RNA–Protein interactions for RNA: ENST00000465155.5

ATF3-208, Transcript of activating transcription factor 3, humanhuman

TSL 2

Gene ATF3, Length 1,626 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATF3-208ENST00000465155 STRCP1A6NGW2 1772 aa18.7■□□□□ 0.58
ATF3-208ENST00000465155 TMF1P82094 1093 aa18.7■□□□□ 0.58
ATF3-208ENST00000465155 DISP3Q9P2K9 1392 aa18.69■□□□□ 0.58
ATF3-208ENST00000465155 MINK1Q8N4C8 1332 aaPredicted RBP18.69■□□□□ 0.58
ATF3-208ENST00000465155 SLC24A1O60721 1099 aa18.68■□□□□ 0.58
ATF3-208ENST00000465155 WASHC2AQ641Q2 1341 aa18.68■□□□□ 0.58
ATF3-208ENST00000465155 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.67■□□□□ 0.58
ATF3-208ENST00000465155 KIF7Q2M1P5 1343 aa18.67■□□□□ 0.58
ATF3-208ENST00000465155 CCDC7Q96M83 1385 aa18.67■□□□□ 0.58
ATF3-208ENST00000465155 POLR3GLQ9BT43 218 aa18.66■□□□□ 0.58
ATF3-208ENST00000465155 NKTRP30414 1462 aaKnown RBP18.66■□□□□ 0.58
ATF3-208ENST00000465155 TULP4Q9NRJ4 1543 aa18.66■□□□□ 0.58
ATF3-208ENST00000465155 EVC2Q86UK5 1308 aa18.64■□□□□ 0.57
ATF3-208ENST00000465155 ZNF335Q9H4Z2 1342 aaPredicted RBP18.63■□□□□ 0.57
ATF3-208ENST00000465155 ADGRB2O60241 1585 aa18.63■□□□□ 0.57
ATF3-208ENST00000465155 CDCA8Q53HL2 280 aa18.63■□□□□ 0.57
ATF3-208ENST00000465155 NALCNQ8IZF0 1738 aa18.62■□□□□ 0.57
ATF3-208ENST00000465155 PROSER2Q86WR7 435 aaPredicted RBP18.62■□□□□ 0.57
ATF3-208ENST00000465155 RBM33Q96EV2 1170 aaKnown RBP18.62■□□□□ 0.57
ATF3-208ENST00000465155 SCAF1Q9H7N4 1312 aaKnown RBP18.61■□□□□ 0.57
ATF3-208ENST00000465155 SRPK2P78362 688 aaKnown RBP18.59■□□□□ 0.57
ATF3-208ENST00000465155 CDK19Q9BWU1 502 aa18.59■□□□□ 0.57
ATF3-208ENST00000465155 WASLO00401 505 aaPredicted RBP18.58■□□□□ 0.56
ATF3-208ENST00000465155 DDX10Q13206 875 aaKnown RBP18.58■□□□□ 0.56
ATF3-208ENST00000465155 CABP2Q9NPB3 220 aa18.58■□□□□ 0.56
ATF3-208ENST00000465155 MYOM1P52179 1685 aa18.57■□□□□ 0.56
ATF3-208ENST00000465155 C14orf37Q86TY3 774 aa18.57■□□□□ 0.56
ATF3-208ENST00000465155 ADGRL3Q9HAR2 1447 aa18.57■□□□□ 0.56
ATF3-208ENST00000465155 XIRP1Q702N8 1843 aaKnown RBP18.57■□□□□ 0.56
ATF3-208ENST00000465155 TMEM94Q12767 1356 aa18.56■□□□□ 0.56
ATF3-208ENST00000465155 PPP4R3CPQ6ZMV5 832 aa18.56■□□□□ 0.56
ATF3-208ENST00000465155 PUS7Q96PZ0 661 aaKnown RBP18.55■□□□□ 0.56
ATF3-208ENST00000465155 CDC42BPGQ6DT37 1551 aa18.55■□□□□ 0.56
ATF3-208ENST00000465155 LRRC7Q96NW7 1537 aa18.54■□□□□ 0.56
ATF3-208ENST00000465155 FMN2Q9NZ56 1722 aa18.53■□□□□ 0.56
ATF3-208ENST00000465155 NCOA3Q9Y6Q9 1424 aa18.53■□□□□ 0.56
ATF3-208ENST00000465155 ATAD2Q6PL18 1390 aa18.53■□□□□ 0.56
ATF3-208ENST00000465155 NUTM2FA1L443 756 aa18.51■□□□□ 0.55
ATF3-208ENST00000465155 TMC1Q8TDI8 760 aa18.51■□□□□ 0.55
ATF3-208ENST00000465155 RGPD8O14715 1765 aaPredicted RBP18.51■□□□□ 0.55
ATF3-208ENST00000465155 USP32Q8NFA0 1604 aa18.51■□□□□ 0.55
ATF3-208ENST00000465155 ATP7BP35670 1465 aa18.5■□□□□ 0.55
ATF3-208ENST00000465155 NUDT16Q96DE0 195 aaKnown RBP18.5■□□□□ 0.55
ATF3-208ENST00000465155 C19orf44Q9H6X5 657 aa18.5■□□□□ 0.55
ATF3-208ENST00000465155 LTBP4Q8N2S1 1624 aa18.49■□□□□ 0.55
ATF3-208ENST00000465155 PRR36Q9H6K5 1346 aa18.49■□□□□ 0.55
ATF3-208ENST00000465155 ITSN1Q15811 1721 aa18.49■□□□□ 0.55
ATF3-208ENST00000465155 DIEXFQ68CQ4 756 aaKnown RBP18.49■□□□□ 0.55
ATF3-208ENST00000465155 TOPAZ1Q8N9V7 1692 aa18.48■□□□□ 0.55
ATF3-208ENST00000465155 SLC12A5Q9H2X9 1139 aa18.48■□□□□ 0.55
ATF3-208ENST00000465155 MSH6P52701 1360 aa18.47■□□□□ 0.55
ATF3-208ENST00000465155 NINLQ9Y2I6 1382 aa18.47■□□□□ 0.55
ATF3-208ENST00000465155 PPIP5K1Q6PFW1 1433 aa18.47■□□□□ 0.55
ATF3-208ENST00000465155 DCCP43146 1447 aa18.46■□□□□ 0.55
ATF3-208ENST00000465155 ANKARQ7Z5J8 1434 aa18.46■□□□□ 0.55
ATF3-208ENST00000465155 PANK3Q9H999 370 aa18.46■□□□□ 0.55
ATF3-208ENST00000465155 CCDC61Q9Y6R9 512 aa18.46■□□□□ 0.55
ATF3-208ENST00000465155 CABP1Q9NZU7 370 aa18.45■□□□□ 0.54
ATF3-208ENST00000465155 ATF3P18847 181 aa18.45■□□□□ 0.54
ATF3-208ENST00000465155 MAPK8IP2Q13387 824 aaPredicted RBP18.45■□□□□ 0.54
ATF3-208ENST00000465155 CADPS2Q86UW7 1296 aa18.42■□□□□ 0.54
ATF3-208ENST00000465155 ANKRD36BQ8N2N9 1353 aa18.42■□□□□ 0.54
ATF3-208ENST00000465155 CD163L1Q9NR16 1453 aa18.41■□□□□ 0.54
ATF3-208ENST00000465155 AKAP12Q02952 1782 aa18.41■□□□□ 0.54
ATF3-208ENST00000465155 TERF2IPQ9NYB0 399 aa18.41■□□□□ 0.54
ATF3-208ENST00000465155 MST1RQ04912 1400 aa18.4■□□□□ 0.54
ATF3-208ENST00000465155 A0A1W2PP64 1363 aa18.4■□□□□ 0.54
ATF3-208ENST00000465155 C1orf167Q5SNV9 1468 aa18.39■□□□□ 0.54
ATF3-208ENST00000465155 HDGFL2Q7Z4V5 671 aaPredicted RBP18.39■□□□□ 0.53
ATF3-208ENST00000465155 POTEDQ86YR6 584 aa18.39■□□□□ 0.53
ATF3-208ENST00000465155 PLEKHG3A1L390 1219 aa18.38■□□□□ 0.53
ATF3-208ENST00000465155 PER1O15534 1290 aaPredicted RBP18.38■□□□□ 0.53
ATF3-208ENST00000465155 ESCO1Q5FWF5 840 aa18.38■□□□□ 0.53
ATF3-208ENST00000465155 PMFBP1Q8TBY8 1022 aa18.38■□□□□ 0.53
ATF3-208ENST00000465155 CARD14Q9BXL6 1004 aa18.38■□□□□ 0.53
ATF3-208ENST00000465155 MON2Q7Z3U7 1717 aa18.37■□□□□ 0.53
ATF3-208ENST00000465155 CPSF1Q10570 1443 aaKnown RBP18.37■□□□□ 0.53
ATF3-208ENST00000465155 ACEP12821 1306 aa18.37■□□□□ 0.53
ATF3-208ENST00000465155 KNSTRNQ9Y448 316 aa18.37■□□□□ 0.53
ATF3-208ENST00000465155 NSD3Q9BZ95 1437 aa18.37■□□□□ 0.53
ATF3-208ENST00000465155 ORAI2Q96SN7 254 aa18.36■□□□□ 0.53
ATF3-208ENST00000465155 PHF8Q9UPP1 1060 aa18.36■□□□□ 0.53
ATF3-208ENST00000465155 KTN1Q86UP2 1357 aaKnown RBP18.36■□□□□ 0.53
ATF3-208ENST00000465155 KIF1AQ12756 1690 aa18.35■□□□□ 0.53
ATF3-208ENST00000465155 NGDNQ8NEJ9 315 aaKnown RBP18.35■□□□□ 0.53
ATF3-208ENST00000465155 POLR3AO14802 1390 aaPredicted RBP18.35■□□□□ 0.53
ATF3-208ENST00000465155 CNGB1Q14028 1251 aaPredicted RBP18.34■□□□□ 0.53
ATF3-208ENST00000465155 ZNF692Q9BU19 519 aaPredicted RBP18.34■□□□□ 0.53
ATF3-208ENST00000465155 SLAIN2Q9P270 581 aa18.33■□□□□ 0.52
ATF3-208ENST00000465155 NRKQ7Z2Y5 1582 aa18.32■□□□□ 0.52
ATF3-208ENST00000465155 ANP32CO43423 234 aa18.31■□□□□ 0.52
ATF3-208ENST00000465155 USP6P35125 1406 aa18.31■□□□□ 0.52
ATF3-208ENST00000465155 EDC4Q6P2E9 1401 aaKnown RBP18.31■□□□□ 0.52
ATF3-208ENST00000465155 AMER1Q5JTC6 1135 aaPredicted RBP18.31■□□□□ 0.52
ATF3-208ENST00000465155 KIF20BQ96Q89 1820 aa18.3■□□□□ 0.52
ATF3-208ENST00000465155 CGNL1Q0VF96 1302 aa18.3■□□□□ 0.52
ATF3-208ENST00000465155 CC2D1BQ5T0F9 858 aaKnown RBP18.3■□□□□ 0.52
ATF3-208ENST00000465155 FOXO3O43524 673 aa18.28■□□□□ 0.52
ATF3-208ENST00000465155 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.28■□□□□ 0.52
ATF3-208ENST00000465155 PSME1Q06323 249 aa18.27■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms