12A5Q9H2X9 1139 aa25.71■■□□□ 1.71
SCAMP3-204ENST00000465312 TNS3Q68CZ2 1445 aa25.7■■□□□ 1.7
SCAMP3-204ENST00000465312 NUTM2BA6NNL0 878 aaPredicted RBP25.69■■□□□ 1.7
SCAMP3-204ENST00000465312 NUTM2EB1AL46 878 aaPredicted RBP25.69■■□□□ 1.7
SCAMP3-204ENST00000465312 NUTM2AQ8IVF1 878 aaPredicted RBP25.69■■□□□ 1.7
SCAMP3-204ENST00000465312 TERF2IPQ9NYB0 399 aa25.69■■□□□ 1.7
SCAMP3-204ENST00000465312 KTN1Q86UP2 1357 aaKnown RBP25.69■■□□□ 1.7
SCAMP3-204ENST00000465312 NINLQ9Y2I6 1382 aa25.69■■□□□ 1.7
SCAMP3-204ENST00000465312 SHPRHQ149N8 1683 aa25.68■■□□□ 1.7
SCAMP3-204ENST00000465312 SBNO1A3KN83 1393 aa25.68■■□□□ 1.7
SCAMP3-204ENST00000465312 PNPLA6Q8IY17 1366 aa25.68■■□□□ 1.7
SCAMP3-204ENST00000465312 SPATA31A3Q5VYP0 1347 aa25.67■■□□□ 1.7
SCAMP3-204ENST00000465312 HAP1P54257 671 aaPredicted RBP25.67■■□□□ 1.7
SCAMP3-204ENST00000465312 ZNF692Q9BU19 519 aaPredicted RBP25.67■■□□□ 1.7
SCAMP3-204ENST00000465312 TRPM3Q9HCF6 1732 aaPredicted RBP25.66■■□□□ 1.7
SCAMP3-204ENST00000465312 AKAP12Q02952 1782 aa25.66■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms