RNA–Protein interactions for RNA: ENST00000465074.1

XRN1-204, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 3

Gene XRN1, Length 643 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-204ENST00000465074 JCADQ9P266 1359 aa17.7■□□□□ 0.42
XRN1-204ENST00000465074 ORAI2Q96SN7 254 aa17.7■□□□□ 0.42
XRN1-204ENST00000465074 AHDC1Q5TGY3 1603 aaPredicted RBP17.69■□□□□ 0.42
XRN1-204ENST00000465074 POGKQ9P215 609 aa17.69■□□□□ 0.42
XRN1-204ENST00000465074 C1orf167Q5SNV9 1468 aa17.69■□□□□ 0.42
XRN1-204ENST00000465074 NUTM2BA6NNL0 878 aaPredicted RBP17.68■□□□□ 0.42
XRN1-204ENST00000465074 NUTM2EB1AL46 878 aaPredicted RBP17.68■□□□□ 0.42
XRN1-204ENST00000465074 TRIM26Q12899 539 aaPredicted RBP17.68■□□□□ 0.42
XRN1-204ENST00000465074 NEUROD1Q13562 356 aa17.68■□□□□ 0.42
XRN1-204ENST00000465074 ESCO1Q5FWF5 840 aa17.68■□□□□ 0.42
XRN1-204ENST00000465074 PRAG1Q86YV5 1406 aa17.68■□□□□ 0.42
XRN1-204ENST00000465074 NUTM2AQ8IVF1 878 aaPredicted RBP17.68■□□□□ 0.42
XRN1-204ENST00000465074 TRAK1Q9UPV9 953 aa17.68■□□□□ 0.42
XRN1-204ENST00000465074 TECPR2O15040 1411 aa17.67■□□□□ 0.42
XRN1-204ENST00000465074 MEX3CQ5U5Q3 659 aaKnown RBP17.67■□□□□ 0.42
XRN1-204ENST00000465074 PRAM1Q96QH2 718 aa17.67■□□□□ 0.42
XRN1-204ENST00000465074 NHSL1Q5SYE7 1610 aa17.66■□□□□ 0.42
XRN1-204ENST00000465074 SIN3AQ96ST3 1273 aa17.66■□□□□ 0.42
XRN1-204ENST00000465074 LRRC59Q96AG4 307 aaKnown RBP17.64■□□□□ 0.41
XRN1-204ENST00000465074 STAC3Q96MF2 364 aa17.64■□□□□ 0.41
XRN1-204ENST00000465074 CDC42BPGQ6DT37 1551 aa17.64■□□□□ 0.41
XRN1-204ENST00000465074 SHPRHQ149N8 1683 aa17.62■□□□□ 0.41
XRN1-204ENST00000465074 XPCQ01831 940 aaPredicted RBP17.62■□□□□ 0.41
XRN1-204ENST00000465074 SIRT1Q96EB6 747 aa17.62■□□□□ 0.41
XRN1-204ENST00000465074 HIRIP3Q9BW71 556 aaPredicted RBP17.62■□□□□ 0.41
XRN1-204ENST00000465074 SPATA31A6Q5VVP1 1343 aa17.61■□□□□ 0.41
XRN1-204ENST00000465074 MINK1Q8N4C8 1332 aaPredicted RBP17.61■□□□□ 0.41
XRN1-204ENST00000465074 FMN2Q9NZ56 1722 aa17.61■□□□□ 0.41
XRN1-204ENST00000465074 RGPD8O14715 1765 aaPredicted RBP17.61■□□□□ 0.41
XRN1-204ENST00000465074 FOXO3O43524 673 aa17.6■□□□□ 0.41
XRN1-204ENST00000465074 ADGRB1O14514 1584 aa17.6■□□□□ 0.41
XRN1-204ENST00000465074 RGS17Q9UGC6 210 aaPredicted RBP17.59■□□□□ 0.41
XRN1-204ENST00000465074 SOCS7O14512 581 aa17.58■□□□□ 0.4
XRN1-204ENST00000465074 L3MBTL2Q969R5 705 aa17.58■□□□□ 0.4
XRN1-204ENST00000465074 LRP6O75581 1613 aa17.58■□□□□ 0.4
XRN1-204ENST00000465074 DLC1Q96QB1 1528 aa17.57■□□□□ 0.4
XRN1-204ENST00000465074 NPHP3Q7Z494 1330 aa17.56■□□□□ 0.4
XRN1-204ENST00000465074 NBPF1Q3BBV0 1214 aa17.56■□□□□ 0.4
XRN1-204ENST00000465074 PLEKHG5O94827 1062 aa17.55■□□□□ 0.4
XRN1-204ENST00000465074 POTEAQ6S8J7 498 aa17.55■□□□□ 0.4
XRN1-204ENST00000465074 PNPLA6Q8IY17 1366 aa17.54■□□□□ 0.4
XRN1-204ENST00000465074 SOS2Q07890 1332 aaPredicted RBP17.54■□□□□ 0.4
XRN1-204ENST00000465074 ADAMTS2O95450 1211 aa17.54■□□□□ 0.4
XRN1-204ENST00000465074 ARHGEF28Q8N1W1 1705 aaKnown RBP17.53■□□□□ 0.4
XRN1-204ENST00000465074 PMFBP1Q8TBY8 1022 aa17.53■□□□□ 0.4
XRN1-204ENST00000465074 PHF8Q9UPP1 1060 aa17.53■□□□□ 0.4
XRN1-204ENST00000465074 KIAA1210Q9ULL0 1709 aa17.52■□□□□ 0.4
XRN1-204ENST00000465074 C8orf37Q96NL8 207 aa17.52■□□□□ 0.4
XRN1-204ENST00000465074 KIF1AQ12756 1690 aa17.52■□□□□ 0.39
XRN1-204ENST00000465074 LMOD2Q6P5Q4 547 aa17.51■□□□□ 0.39
XRN1-204ENST00000465074 KRT28Q7Z3Y7 464 aa17.51■□□□□ 0.39
XRN1-204ENST00000465074 PSME1Q06323 249 aa17.5■□□□□ 0.39
XRN1-204ENST00000465074 PXDNQ92626 1479 aa17.5■□□□□ 0.39
XRN1-204ENST00000465074 WASLO00401 505 aaPredicted RBP17.49■□□□□ 0.39
XRN1-204ENST00000465074 NGLY1Q96IV0 654 aa17.49■□□□□ 0.39
XRN1-204ENST00000465074 AFF2P51816 1311 aa17.48■□□□□ 0.39
XRN1-204ENST00000465074 USP32Q8NFA0 1604 aa17.48■□□□□ 0.39
XRN1-204ENST00000465074 ZNF772Q68DY9 489 aaPredicted RBP17.48■□□□□ 0.39
XRN1-204ENST00000465074 ADGRB2O60241 1585 aa17.48■□□□□ 0.39
XRN1-204ENST00000465074 EIF3AQ14152 1382 aaKnown RBP17.46■□□□□ 0.39
XRN1-204ENST00000465074 CDK19Q9BWU1 502 aa17.46■□□□□ 0.39
XRN1-204ENST00000465074 TONSLQ96HA7 1378 aa17.45■□□□□ 0.38
XRN1-204ENST00000465074 HAP1P54257 671 aaPredicted RBP17.45■□□□□ 0.38
XRN1-204ENST00000465074 NGDNQ8NEJ9 315 aaKnown RBP17.45■□□□□ 0.38
XRN1-204ENST00000465074 ANKARQ7Z5J8 1434 aa17.45■□□□□ 0.38
XRN1-204ENST00000465074 PRR36Q9H6K5 1346 aa17.45■□□□□ 0.38
XRN1-204ENST00000465074 TRPM1Q7Z4N2 1603 aa17.44■□□□□ 0.38
XRN1-204ENST00000465074 TULP4Q9NRJ4 1543 aa17.44■□□□□ 0.38
XRN1-204ENST00000465074 NUDT16Q96DE0 195 aaKnown RBP17.44■□□□□ 0.38
XRN1-204ENST00000465074 PCGF6Q9BYE7 350 aa17.44■□□□□ 0.38
XRN1-204ENST00000465074 SPATA31A3Q5VYP0 1347 aa17.44■□□□□ 0.38
XRN1-204ENST00000465074 ROCK2O75116 1388 aaKnown RBP17.43■□□□□ 0.38
XRN1-204ENST00000465074 CENPJQ9HC77 1338 aaPredicted RBP17.43■□□□□ 0.38
XRN1-204ENST00000465074 COL22A1Q8NFW1 1626 aaPredicted RBP17.43■□□□□ 0.38
XRN1-204ENST00000465074 PAK3O75914 559 aaPredicted RBP17.42■□□□□ 0.38
XRN1-204ENST00000465074 SRPK2P78362 688 aaKnown RBP17.42■□□□□ 0.38
XRN1-204ENST00000465074 CABLES1Q8TDN4 633 aa17.42■□□□□ 0.38
XRN1-204ENST00000465074 QRICH2Q9H0J4 1663 aa17.42■□□□□ 0.38
XRN1-204ENST00000465074 GPRASP1Q5JY77 1395 aa17.41■□□□□ 0.38
XRN1-204ENST00000465074 NBPF8Q3BBV2 869 aa17.41■□□□□ 0.38
XRN1-204ENST00000465074 QTRT2Q9H974 415 aaKnown RBP17.41■□□□□ 0.38
XRN1-204ENST00000465074 ITSN1Q15811 1721 aa17.41■□□□□ 0.38
XRN1-204ENST00000465074 RXRBP28702 533 aa17.4■□□□□ 0.38
XRN1-204ENST00000465074 TNS3Q68CZ2 1445 aa17.39■□□□□ 0.38
XRN1-204ENST00000465074 USP21Q9UK80 565 aa17.39■□□□□ 0.37
XRN1-204ENST00000465074 MARF1Q9Y4F3 1742 aaKnown RBP17.38■□□□□ 0.37
XRN1-204ENST00000465074 CABP2Q9NPB3 220 aa17.38■□□□□ 0.37
XRN1-204ENST00000465074 SBNO1A3KN83 1393 aa17.37■□□□□ 0.37
XRN1-204ENST00000465074 ATP7BP35670 1465 aa17.37■□□□□ 0.37
XRN1-204ENST00000465074 CARD11Q9BXL7 1154 aa17.36■□□□□ 0.37
XRN1-204ENST00000465074 CCDC61Q9Y6R9 512 aa17.35■□□□□ 0.37
XRN1-204ENST00000465074 ARHGEF10O15013 1369 aa17.35■□□□□ 0.37
XRN1-204ENST00000465074 ACEP12821 1306 aa17.34■□□□□ 0.37
XRN1-204ENST00000465074 TRPM3Q9HCF6 1732 aaPredicted RBP17.34■□□□□ 0.37
XRN1-204ENST00000465074 NUTM2GQ5VZR2 741 aa17.33■□□□□ 0.36
XRN1-204ENST00000465074 EVC2Q86UK5 1308 aa17.32■□□□□ 0.36
XRN1-204ENST00000465074 RBM6P78332 1123 aaKnown RBP17.32■□□□□ 0.36
XRN1-204ENST00000465074 FNBP4Q8N3X1 1017 aaPredicted RBP17.32■□□□□ 0.36
XRN1-204ENST00000465074 TOPAZ1Q8N9V7 1692 aa17.32■□□□□ 0.36
XRN1-204ENST00000465074 PPIP5K1Q6PFW1 1433 aa17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms